RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 S100A7L2Q5SY68 101 aa8.77□□□□□ -1
CLK3-201ENST00000345005 LYPD5Q6UWN5 251 aa8.77□□□□□ -1
CLK3-201ENST00000345005 LINC01561Q8N1V8 128 aa8.77□□□□□ -1
CLK3-201ENST00000345005 DPH3Q96FX2 82 aa8.77□□□□□ -1
CLK3-201ENST00000345005 LOC107984640A0A0U1RRK4 108 aa8.77□□□□□ -1.01
CLK3-201ENST00000345005 RPL18AQ02543 176 aaKnown RBP8.77□□□□□ -1.01
CLK3-201ENST00000345005 Q6JHZ5 121 aa8.77□□□□□ -1.01
CLK3-201ENST00000345005 SERP2Q8N6R1 65 aa8.77□□□□□ -1.01
CLK3-201ENST00000345005 FAM218AQ96MZ4 157 aa8.77□□□□□ -1.01
CLK3-201ENST00000345005 C22orf24Q9Y442 160 aa8.77□□□□□ -1.01
CLK3-201ENST00000345005 A0A087WZ39 114 aa8.76□□□□□ -1.01
CLK3-201ENST00000345005 LINC00337Q8N6G1 96 aa8.76□□□□□ -1.01
CLK3-201ENST00000345005 SMIM11BQ8TCY0 68 aa8.76□□□□□ -1.01
CLK3-201ENST00000345005 IGKV2-28A0A075B6P5 120 aa8.75□□□□□ -1.01
CLK3-201ENST00000345005 IGKV2D-28P01615 120 aa8.75□□□□□ -1.01
CLK3-201ENST00000345005 KLK5Q9Y337 293 aaPredicted RBP8.75□□□□□ -1.01
CLK3-201ENST00000345005 IGHV3OR16-9A0A0B4J2B5 98 aa8.75□□□□□ -1.01
CLK3-201ENST00000345005 TRAV10A0A0B4J240 114 aa8.74□□□□□ -1.01
CLK3-201ENST00000345005 ANGP03950 147 aaKnown RBP8.74□□□□□ -1.01
CLK3-201ENST00000345005 CCL18P55774 89 aa8.74□□□□□ -1.01
CLK3-201ENST00000345005 LINC00269Q8N2A0 174 aa8.74□□□□□ -1.01
CLK3-201ENST00000345005 PRKDCP78527 4128 aaKnown RBP8.74□□□□□ -1.01
CLK3-201ENST00000345005 JMJD7-PLA2G4BH0Y9G9 81 aa8.73□□□□□ -1.01
CLK3-201ENST00000345005 ORMDL1Q9P0S3 153 aa8.73□□□□□ -1.01
CLK3-201ENST00000345005 TOMM7Q9P0U1 55 aa8.73□□□□□ -1.01
CLK3-201ENST00000345005 ATP5EP2Q5VTU8 51 aa8.73□□□□□ -1.01
CLK3-201ENST00000345005 Q9HAA7 133 aa8.73□□□□□ -1.01
CLK3-201ENST00000345005 BCE1O60756 84 aa8.72□□□□□ -1.01
CLK3-201ENST00000345005 NDUFC2O95298 119 aa8.72□□□□□ -1.01
CLK3-201ENST00000345005 REG3AQ06141 175 aa8.72□□□□□ -1.01
CLK3-201ENST00000345005 C6orf226Q5I0X4 101 aa8.71□□□□□ -1.01
CLK3-201ENST00000345005 CLPSL2Q6UWE3 100 aa8.71□□□□□ -1.01
CLK3-201ENST00000345005 UPK3BQ9BT76 320 aa8.71□□□□□ -1.01
CLK3-201ENST00000345005 XCL1P47992 114 aa8.7□□□□□ -1.02
CLK3-201ENST00000345005 Q8N3U1 123 aa8.7□□□□□ -1.02
CLK3-201ENST00000345005 A0A087WYN8 130 aa8.7□□□□□ -1.02
CLK3-201ENST00000345005 ESRGQ1W209 222 aa8.7□□□□□ -1.02
CLK3-201ENST00000345005 CD164L2Q6UWJ8 174 aa8.7□□□□□ -1.02
CLK3-201ENST00000345005 LINC00167Q96N53 147 aa8.7□□□□□ -1.02
CLK3-201ENST00000345005 B9D2Q9BPU9 175 aa8.7□□□□□ -1.02
CLK3-201ENST00000345005 hADV29S1A0JD25 119 aa8.69□□□□□ -1.02
CLK3-201ENST00000345005 TMEM256-PLSCR3K7ERE1 68 aa8.69□□□□□ -1.02
CLK3-201ENST00000345005 LECT2O14960 151 aa8.69□□□□□ -1.02
CLK3-201ENST00000345005 CCKP06307 115 aa8.69□□□□□ -1.02
CLK3-201ENST00000345005 COX17Q14061 63 aa8.69□□□□□ -1.02
CLK3-201ENST00000345005 Q8IZM0 81 aa8.69□□□□□ -1.02
CLK3-201ENST00000345005 CHCHD10Q8WYQ3 142 aaPredicted RBP8.69□□□□□ -1.02
CLK3-201ENST00000345005 H3BQ85 93 aa8.68□□□□□ -1.02
CLK3-201ENST00000345005 MUC7Q8TAX7 377 aa8.68□□□□□ -1.02
CLK3-201ENST00000345005 C14orf132Q9NPU4 83 aa8.68□□□□□ -1.02
CLK3-201ENST00000345005 PRR34Q9NV39 138 aa8.68□□□□□ -1.02
CLK3-201ENST00000345005 KLK12Q9UKR0 248 aa8.68□□□□□ -1.02
CLK3-201ENST00000345005 WFDC10BQ8IUB3 73 aa8.67□□□□□ -1.02
CLK3-201ENST00000345005 TRBV10-3A0A0K0K1G6 114 aa8.66□□□□□ -1.02
CLK3-201ENST00000345005 IGLV10-54A0A075B6I4 117 aa8.66□□□□□ -1.02
CLK3-201ENST00000345005 PFN2P35080 140 aa8.66□□□□□ -1.02
CLK3-201ENST00000345005 LINC00846Q9NV44 126 aa8.66□□□□□ -1.02
CLK3-201ENST00000345005 EPM2AB3EWF7 344 aa8.65□□□□□ -1.02
CLK3-201ENST00000345005 ENHOQ6UWT2 76 aa8.65□□□□□ -1.02
CLK3-201ENST00000345005 TGP01266 2768 aa8.65□□□□□ -1.03
CLK3-201ENST00000345005 Q5XG85 94 aa8.64□□□□□ -1.03
CLK3-201ENST00000345005 HUWE1Q7Z6Z7 4374 aaKnown RBP8.64□□□□□ -1.03
CLK3-201ENST00000345005 LINC01556Q5JQF7 62 aa8.64□□□□□ -1.03
CLK3-201ENST00000345005 PRO0628Q9UI54 55 aa8.64□□□□□ -1.03
CLK3-201ENST00000345005 Q8N814 137 aa8.63□□□□□ -1.03
CLK3-201ENST00000345005 COL7A1Q02388 2944 aa8.62□□□□□ -1.03
CLK3-201ENST00000345005 USP17L23D6RBM5 183 aa8.61□□□□□ -1.03
CLK3-201ENST00000345005 NCR3O14931 201 aa8.61□□□□□ -1.03
CLK3-201ENST00000345005 IGKV3D-7A0A0C4DH55 119 aa8.61□□□□□ -1.03
CLK3-201ENST00000345005 UBL5Q9BZL1 73 aa8.61□□□□□ -1.03
CLK3-201ENST00000345005 SERP1Q9Y6X1 66 aa8.61□□□□□ -1.03
CLK3-201ENST00000345005 GHRHP01286 108 aa8.6□□□□□ -1.03
CLK3-201ENST00000345005 DNAH10OSP0CZ25 163 aa8.6□□□□□ -1.03
CLK3-201ENST00000345005 F8WDY8 70 aa8.59□□□□□ -1.03
CLK3-201ENST00000345005 PDE6GP18545 87 aa8.59□□□□□ -1.03
CLK3-201ENST00000345005 KIAA0087Q14695 138 aa8.59□□□□□ -1.03
CLK3-201ENST00000345005 LINC00588Q9Y4M8 146 aa8.59□□□□□ -1.03
CLK3-201ENST00000345005 STAB2Q8WWQ8 2551 aa8.59□□□□□ -1.03
CLK3-201ENST00000345005 C9orf129Q5T035 196 aaKnown RBP8.58□□□□□ -1.04
CLK3-201ENST00000345005 C4orf26Q17RF5 130 aa8.57□□□□□ -1.04
CLK3-201ENST00000345005 DNAH9Q9NYC9 4486 aa8.57□□□□□ -1.04
CLK3-201ENST00000345005 SLPIP03973 132 aa8.57□□□□□ -1.04
CLK3-201ENST00000345005 C1orf43Q9BWL3 253 aa8.56□□□□□ -1.04
CLK3-201ENST00000345005 LOC110117498A0A087WWA1 95 aa8.55□□□□□ -1.04
CLK3-201ENST00000345005 OXTP01178 125 aa8.55□□□□□ -1.04
CLK3-201ENST00000345005 SPAG11BQ08648 103 aa8.55□□□□□ -1.04
CLK3-201ENST00000345005 KRTAP26-1Q6PEX3 210 aa8.55□□□□□ -1.04
CLK3-201ENST00000345005 HRCT1Q6UXD1 115 aa8.55□□□□□ -1.04
CLK3-201ENST00000345005 DSCR8Q96T75 97 aa8.55□□□□□ -1.04
CLK3-201ENST00000345005 ZNF561-AS1K7EIQ3 104 aa8.54□□□□□ -1.04
CLK3-201ENST00000345005 RBM3P98179 157 aaKnown RBP8.54□□□□□ -1.04
CLK3-201ENST00000345005 ATP5EP56381 51 aaPredicted RBP8.54□□□□□ -1.04
CLK3-201ENST00000345005 LINC00575Q6W349 94 aa8.54□□□□□ -1.04
CLK3-201ENST00000345005 SMIM26A0A096LP01 95 aa8.53□□□□□ -1.04
CLK3-201ENST00000345005 FAM236DA0A1B0GTK5 79 aa8.53□□□□□ -1.04
CLK3-201ENST00000345005 FAM236CP0DP71 79 aa8.53□□□□□ -1.04
CLK3-201ENST00000345005 CYSTM1Q9H1C7 97 aa8.53□□□□□ -1.04
CLK3-201ENST00000345005 IGKV2D-24A0A075B6R9 120 aa8.52□□□□□ -1.04
CLK3-201ENST00000345005 NDUFC1O43677 76 aa8.52□□□□□ -1.05
CLK3-201ENST00000345005 APLNQ9ULZ1 77 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 634 ms