RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 CFC1BP0CG36 223 aa10.55□□□□□ -0.72
CEACAM1-202ENST00000344391 CFC1P0CG37 223 aa10.55□□□□□ -0.72
CEACAM1-202ENST00000344391 TNP2Q05952 138 aa10.55□□□□□ -0.72
CEACAM1-202ENST00000344391 GAGE2EQ4V326 116 aa10.55□□□□□ -0.72
CEACAM1-202ENST00000344391 COL5A1-AS1Q5SY13 56 aa10.55□□□□□ -0.72
CEACAM1-202ENST00000344391 XAGE1AQ9HD64 81 aa10.55□□□□□ -0.72
CEACAM1-202ENST00000344391 GAGE2DQ9UEU5 116 aa10.55□□□□□ -0.72
CEACAM1-202ENST00000344391 LOC107984640A0A0U1RRK4 108 aa10.54□□□□□ -0.72
CEACAM1-202ENST00000344391 K7ERJ3 54 aa10.54□□□□□ -0.72
CEACAM1-202ENST00000344391 RPL18AQ02543 176 aaKnown RBP10.54□□□□□ -0.72
CEACAM1-202ENST00000344391 C9orf163Q8N9P6 203 aa10.54□□□□□ -0.72
CEACAM1-202ENST00000344391 SVIPQ8NHG7 77 aa10.54□□□□□ -0.72
CEACAM1-202ENST00000344391 LBHQ53QV2 105 aaPredicted RBP10.53□□□□□ -0.72
CEACAM1-202ENST00000344391 A0A0B4J2C4 111 aa10.52□□□□□ -0.73
CEACAM1-202ENST00000344391 NDUFC2O95298 119 aa10.51□□□□□ -0.73
CEACAM1-202ENST00000344391 Q8NDZ9 215 aa10.51□□□□□ -0.73
CEACAM1-202ENST00000344391 C9orf129Q5T035 196 aaKnown RBP10.51□□□□□ -0.73
CEACAM1-202ENST00000344391 IGKV2-28A0A075B6P5 120 aa10.5□□□□□ -0.73
CEACAM1-202ENST00000344391 TAX1BP3O14907 124 aa10.5□□□□□ -0.73
CEACAM1-202ENST00000344391 IGKV2D-28P01615 120 aa10.5□□□□□ -0.73
CEACAM1-202ENST00000344391 GAGE2BQ13066 116 aa10.5□□□□□ -0.73
CEACAM1-202ENST00000344391 RAB37Q96AX2 223 aa10.5□□□□□ -0.73
CEACAM1-202ENST00000344391 DNAH5Q8TE73 4624 aa10.49□□□□□ -0.73
CEACAM1-202ENST00000344391 PRO1854Q9UHT4 67 aa10.49□□□□□ -0.73
CEACAM1-202ENST00000344391 PKD1P98161 4303 aa10.49□□□□□ -0.73
CEACAM1-202ENST00000344391 C16orf90A8MZG2 172 aa10.47□□□□□ -0.73
CEACAM1-202ENST00000344391 PRR3P79522 188 aaKnown RBP10.47□□□□□ -0.73
CEACAM1-202ENST00000344391 LINC01620Q4KN68 170 aa10.47□□□□□ -0.73
CEACAM1-202ENST00000344391 SDIM1Q6ZPB5 146 aa10.47□□□□□ -0.73
CEACAM1-202ENST00000344391 A0A096LNI7 61 aa10.47□□□□□ -0.73
CEACAM1-202ENST00000344391 LINC00337Q8N6G1 96 aa10.47□□□□□ -0.73
CEACAM1-202ENST00000344391 PKIGQ9Y2B9 76 aa10.47□□□□□ -0.73
CEACAM1-202ENST00000344391 VPREB1P12018 145 aa10.46□□□□□ -0.74
CEACAM1-202ENST00000344391 FUSP35637 526 aaKnown RBP eCLIP10.46□□□□□ -0.74
CEACAM1-202ENST00000344391 IGLV5-52A0A0A0MRZ9 124 aa10.45□□□□□ -0.74
CEACAM1-202ENST00000344391 TRAV13-2A0A0B4J235 113 aa10.45□□□□□ -0.74
CEACAM1-202ENST00000344391 PLA2G2DQ9UNK4 145 aa10.45□□□□□ -0.74
CEACAM1-202ENST00000344391 PGPEP1Q9NXJ5 209 aa10.44□□□□□ -0.74
CEACAM1-202ENST00000344391 IGKV2-24A0A0C4DH68 120 aa10.44□□□□□ -0.74
CEACAM1-202ENST00000344391 NCR3O14931 201 aa10.44□□□□□ -0.74
CEACAM1-202ENST00000344391 RPL13AP40429 203 aaKnown RBP10.44□□□□□ -0.74
CEACAM1-202ENST00000344391 TRBV10-2A0A0K0K1G8 114 aa10.43□□□□□ -0.74
CEACAM1-202ENST00000344391 C9orf118A6NHY6 69 aa10.43□□□□□ -0.74
CEACAM1-202ENST00000344391 TSPAN13O95857 204 aa10.43□□□□□ -0.74
CEACAM1-202ENST00000344391 KRTAP10-2P60368 255 aa10.43□□□□□ -0.74
CEACAM1-202ENST00000344391 SERTAD4-AS1Q5TG53 156 aa10.43□□□□□ -0.74
CEACAM1-202ENST00000344391 FAM168BA1KXE4 195 aa10.42□□□□□ -0.74
CEACAM1-202ENST00000344391 LINC00336Q6ZUF6 198 aa10.42□□□□□ -0.74
CEACAM1-202ENST00000344391 H7C2G1 150 aa10.41□□□□□ -0.74
CEACAM1-202ENST00000344391 CHTF8P0CG12 524 aa10.41□□□□□ -0.74
CEACAM1-202ENST00000344391 KRTAP7-1Q8IUC3 87 aa10.41□□□□□ -0.74
CEACAM1-202ENST00000344391 NAA38Q9BRA0 125 aaKnown RBP10.41□□□□□ -0.74
CEACAM1-202ENST00000344391 IGLV5-37A0A075B6J1 123 aa10.4□□□□□ -0.74
CEACAM1-202ENST00000344391 OR13C6PQ8NH95 151 aa10.4□□□□□ -0.74
CEACAM1-202ENST00000344391 DNAH8Q96JB1 4490 aa10.4□□□□□ -0.74
CEACAM1-202ENST00000344391 RYR3Q15413 4870 aa10.4□□□□□ -0.74
CEACAM1-202ENST00000344391 H3BUT2 72 aa10.4□□□□□ -0.75
CEACAM1-202ENST00000344391 M0R378 163 aa10.4□□□□□ -0.75
CEACAM1-202ENST00000344391 LINC00474Q9P2X8 69 aa10.4□□□□□ -0.75
CEACAM1-202ENST00000344391 Q1RN00 199 aa10.39□□□□□ -0.75
CEACAM1-202ENST00000344391 TMEM126AQ9H061 195 aa10.39□□□□□ -0.75
CEACAM1-202ENST00000344391 PANO1I0J062 215 aa10.38□□□□□ -0.75
CEACAM1-202ENST00000344391 NKAPP1Q8N9T2 125 aa10.38□□□□□ -0.75
CEACAM1-202ENST00000344391 A0A1W2PNN7 141 aa10.37□□□□□ -0.75
CEACAM1-202ENST00000344391 IGLV6-57P01721 117 aa10.37□□□□□ -0.75
CEACAM1-202ENST00000344391 S100A7L2Q5SY68 101 aa10.37□□□□□ -0.75
CEACAM1-202ENST00000344391 FAM19A5Q7Z5A7 132 aaPredicted RBP10.37□□□□□ -0.75
CEACAM1-202ENST00000344391 C22orf24Q9Y442 160 aa10.36□□□□□ -0.75
CEACAM1-202ENST00000344391 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.36□□□□□ -0.75
CEACAM1-202ENST00000344391 TRBV10-3A0A0K0K1G6 114 aa10.36□□□□□ -0.75
CEACAM1-202ENST00000344391 SPACA4Q8TDM5 124 aa10.36□□□□□ -0.75
CEACAM1-202ENST00000344391 C7orf33Q8WU49 177 aa10.36□□□□□ -0.75
CEACAM1-202ENST00000344391 A0A1W2PPM0 123 aa10.35□□□□□ -0.75
CEACAM1-202ENST00000344391 RPL28P46779 137 aaKnown RBP10.35□□□□□ -0.75
CEACAM1-202ENST00000344391 SMIM11BQ8TCY0 68 aa10.35□□□□□ -0.75
CEACAM1-202ENST00000344391 A0A1B0GV90 55 aa10.34□□□□□ -0.75
CEACAM1-202ENST00000344391 PCP4P48539 62 aa10.34□□□□□ -0.75
CEACAM1-202ENST00000344391 PSMB2P49721 201 aa10.34□□□□□ -0.75
CEACAM1-202ENST00000344391 TRIAP1O43715 76 aa10.33□□□□□ -0.76
CEACAM1-202ENST00000344391 GAGE10A6NGK3 116 aa10.33□□□□□ -0.76
CEACAM1-202ENST00000344391 MRPL55Q7Z7F7 128 aaKnown RBP10.33□□□□□ -0.76
CEACAM1-202ENST00000344391 LINC00167Q96N53 147 aa10.33□□□□□ -0.76
CEACAM1-202ENST00000344391 M0QXV9 152 aa10.32□□□□□ -0.76
CEACAM1-202ENST00000344391 DPH3Q96FX2 82 aa10.32□□□□□ -0.76
CEACAM1-202ENST00000344391 A0A1B0GVY2 172 aa10.31□□□□□ -0.76
CEACAM1-202ENST00000344391 EPM2AB3EWF7 344 aa10.31□□□□□ -0.76
CEACAM1-202ENST00000344391 FABP2P12104 132 aa10.31□□□□□ -0.76
CEACAM1-202ENST00000344391 IGLV1-50A0A075B6I6 118 aa10.29□□□□□ -0.76
CEACAM1-202ENST00000344391 TRAV23DV6A0A075B6W5 121 aa10.29□□□□□ -0.76
CEACAM1-202ENST00000344391 A0A087WYN8 130 aa10.29□□□□□ -0.76
CEACAM1-202ENST00000344391 SCGB1C2P0DMR2 95 aa10.29□□□□□ -0.76
CEACAM1-202ENST00000344391 COX6CP09669 75 aa10.29□□□□□ -0.76
CEACAM1-202ENST00000344391 KRTAP10-1P60331 282 aa10.29□□□□□ -0.76
CEACAM1-202ENST00000344391 PKHD1P08F94 4074 aa10.29□□□□□ -0.76
CEACAM1-202ENST00000344391 DYNC1H1Q14204 4646 aaKnown RBP10.28□□□□□ -0.76
CEACAM1-202ENST00000344391 RPL37AP8A6NKH3 93 aa10.28□□□□□ -0.76
CEACAM1-202ENST00000344391 VAMP3Q15836 100 aa10.28□□□□□ -0.76
CEACAM1-202ENST00000344391 LYRM7Q5U5X0 104 aa10.28□□□□□ -0.76
CEACAM1-202ENST00000344391 KCNQ1DNQ9H478 68 aa10.28□□□□□ -0.76
CEACAM1-202ENST00000344391 C6orf99Q4VX62 202 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms