RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 ERC2-IT1O76042 136 aa12.02□□□□□ -0.49
SPAST-202ENST00000345662 M0R2N4 97 aa12.01□□□□□ -0.49
SPAST-202ENST00000345662 KLK9Q2XQG4 91 aa12.01□□□□□ -0.49
SPAST-202ENST00000345662 Q8NBF4 154 aa12.01□□□□□ -0.49
SPAST-202ENST00000345662 CIRBP-AS1Q8TBR5 109 aa12.01□□□□□ -0.49
SPAST-202ENST00000345662 CEP295Q9C0D2 2601 aa12.01□□□□□ -0.49
SPAST-202ENST00000345662 TP53AIP1Q9HCN2 124 aa12□□□□□ -0.49
SPAST-202ENST00000345662 EIF4EBP3O60516 100 aaPredicted RBP11.99□□□□□ -0.49
SPAST-202ENST00000345662 PKD1L2Q7Z442 2459 aa11.98□□□□□ -0.49
SPAST-202ENST00000345662 KRTAP10-9P60411 292 aa11.98□□□□□ -0.49
SPAST-202ENST00000345662 KLKP1Q107X0 134 aa11.98□□□□□ -0.49
SPAST-202ENST00000345662 MUC4Q99102 2169 aa11.97□□□□□ -0.49
SPAST-202ENST00000345662 SPAG11AQ6PDA7 123 aa11.97□□□□□ -0.49
SPAST-202ENST00000345662 LINC00167Q96N53 147 aa11.96□□□□□ -0.49
SPAST-202ENST00000345662 RETNLBQ9BQ08 111 aa11.96□□□□□ -0.49
SPAST-202ENST00000345662 ZNF462Q96JM2 2506 aa11.96□□□□□ -0.5
SPAST-202ENST00000345662 ANKRD11Q6UB99 2663 aaPredicted RBP11.95□□□□□ -0.5
SPAST-202ENST00000345662 JMJD1CQ15652 2540 aa11.95□□□□□ -0.5
SPAST-202ENST00000345662 SPINK1P00995 79 aa11.95□□□□□ -0.5
SPAST-202ENST00000345662 LINC00336Q6ZUF6 198 aa11.95□□□□□ -0.5
SPAST-202ENST00000345662 A0A1B0GU69 56 aa11.94□□□□□ -0.5
SPAST-202ENST00000345662 LINC01556Q5JQF7 62 aa11.93□□□□□ -0.5
SPAST-202ENST00000345662 Q6ZRX8 168 aa11.92□□□□□ -0.5
SPAST-202ENST00000345662 TRAV22A0A0B4J277 110 aa11.91□□□□□ -0.5
SPAST-202ENST00000345662 LINC00476Q8WZB0 136 aa11.91□□□□□ -0.5
SPAST-202ENST00000345662 IGLV6-57P01721 117 aa11.9□□□□□ -0.5
SPAST-202ENST00000345662 ACYP2P14621 99 aa11.9□□□□□ -0.5
SPAST-202ENST00000345662 H7BZZ5 65 aa11.89□□□□□ -0.51
SPAST-202ENST00000345662 A8MUN3 132 aa11.89□□□□□ -0.51
SPAST-202ENST00000345662 FSHBP01225 129 aa11.89□□□□□ -0.51
SPAST-202ENST00000345662 SERTAD4-AS1Q5TG53 156 aa11.88□□□□□ -0.51
SPAST-202ENST00000345662 ZFYVE26Q68DK2 2539 aa11.88□□□□□ -0.51
SPAST-202ENST00000345662 COL27A1Q8IZC6 1860 aaPredicted RBP11.88□□□□□ -0.51
SPAST-202ENST00000345662 GVQW2A0A096LPI5 108 aaPredicted RBP11.86□□□□□ -0.51
SPAST-202ENST00000345662 SMR3AQ99954 134 aa11.86□□□□□ -0.51
SPAST-202ENST00000345662 TRBV7-4A0A0J9YYF1 115 aa11.85□□□□□ -0.51
SPAST-202ENST00000345662 CYP4F30PQ9H0H9 118 aa11.85□□□□□ -0.51
SPAST-202ENST00000345662 X6R8D5 127 aa11.84□□□□□ -0.51
SPAST-202ENST00000345662 ST20-AS1Q8NBB2 130 aa11.83□□□□□ -0.52
SPAST-202ENST00000345662 C8orf87E5RJ46 101 aa11.81□□□□□ -0.52
SPAST-202ENST00000345662 VPREB1P12018 145 aa11.81□□□□□ -0.52
SPAST-202ENST00000345662 COL4A2P08572 1712 aa11.81□□□□□ -0.52
SPAST-202ENST00000345662 K7EQZ3 153 aa11.81□□□□□ -0.52
SPAST-202ENST00000345662 IGKV2D-30A0A075B6S6 120 aa11.8□□□□□ -0.52
SPAST-202ENST00000345662 IGKV2-30P06310 120 aa11.8□□□□□ -0.52
SPAST-202ENST00000345662 RPL37AP61513 92 aaKnown RBP11.79□□□□□ -0.52
SPAST-202ENST00000345662 ATP11AUNQ6ZP68 121 aa11.78□□□□□ -0.52
SPAST-202ENST00000345662 H3BNG1 76 aa11.78□□□□□ -0.52
SPAST-202ENST00000345662 NUPR2A6NF83 97 aa11.78□□□□□ -0.52
SPAST-202ENST00000345662 LRRK2Q5S007 2527 aa11.78□□□□□ -0.52
SPAST-202ENST00000345662 LINC01600Q96MT4 127 aa11.77□□□□□ -0.52
SPAST-202ENST00000345662 IGLV5-52A0A0A0MRZ9 124 aa11.77□□□□□ -0.53
SPAST-202ENST00000345662 C7orf65Q6ZTY9 151 aa11.77□□□□□ -0.53
SPAST-202ENST00000345662 COA5Q86WW8 74 aa11.76□□□□□ -0.53
SPAST-202ENST00000345662 CD164Q04900 197 aa11.75□□□□□ -0.53
SPAST-202ENST00000345662 LY6G6CO95867 125 aa11.75□□□□□ -0.53
SPAST-202ENST00000345662 C9orf129Q5T035 196 aaKnown RBP11.75□□□□□ -0.53
SPAST-202ENST00000345662 LINC00528Q8N1L1 170 aa11.75□□□□□ -0.53
SPAST-202ENST00000345662 Q6ZRP5 223 aa11.74□□□□□ -0.53
SPAST-202ENST00000345662 MTORP42345 2549 aa11.74□□□□□ -0.53
SPAST-202ENST00000345662 MOBPQ13875 183 aa11.73□□□□□ -0.53
SPAST-202ENST00000345662 GOLGB1Q14789 3259 aaKnown RBP11.73□□□□□ -0.53
SPAST-202ENST00000345662 A8MWP4 228 aa11.72□□□□□ -0.53
SPAST-202ENST00000345662 PCSK5Q92824 1860 aa11.72□□□□□ -0.53
SPAST-202ENST00000345662 WIPF1O43516 503 aa11.71□□□□□ -0.53
SPAST-202ENST00000345662 LOC101927531A0A1B0GV80 90 aa11.7□□□□□ -0.54
SPAST-202ENST00000345662 EPM2AB3EWF7 344 aa11.69□□□□□ -0.54
SPAST-202ENST00000345662 KCNQ1DNQ9H478 68 aa11.69□□□□□ -0.54
SPAST-202ENST00000345662 SPTBN4Q9H254 2564 aa11.67□□□□□ -0.54
SPAST-202ENST00000345662 CHD8Q9HCK8 2581 aa11.67□□□□□ -0.54
SPAST-202ENST00000345662 PHF5AQ7RTV0 110 aaKnown RBP11.66□□□□□ -0.54
SPAST-202ENST00000345662 Q8NAQ8 132 aa11.66□□□□□ -0.54
SPAST-202ENST00000345662 OBSCN-AS1Q96MR7 158 aa11.64□□□□□ -0.55
SPAST-202ENST00000345662 C16orf90A8MZG2 172 aa11.64□□□□□ -0.55
SPAST-202ENST00000345662 KTN1-AS1Q86SY8 53 aa11.64□□□□□ -0.55
SPAST-202ENST00000345662 IGLV1-50A0A075B6I6 118 aa11.63□□□□□ -0.55
SPAST-202ENST00000345662 Q8N377 158 aa11.61□□□□□ -0.55
SPAST-202ENST00000345662 POLQO75417 2590 aa11.61□□□□□ -0.55
SPAST-202ENST00000345662 CSNK1G2-AS1Q8NCQ2 148 aa11.61□□□□□ -0.55
SPAST-202ENST00000345662 PRR15Q8IV56 129 aa11.6□□□□□ -0.55
SPAST-202ENST00000345662 IGLV8-61A0A075B6I0 122 aa11.6□□□□□ -0.55
SPAST-202ENST00000345662 FAM168BA1KXE4 195 aa11.6□□□□□ -0.55
SPAST-202ENST00000345662 ZNF575Q86XF7 245 aa11.6□□□□□ -0.55
SPAST-202ENST00000345662 MRPL34Q9BQ48 92 aaKnown RBP11.6□□□□□ -0.55
SPAST-202ENST00000345662 IGFL1Q6UW32 110 aa11.59□□□□□ -0.55
SPAST-202ENST00000345662 LINC00313P59037 77 aa11.58□□□□□ -0.56
SPAST-202ENST00000345662 UQCR11O14957 56 aa11.58□□□□□ -0.56
SPAST-202ENST00000345662 C1orf134Q5TEV5 83 aa11.58□□□□□ -0.56
SPAST-202ENST00000345662 PRR34Q9NV39 138 aa11.57□□□□□ -0.56
SPAST-202ENST00000345662 PRRC2CQ9Y520 2896 aaKnown RBP11.57□□□□□ -0.56
SPAST-202ENST00000345662 SPACA4Q8TDM5 124 aa11.56□□□□□ -0.56
SPAST-202ENST00000345662 ANKRD17O75179 2603 aaKnown RBP11.54□□□□□ -0.56
SPAST-202ENST00000345662 FAM229AH3BQW9 127 aa11.53□□□□□ -0.56
SPAST-202ENST00000345662 LINC00588Q9Y4M8 146 aa11.53□□□□□ -0.56
SPAST-202ENST00000345662 DNAH10OSP0CZ25 163 aa11.52□□□□□ -0.56
SPAST-202ENST00000345662 LCA10Q71F78 164 aa11.52□□□□□ -0.56
SPAST-202ENST00000345662 SPANXA2-OT1Q8N9U9 137 aa11.51□□□□□ -0.57
SPAST-202ENST00000345662 C8orf17Q9NRJ1 99 aa11.5□□□□□ -0.57
SPAST-202ENST00000345662 C15orf56Q8N910 161 aa11.49□□□□□ -0.57
SPAST-202ENST00000345662 GIG44P09565 113 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms