RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 IGHV4-28A0A0C4DH34 117 aa10.5□□□□□ -0.73
BRAT1-201ENST00000340611 F8WEM9 126 aa10.5□□□□□ -0.73
BRAT1-201ENST00000340611 LINC00242Q5T6M2 205 aa10.49□□□□□ -0.73
BRAT1-201ENST00000340611 CELA1Q9UNI1 258 aa10.49□□□□□ -0.73
BRAT1-201ENST00000340611 LOC100131303A0A0U1RQF7 123 aa10.49□□□□□ -0.73
BRAT1-201ENST00000340611 S100A7L2Q5SY68 101 aa10.49□□□□□ -0.73
BRAT1-201ENST00000340611 LECT2O14960 151 aa10.48□□□□□ -0.73
BRAT1-201ENST00000340611 IGLV5-45A0A087WSX0 123 aa10.47□□□□□ -0.73
BRAT1-201ENST00000340611 TRBV7-6A0A0J9YX20 115 aa10.47□□□□□ -0.73
BRAT1-201ENST00000340611 IGLV5-39A0A0G2JS06 123 aa10.47□□□□□ -0.73
BRAT1-201ENST00000340611 SMIM1B2RUZ4 78 aa10.47□□□□□ -0.73
BRAT1-201ENST00000340611 EPM2AB3EWF7 344 aa10.46□□□□□ -0.73
BRAT1-201ENST00000340611 K7EIL1 84 aa10.45□□□□□ -0.74
BRAT1-201ENST00000340611 Q8NAQ8 132 aa10.45□□□□□ -0.74
BRAT1-201ENST00000340611 OVOL2Q9BRP0 275 aa10.45□□□□□ -0.74
BRAT1-201ENST00000340611 MIR7-3HGQ8N6C7 128 aa10.45□□□□□ -0.74
BRAT1-201ENST00000340611 CCKP06307 115 aa10.44□□□□□ -0.74
BRAT1-201ENST00000340611 TRGV4A0A0C4DH28 118 aa10.44□□□□□ -0.74
BRAT1-201ENST00000340611 CRPP02741 224 aa10.43□□□□□ -0.74
BRAT1-201ENST00000340611 HTN3P15516 51 aa10.43□□□□□ -0.74
BRAT1-201ENST00000340611 LINC00337Q8N6G1 96 aa10.43□□□□□ -0.74
BRAT1-201ENST00000340611 STAB2Q8WWQ8 2551 aa10.42□□□□□ -0.74
BRAT1-201ENST00000340611 RPL36AP83881 106 aaKnown RBP10.42□□□□□ -0.74
BRAT1-201ENST00000340611 RPL36ALQ969Q0 106 aaKnown RBP10.42□□□□□ -0.74
BRAT1-201ENST00000340611 A0A096LPF7 62 aa10.42□□□□□ -0.74
BRAT1-201ENST00000340611 FAM229BQ4G0N7 80 aa10.42□□□□□ -0.74
BRAT1-201ENST00000340611 SMIM11BQ8TCY0 68 aa10.42□□□□□ -0.74
BRAT1-201ENST00000340611 TRAV10A0A0B4J240 114 aa10.4□□□□□ -0.74
BRAT1-201ENST00000340611 K7EQD1 137 aa10.4□□□□□ -0.74
BRAT1-201ENST00000340611 NTM-AS1Q6ZSK4 140 aa10.4□□□□□ -0.74
BRAT1-201ENST00000340611 MEGF8Q7Z7M0 2845 aa10.4□□□□□ -0.75
BRAT1-201ENST00000340611 IGKV3OR2-268A0A0C4DH90 116 aa10.39□□□□□ -0.75
BRAT1-201ENST00000340611 TOMM7Q9P0U1 55 aa10.39□□□□□ -0.75
BRAT1-201ENST00000340611 MIFP14174 115 aa10.38□□□□□ -0.75
BRAT1-201ENST00000340611 DAD1P61803 113 aa10.38□□□□□ -0.75
BRAT1-201ENST00000340611 COPS9Q8WXC6 57 aa10.38□□□□□ -0.75
BRAT1-201ENST00000340611 HUWE1Q7Z6Z7 4374 aaKnown RBP10.37□□□□□ -0.75
BRAT1-201ENST00000340611 A0A0J9YWU9 116 aa10.37□□□□□ -0.75
BRAT1-201ENST00000340611 TRAV7A0A075B6U4 112 aa10.36□□□□□ -0.75
BRAT1-201ENST00000340611 TRAV13-2A0A0B4J235 113 aa10.36□□□□□ -0.75
BRAT1-201ENST00000340611 LINC00612Q8N6U2 182 aa10.36□□□□□ -0.75
BRAT1-201ENST00000340611 SND1-IT1Q9HBX3 110 aa10.36□□□□□ -0.75
BRAT1-201ENST00000340611 CDC42SE2Q9NRR3 84 aa10.36□□□□□ -0.75
BRAT1-201ENST00000340611 IGKV2-28A0A075B6P5 120 aa10.35□□□□□ -0.75
BRAT1-201ENST00000340611 A0A087WZ39 114 aa10.35□□□□□ -0.75
BRAT1-201ENST00000340611 IGKV2D-28P01615 120 aa10.35□□□□□ -0.75
BRAT1-201ENST00000340611 HAMPP81172 84 aa10.35□□□□□ -0.75
BRAT1-201ENST00000340611 OBSCN-AS1Q96MR7 158 aa10.35□□□□□ -0.75
BRAT1-201ENST00000340611 GYPEP15421 78 aa10.34□□□□□ -0.75
BRAT1-201ENST00000340611 PMAIP1Q13794 54 aa10.34□□□□□ -0.75
BRAT1-201ENST00000340611 ORMDL1Q9P0S3 153 aa10.34□□□□□ -0.75
BRAT1-201ENST00000340611 LYRM9A8MSI8 78 aa10.34□□□□□ -0.75
BRAT1-201ENST00000340611 SPART-AS1P0CW21 52 aa10.34□□□□□ -0.75
BRAT1-201ENST00000340611 UBL5Q9BZL1 73 aa10.34□□□□□ -0.75
BRAT1-201ENST00000340611 LINC00158P58513 81 aa10.34□□□□□ -0.75
BRAT1-201ENST00000340611 LRCOL1A6NCL2 159 aa10.33□□□□□ -0.76
BRAT1-201ENST00000340611 NANOS2P60321 138 aaKnown RBP10.33□□□□□ -0.76
BRAT1-201ENST00000340611 KLKP1Q107X0 134 aa10.32□□□□□ -0.76
BRAT1-201ENST00000340611 Q6ZTC4 211 aa10.32□□□□□ -0.76
BRAT1-201ENST00000340611 PRKDCP78527 4128 aaKnown RBP10.32□□□□□ -0.76
BRAT1-201ENST00000340611 TRBV6-4A0A1B0GX49 114 aa10.32□□□□□ -0.76
BRAT1-201ENST00000340611 UBE2L6O14933 153 aa10.31□□□□□ -0.76
BRAT1-201ENST00000340611 KPRPQ5T749 579 aaPredicted RBP10.31□□□□□ -0.76
BRAT1-201ENST00000340611 FAM19A3Q7Z5A8 133 aa10.31□□□□□ -0.76
BRAT1-201ENST00000340611 COX7B2Q8TF08 81 aa10.31□□□□□ -0.76
BRAT1-201ENST00000340611 PAX4O43316 350 aa10.3□□□□□ -0.76
BRAT1-201ENST00000340611 TM2D3Q9BRN9 247 aa10.3□□□□□ -0.76
BRAT1-201ENST00000340611 TRBV10-1A0A0K0K1A3 114 aa10.3□□□□□ -0.76
BRAT1-201ENST00000340611 PRO0255Q9UI72 69 aa10.3□□□□□ -0.76
BRAT1-201ENST00000340611 DNAH9Q9NYC9 4486 aa10.3□□□□□ -0.76
BRAT1-201ENST00000340611 TENM2Q9NT68 2774 aa10.29□□□□□ -0.76
BRAT1-201ENST00000340611 CCL18P55774 89 aa10.29□□□□□ -0.76
BRAT1-201ENST00000340611 SCXQ7RTU7 201 aa10.29□□□□□ -0.76
BRAT1-201ENST00000340611 C11orf68Q9H3H3 251 aaKnown RBP10.29□□□□□ -0.76
BRAT1-201ENST00000340611 H0YGX0 51 aa10.28□□□□□ -0.76
BRAT1-201ENST00000340611 ATP5EP2Q5VTU8 51 aa10.28□□□□□ -0.76
BRAT1-201ENST00000340611 TGP01266 2768 aa10.27□□□□□ -0.77
BRAT1-201ENST00000340611 Q8N3U1 123 aa10.26□□□□□ -0.77
BRAT1-201ENST00000340611 M0R2N4 97 aa10.26□□□□□ -0.77
BRAT1-201ENST00000340611 IGLV4-60A0A075B6I1 120 aa10.25□□□□□ -0.77
BRAT1-201ENST00000340611 C11orf45Q8TAV5 145 aa10.25□□□□□ -0.77
BRAT1-201ENST00000340611 LYSTQ99698 3801 aa10.23□□□□□ -0.77
BRAT1-201ENST00000340611 LINC01547P58512 204 aaPredicted RBP10.23□□□□□ -0.77
BRAT1-201ENST00000340611 C6orf226Q5I0X4 101 aa10.23□□□□□ -0.77
BRAT1-201ENST00000340611 TRBV6-8A0A0A6YYG3 113 aa10.22□□□□□ -0.77
BRAT1-201ENST00000340611 CSMD3Q7Z407 3707 aa10.21□□□□□ -0.77
BRAT1-201ENST00000340611 JMJD7-PLA2G4BH0Y9G9 81 aa10.21□□□□□ -0.78
BRAT1-201ENST00000340611 PRR3P79522 188 aaKnown RBP10.21□□□□□ -0.78
BRAT1-201ENST00000340611 DEFB131BA0A096LNP1 70 aa10.2□□□□□ -0.78
BRAT1-201ENST00000340611 IGHV3OR16-9A0A0B4J2B5 98 aa10.2□□□□□ -0.78
BRAT1-201ENST00000340611 CLPSL2Q6UWE3 100 aa10.2□□□□□ -0.78
BRAT1-201ENST00000340611 TRBV10-3A0A0K0K1G6 114 aa10.2□□□□□ -0.78
BRAT1-201ENST00000340611 FBN3Q75N90 2809 aa10.19□□□□□ -0.78
BRAT1-201ENST00000340611 IBA57-AS1B1ANH7 110 aa10.18□□□□□ -0.78
BRAT1-201ENST00000340611 PSPHP1O15172 72 aa10.18□□□□□ -0.78
BRAT1-201ENST00000340611 ESRGQ1W209 222 aa10.18□□□□□ -0.78
BRAT1-201ENST00000340611 TMEM254Q8TBM7 123 aa10.18□□□□□ -0.78
BRAT1-201ENST00000340611 Q6ZVQ6 151 aa10.17□□□□□ -0.78
BRAT1-201ENST00000340611 LAMTOR3Q9UHA4 124 aa10.17□□□□□ -0.78
BRAT1-201ENST00000340611 NDUFC1O43677 76 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 341.1 ms