RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 CIRBP-AS1Q8TBR5 109 aa8.32□□□□□ -1.08
COL12A1-202ENST00000345356 C22orf24Q9Y442 160 aa8.32□□□□□ -1.08
COL12A1-202ENST00000345356 CYP4F30PQ9H0H9 118 aa8.31□□□□□ -1.08
COL12A1-202ENST00000345356 TP53AIP1Q9HCN2 124 aa8.31□□□□□ -1.08
COL12A1-202ENST00000345356 EP400Q96L91 3159 aa8.31□□□□□ -1.08
COL12A1-202ENST00000345356 ATP11AUNQ6ZP68 121 aa8.3□□□□□ -1.08
COL12A1-202ENST00000345356 TRAV22A0A0B4J277 110 aa8.3□□□□□ -1.08
COL12A1-202ENST00000345356 ACYP2P14621 99 aa8.29□□□□□ -1.08
COL12A1-202ENST00000345356 LY6G6DO95868 133 aa8.29□□□□□ -1.08
COL12A1-202ENST00000345356 TLN1Q9Y490 2541 aaKnown RBP8.29□□□□□ -1.08
COL12A1-202ENST00000345356 TRBV7-4A0A0J9YYF1 115 aa8.28□□□□□ -1.08
COL12A1-202ENST00000345356 KTN1-AS1Q86SY8 53 aa8.28□□□□□ -1.08
COL12A1-202ENST00000345356 C9orf129Q5T035 196 aaKnown RBP8.27□□□□□ -1.09
COL12A1-202ENST00000345356 LINC00476Q8WZB0 136 aa8.27□□□□□ -1.09
COL12A1-202ENST00000345356 INAFM1C9JVW0 142 aa8.27□□□□□ -1.09
COL12A1-202ENST00000345356 COA5Q86WW8 74 aa8.27□□□□□ -1.09
COL12A1-202ENST00000345356 LINC00167Q96N53 147 aa8.27□□□□□ -1.09
COL12A1-202ENST00000345356 CENPFP49454 3210 aa8.26□□□□□ -1.09
COL12A1-202ENST00000345356 K7EQZ3 153 aa8.26□□□□□ -1.09
COL12A1-202ENST00000345356 RPL37AP61513 92 aaKnown RBP8.26□□□□□ -1.09
COL12A1-202ENST00000345356 DOPEY1Q5JWR5 2465 aa8.26□□□□□ -1.09
COL12A1-202ENST00000345356 M0R2N4 97 aa8.26□□□□□ -1.09
COL12A1-202ENST00000345356 X6R8D5 127 aa8.25□□□□□ -1.09
COL12A1-202ENST00000345356 IGLV6-57P01721 117 aa8.25□□□□□ -1.09
COL12A1-202ENST00000345356 Q6ZRX8 168 aa8.24□□□□□ -1.09
COL12A1-202ENST00000345356 ST20-AS1Q8NBB2 130 aa8.24□□□□□ -1.09
COL12A1-202ENST00000345356 LOC101927531A0A1B0GV80 90 aa8.23□□□□□ -1.09
COL12A1-202ENST00000345356 C7orf65Q6ZTY9 151 aa8.23□□□□□ -1.09
COL12A1-202ENST00000345356 IGF2RP11717 2491 aa8.23□□□□□ -1.09
COL12A1-202ENST00000345356 IGKV2D-30A0A075B6S6 120 aa8.22□□□□□ -1.09
COL12A1-202ENST00000345356 IGKV2-30P06310 120 aa8.22□□□□□ -1.09
COL12A1-202ENST00000345356 LINC01556Q5JQF7 62 aa8.22□□□□□ -1.09
COL12A1-202ENST00000345356 MDFIQ99750 246 aa8.22□□□□□ -1.09
COL12A1-202ENST00000345356 SETD2Q9BYW2 2564 aaPredicted RBP8.22□□□□□ -1.09
COL12A1-202ENST00000345356 OXLD1Q5BKU9 147 aa8.21□□□□□ -1.09
COL12A1-202ENST00000345356 PRR15Q8IV56 129 aa8.21□□□□□ -1.1
COL12A1-202ENST00000345356 MUC4Q99102 2169 aa8.2□□□□□ -1.1
COL12A1-202ENST00000345356 LINC01600Q96MT4 127 aa8.2□□□□□ -1.1
COL12A1-202ENST00000345356 IGLV8-61A0A075B6I0 122 aa8.19□□□□□ -1.1
COL12A1-202ENST00000345356 USP9XQ93008 2570 aaPredicted RBP8.19□□□□□ -1.1
COL12A1-202ENST00000345356 LCA10Q71F78 164 aa8.19□□□□□ -1.1
COL12A1-202ENST00000345356 Q5XG85 94 aa8.18□□□□□ -1.1
COL12A1-202ENST00000345356 KLK9Q2XQG4 91 aa8.18□□□□□ -1.1
COL12A1-202ENST00000345356 TLN2Q9Y4G6 2542 aa8.18□□□□□ -1.1
COL12A1-202ENST00000345356 PKD1L2Q7Z442 2459 aa8.16□□□□□ -1.1
COL12A1-202ENST00000345356 GVQW2A0A096LPI5 108 aaPredicted RBP8.15□□□□□ -1.1
COL12A1-202ENST00000345356 GOLGB1Q14789 3259 aaKnown RBP8.15□□□□□ -1.11
COL12A1-202ENST00000345356 C16orf95Q9H693 158 aa8.14□□□□□ -1.11
COL12A1-202ENST00000345356 A8MWP4 228 aa8.14□□□□□ -1.11
COL12A1-202ENST00000345356 LINC00528Q8N1L1 170 aa8.14□□□□□ -1.11
COL12A1-202ENST00000345356 ABCA12Q86UK0 2595 aa8.13□□□□□ -1.11
COL12A1-202ENST00000345356 KRTAP10-9P60411 292 aa8.13□□□□□ -1.11
COL12A1-202ENST00000345356 SPINT4Q6UDR6 99 aa8.13□□□□□ -1.11
COL12A1-202ENST00000345356 OBSCN-AS1Q96MR7 158 aa8.13□□□□□ -1.11
COL12A1-202ENST00000345356 MOBPQ13875 183 aa8.12□□□□□ -1.11
COL12A1-202ENST00000345356 Q6ZRP5 223 aa8.12□□□□□ -1.11
COL12A1-202ENST00000345356 COL27A1Q8IZC6 1860 aaPredicted RBP8.12□□□□□ -1.11
COL12A1-202ENST00000345356 CYSTM1Q9H1C7 97 aa8.12□□□□□ -1.11
COL12A1-202ENST00000345356 LY6G6CO95867 125 aa8.11□□□□□ -1.11
COL12A1-202ENST00000345356 UQCR11O14957 56 aa8.11□□□□□ -1.11
COL12A1-202ENST00000345356 USP9YO00507 2555 aaPredicted RBP8.1□□□□□ -1.11
COL12A1-202ENST00000345356 NCOR2Q9Y618 2525 aa8.1□□□□□ -1.11
COL12A1-202ENST00000345356 PRO3102Q9H379 93 aa8.09□□□□□ -1.11
COL12A1-202ENST00000345356 Q1T7F1 81 aa8.09□□□□□ -1.11
COL12A1-202ENST00000345356 NUPR2A6NF83 97 aa8.08□□□□□ -1.12
COL12A1-202ENST00000345356 EPM2AB3EWF7 344 aa8.08□□□□□ -1.12
COL12A1-202ENST00000345356 SMR3AQ99954 134 aa8.07□□□□□ -1.12
COL12A1-202ENST00000345356 MIR22HGQ0VDD5 57 aa8.07□□□□□ -1.12
COL12A1-202ENST00000345356 CDC42SE1Q9NRR8 79 aa8.07□□□□□ -1.12
COL12A1-202ENST00000345356 Q8N377 158 aa8.07□□□□□ -1.12
COL12A1-202ENST00000345356 KCNQ1DNQ9H478 68 aa8.06□□□□□ -1.12
COL12A1-202ENST00000345356 RBM12B-AS1Q9P1G2 102 aa8.06□□□□□ -1.12
COL12A1-202ENST00000345356 FP248Q71RG6 208 aaPredicted RBP8.06□□□□□ -1.12
COL12A1-202ENST00000345356 PHF5AQ7RTV0 110 aaKnown RBP8.06□□□□□ -1.12
COL12A1-202ENST00000345356 SSBP3-AS1Q7Z2R9 100 aa8.06□□□□□ -1.12
COL12A1-202ENST00000345356 ZNF575Q86XF7 245 aa8.06□□□□□ -1.12
COL12A1-202ENST00000345356 FAM168BA1KXE4 195 aa8.05□□□□□ -1.12
COL12A1-202ENST00000345356 IGFL1Q6UW32 110 aa8.05□□□□□ -1.12
COL12A1-202ENST00000345356 IGLV5-52A0A0A0MRZ9 124 aa8.05□□□□□ -1.12
COL12A1-202ENST00000345356 MRPL34Q9BQ48 92 aaKnown RBP8.04□□□□□ -1.12
COL12A1-202ENST00000345356 OCR1Q9BZK8 76 aa8.04□□□□□ -1.12
COL12A1-202ENST00000345356 COL4A2P08572 1712 aa8.04□□□□□ -1.12
COL12A1-202ENST00000345356 SPANXA2-OT1Q8N9U9 137 aa8.03□□□□□ -1.12
COL12A1-202ENST00000345356 IGLV1-50A0A075B6I6 118 aa8.02□□□□□ -1.13
COL12A1-202ENST00000345356 FAM229BQ4G0N7 80 aa8.02□□□□□ -1.13
COL12A1-202ENST00000345356 JMJD1CQ15652 2540 aa8.02□□□□□ -1.13
COL12A1-202ENST00000345356 A0A0G2JQZ4 141 aa8.01□□□□□ -1.13
COL12A1-202ENST00000345356 A0A1W2PNN7 141 aa8.01□□□□□ -1.13
COL12A1-202ENST00000345356 LINC00313P59037 77 aa8.01□□□□□ -1.13
COL12A1-202ENST00000345356 H3BNG1 76 aa8.01□□□□□ -1.13
COL12A1-202ENST00000345356 SPACA4Q8TDM5 124 aa8□□□□□ -1.13
COL12A1-202ENST00000345356 OXTP01178 125 aa7.99□□□□□ -1.13
COL12A1-202ENST00000345356 A0A1W2PNM2 257 aa7.99□□□□□ -1.13
COL12A1-202ENST00000345356 C16orf90A8MZG2 172 aa7.99□□□□□ -1.13
COL12A1-202ENST00000345356 C8orf17Q9NRJ1 99 aa7.98□□□□□ -1.13
COL12A1-202ENST00000345356 CEP295Q9C0D2 2601 aa7.98□□□□□ -1.13
COL12A1-202ENST00000345356 FAM229AH3BQW9 127 aa7.97□□□□□ -1.13
COL12A1-202ENST00000345356 J3QL48 77 aa7.96□□□□□ -1.13
COL12A1-202ENST00000345356 Q8NAQ8 132 aa7.96□□□□□ -1.13
COL12A1-202ENST00000345356 PCSK5Q92824 1860 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms