RNA–Protein interactions for RNA: ENST00000340748.8

DNMT1-201, Transcript of DNA methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-201ENST00000340748 SVIPQ8NHG7 77 aa8.87□□□□□ -0.99
DNMT1-201ENST00000340748 LINC00846Q9NV44 126 aa8.87□□□□□ -0.99
DNMT1-201ENST00000340748 COL27A1Q8IZC6 1860 aaPredicted RBP8.86□□□□□ -0.99
DNMT1-201ENST00000340748 TRBV7-7A0A0K0K1E9 115 aa8.86□□□□□ -0.99
DNMT1-201ENST00000340748 CIRBP-AS1Q8TBR5 109 aa8.86□□□□□ -0.99
DNMT1-201ENST00000340748 C22orf24Q9Y442 160 aa8.86□□□□□ -0.99
DNMT1-201ENST00000340748 X6R8D5 127 aa8.86□□□□□ -0.99
DNMT1-201ENST00000340748 CXCL6P80162 114 aa8.86□□□□□ -0.99
DNMT1-201ENST00000340748 LINC00208Q96KT6 92 aa8.86□□□□□ -0.99
DNMT1-201ENST00000340748 DNAH12Q6ZR08 3092 aa8.85□□□□□ -0.99
DNMT1-201ENST00000340748 A8MTW9 85 aa8.85□□□□□ -0.99
DNMT1-201ENST00000340748 CDIP1Q9H305 208 aa8.85□□□□□ -0.99
DNMT1-201ENST00000340748 A0A087WSZ3 146 aa8.84□□□□□ -0.99
DNMT1-201ENST00000340748 LINC01547P58512 204 aaPredicted RBP8.84□□□□□ -0.99
DNMT1-201ENST00000340748 AGRNO00468 2067 aa8.84□□□□□ -0.99
DNMT1-201ENST00000340748 TRBV7-6A0A0J9YX20 115 aa8.84□□□□□ -0.99
DNMT1-201ENST00000340748 IGHV6-1A0A0B4J1U7 121 aa8.83□□□□□ -1
DNMT1-201ENST00000340748 A6NED7 52 aa8.83□□□□□ -1
DNMT1-201ENST00000340748 C6orf48Q9UBA6 75 aa8.82□□□□□ -1
DNMT1-201ENST00000340748 SMCR5Q8TEV8 140 aa8.81□□□□□ -1
DNMT1-201ENST00000340748 HCG22E2RYF7 251 aa8.81□□□□□ -1
DNMT1-201ENST00000340748 PLA2G1BP04054 148 aaKnown RBP8.81□□□□□ -1
DNMT1-201ENST00000340748 A0A0U1RQV1 116 aa8.8□□□□□ -1
DNMT1-201ENST00000340748 SMCPP49901 116 aaPredicted RBP8.8□□□□□ -1
DNMT1-201ENST00000340748 PRLHP81277 87 aa8.79□□□□□ -1
DNMT1-201ENST00000340748 SOSTDC1Q6X4U4 206 aa8.79□□□□□ -1
DNMT1-201ENST00000340748 PRO0461Q9UI25 63 aa8.79□□□□□ -1
DNMT1-201ENST00000340748 Q8NAQ8 132 aa8.79□□□□□ -1
DNMT1-201ENST00000340748 A0A1B0GW54 56 aa8.79□□□□□ -1
DNMT1-201ENST00000340748 KIAA0087Q14695 138 aa8.78□□□□□ -1
DNMT1-201ENST00000340748 RTL8CO15255 209 aa8.78□□□□□ -1
DNMT1-201ENST00000340748 TMEM254Q8TBM7 123 aa8.78□□□□□ -1
DNMT1-201ENST00000340748 Q9UF83 564 aa8.78□□□□□ -1
DNMT1-201ENST00000340748 H0Y9P7 68 aa8.78□□□□□ -1
DNMT1-201ENST00000340748 ELOF1P60002 83 aaKnown RBP8.77□□□□□ -1
DNMT1-201ENST00000340748 LINC00167Q96N53 147 aa8.77□□□□□ -1.01
DNMT1-201ENST00000340748 LINC00588Q9Y4M8 146 aa8.76□□□□□ -1.01
DNMT1-201ENST00000340748 C19orf73Q9NVV2 129 aa8.76□□□□□ -1.01
DNMT1-201ENST00000340748 BAHCC1Q9P281 2608 aa8.76□□□□□ -1.01
DNMT1-201ENST00000340748 FAM218AQ96MZ4 157 aa8.76□□□□□ -1.01
DNMT1-201ENST00000340748 BCE1O60756 84 aa8.75□□□□□ -1.01
DNMT1-201ENST00000340748 LIMD2Q9BT23 127 aa8.75□□□□□ -1.01
DNMT1-201ENST00000340748 hDV103S1A0JD37 113 aa8.74□□□□□ -1.01
DNMT1-201ENST00000340748 DEFB116Q30KQ4 102 aa8.74□□□□□ -1.01
DNMT1-201ENST00000340748 LOC110117498A0A087WWA1 95 aa8.73□□□□□ -1.01
DNMT1-201ENST00000340748 LINC00336Q6ZUF6 198 aa8.72□□□□□ -1.01
DNMT1-201ENST00000340748 GVQW2A0A096LPI5 108 aaPredicted RBP8.72□□□□□ -1.01
DNMT1-201ENST00000340748 PCNTO95613 3336 aa8.72□□□□□ -1.01
DNMT1-201ENST00000340748 TM2D3Q9BRN9 247 aa8.72□□□□□ -1.01
DNMT1-201ENST00000340748 LITAFQ99732 161 aa8.72□□□□□ -1.01
DNMT1-201ENST00000340748 USP24Q9UPU5 2620 aa8.71□□□□□ -1.01
DNMT1-201ENST00000340748 PCOTHQ58A44 107 aa8.71□□□□□ -1.02
DNMT1-201ENST00000340748 CHD7Q9P2D1 2997 aa8.71□□□□□ -1.02
DNMT1-201ENST00000340748 Q6ZQT0 140 aa8.7□□□□□ -1.02
DNMT1-201ENST00000340748 Q6ZRX8 168 aa8.69□□□□□ -1.02
DNMT1-201ENST00000340748 CFAP46Q8IYW2 2715 aa8.68□□□□□ -1.02
DNMT1-201ENST00000340748 SMIM29Q86T20 159 aa8.68□□□□□ -1.02
DNMT1-201ENST00000340748 MGAM2Q2M2H8 2515 aa8.68□□□□□ -1.02
DNMT1-201ENST00000340748 CRYGAP11844 174 aa8.67□□□□□ -1.02
DNMT1-201ENST00000340748 C1orf195Q5TG92 126 aa8.67□□□□□ -1.02
DNMT1-201ENST00000340748 CSNK1G2-AS1Q8NCQ2 148 aa8.67□□□□□ -1.02
DNMT1-201ENST00000340748 C1orf64Q8NEQ6 169 aa8.67□□□□□ -1.02
DNMT1-201ENST00000340748 TP53AIP1Q9HCN2 124 aa8.67□□□□□ -1.02
DNMT1-201ENST00000340748 RANBP2P49792 3224 aaKnown RBP8.66□□□□□ -1.02
DNMT1-201ENST00000340748 RPL37AP61513 92 aaKnown RBP8.66□□□□□ -1.02
DNMT1-201ENST00000340748 RETNLBQ9BQ08 111 aa8.66□□□□□ -1.02
DNMT1-201ENST00000340748 HTTP42858 3142 aa8.65□□□□□ -1.02
DNMT1-201ENST00000340748 Q8NBF4 154 aa8.65□□□□□ -1.02
DNMT1-201ENST00000340748 CHD9Q3L8U1 2897 aa8.64□□□□□ -1.03
DNMT1-201ENST00000340748 DNAH10OSP0CZ25 163 aa8.64□□□□□ -1.03
DNMT1-201ENST00000340748 CASC10Q5T4H9 136 aa8.64□□□□□ -1.03
DNMT1-201ENST00000340748 IGLV6-57P01721 117 aa8.63□□□□□ -1.03
DNMT1-201ENST00000340748 LINC00476Q8WZB0 136 aa8.63□□□□□ -1.03
DNMT1-201ENST00000340748 MOBPQ13875 183 aa8.62□□□□□ -1.03
DNMT1-201ENST00000340748 PHF5AQ7RTV0 110 aaKnown RBP8.62□□□□□ -1.03
DNMT1-201ENST00000340748 ITPR3Q14573 2671 aa8.62□□□□□ -1.03
DNMT1-201ENST00000340748 VPREB1P12018 145 aa8.61□□□□□ -1.03
DNMT1-201ENST00000340748 FLNAP21333 2647 aaKnown RBP8.6□□□□□ -1.03
DNMT1-201ENST00000340748 H3BPC8 53 aa8.6□□□□□ -1.03
DNMT1-201ENST00000340748 Q6ZRP5 223 aa8.6□□□□□ -1.03
DNMT1-201ENST00000340748 EPM2AB3EWF7 344 aa8.6□□□□□ -1.03
DNMT1-201ENST00000340748 SMR3BP02814 79 aaPredicted RBP8.6□□□□□ -1.03
DNMT1-201ENST00000340748 PSPHP1O15172 72 aa8.59□□□□□ -1.03
DNMT1-201ENST00000340748 PMAIP1Q13794 54 aa8.58□□□□□ -1.04
DNMT1-201ENST00000340748 ST20-AS1Q8NBB2 130 aa8.57□□□□□ -1.04
DNMT1-201ENST00000340748 ZNF292O60281 2723 aa8.57□□□□□ -1.04
DNMT1-201ENST00000340748 TRBV7-4A0A0J9YYF1 115 aa8.56□□□□□ -1.04
DNMT1-201ENST00000340748 APLNQ9ULZ1 77 aa8.56□□□□□ -1.04
DNMT1-201ENST00000340748 LINC00612Q8N6U2 182 aa8.56□□□□□ -1.04
DNMT1-201ENST00000340748 RPS28P62857 69 aaKnown RBP8.55□□□□□ -1.04
DNMT1-201ENST00000340748 PRR34Q9NV39 138 aa8.55□□□□□ -1.04
DNMT1-201ENST00000340748 C5orf42Q9H799 3197 aa8.55□□□□□ -1.04
DNMT1-201ENST00000340748 SPINK1P00995 79 aa8.55□□□□□ -1.04
DNMT1-201ENST00000340748 GIG44P09565 113 aaPredicted RBP8.54□□□□□ -1.04
DNMT1-201ENST00000340748 KCNQ1DNQ9H478 68 aa8.54□□□□□ -1.04
DNMT1-201ENST00000340748 SETXQ7Z333 2677 aaKnown RBP8.53□□□□□ -1.04
DNMT1-201ENST00000340748 IGLV1-50A0A075B6I6 118 aa8.53□□□□□ -1.04
DNMT1-201ENST00000340748 IGKV2D-30A0A075B6S6 120 aa8.53□□□□□ -1.04
DNMT1-201ENST00000340748 IGKV2-30P06310 120 aa8.53□□□□□ -1.04
DNMT1-201ENST00000340748 SPACA4Q8TDM5 124 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms