RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 M0R378 163 aa10.19□□□□□ -0.78
RET-201ENST00000340058 BPY2O14599 106 aa10.19□□□□□ -0.78
RET-201ENST00000340058 LY6G6CO95867 125 aa10.19□□□□□ -0.78
RET-201ENST00000340058 EIF4EBP3O60516 100 aaPredicted RBP10.19□□□□□ -0.78
RET-201ENST00000340058 C10orf25Q5T742 122 aa10.19□□□□□ -0.78
RET-201ENST00000340058 Q6ZRU5 148 aa10.19□□□□□ -0.78
RET-201ENST00000340058 C20orf197Q8N268 126 aa10.19□□□□□ -0.78
RET-201ENST00000340058 ESRGQ1W209 222 aa10.18□□□□□ -0.78
RET-201ENST00000340058 RPL28P46779 137 aaKnown RBP10.18□□□□□ -0.78
RET-201ENST00000340058 H0Y9J4 135 aa10.17□□□□□ -0.78
RET-201ENST00000340058 KRTAP10-3P60369 221 aa10.17□□□□□ -0.78
RET-201ENST00000340058 SBSPONQ8IVN8 264 aa10.17□□□□□ -0.78
RET-201ENST00000340058 A0A087WVE0 104 aa10.16□□□□□ -0.78
RET-201ENST00000340058 SMCPP49901 116 aaPredicted RBP10.16□□□□□ -0.78
RET-201ENST00000340058 GIG44P09565 113 aaPredicted RBP10.16□□□□□ -0.78
RET-201ENST00000340058 EGFEM1PQ0D2K5 195 aa10.15□□□□□ -0.78
RET-201ENST00000340058 COX17Q14061 63 aa10.15□□□□□ -0.78
RET-201ENST00000340058 ZNF575Q86XF7 245 aa10.15□□□□□ -0.78
RET-201ENST00000340058 SPATA3Q8NHX4 192 aa10.15□□□□□ -0.78
RET-201ENST00000340058 DMDP11532 3685 aa10.15□□□□□ -0.79
RET-201ENST00000340058 C14orf177Q52M58 125 aa10.14□□□□□ -0.79
RET-201ENST00000340058 CITED1Q99966 193 aa10.14□□□□□ -0.79
RET-201ENST00000340058 HRCT1Q6UXD1 115 aa10.14□□□□□ -0.79
RET-201ENST00000340058 Q8N814 137 aa10.14□□□□□ -0.79
RET-201ENST00000340058 Q8NAQ8 132 aa10.12□□□□□ -0.79
RET-201ENST00000340058 PDE6GP18545 87 aa10.12□□□□□ -0.79
RET-201ENST00000340058 B9D2Q9BPU9 175 aa10.12□□□□□ -0.79
RET-201ENST00000340058 FBN2P35556 2912 aa10.11□□□□□ -0.79
RET-201ENST00000340058 KRTAP1-1Q07627 177 aa10.11□□□□□ -0.79
RET-201ENST00000340058 FAM218AQ96MZ4 157 aa10.1□□□□□ -0.79
RET-201ENST00000340058 NDUFC2-KCTD14E9PQ53 114 aa10.1□□□□□ -0.79
RET-201ENST00000340058 C19orf73Q9NVV2 129 aa10.1□□□□□ -0.79
RET-201ENST00000340058 CSNK1G2-AS1Q8NCQ2 148 aa10.1□□□□□ -0.79
RET-201ENST00000340058 CCDC179H3BU77 68 aa10.09□□□□□ -0.79
RET-201ENST00000340058 M0QXV9 152 aa10.09□□□□□ -0.79
RET-201ENST00000340058 LOC107984640A0A0U1RRK4 108 aa10.09□□□□□ -0.79
RET-201ENST00000340058 NDUFB1O75438 58 aa10.09□□□□□ -0.79
RET-201ENST00000340058 ZFHX4Q86UP3 3567 aa10.09□□□□□ -0.79
RET-201ENST00000340058 IL17DQ8TAD2 202 aa10.09□□□□□ -0.79
RET-201ENST00000340058 IGLV5-45A0A087WSX0 123 aa10.08□□□□□ -0.8
RET-201ENST00000340058 SPINK6Q6UWN8 80 aa10.08□□□□□ -0.8
RET-201ENST00000340058 HIVEP1P15822 2718 aa10.07□□□□□ -0.8
RET-201ENST00000340058 DCHS2Q6V1P9 2916 aa10.07□□□□□ -0.8
RET-201ENST00000340058 IGLV9-49A0A0B4J1Y8 123 aa10.07□□□□□ -0.8
RET-201ENST00000340058 PRO0461Q9UI25 63 aa10.06□□□□□ -0.8
RET-201ENST00000340058 WFDC13Q8IUB5 93 aa10.06□□□□□ -0.8
RET-201ENST00000340058 C6orf48Q9UBA6 75 aa10.06□□□□□ -0.8
RET-201ENST00000340058 H3BQ85 93 aa10.06□□□□□ -0.8
RET-201ENST00000340058 APCP25054 2843 aa10.06□□□□□ -0.8
RET-201ENST00000340058 SNURFQ9Y675 71 aa10.05□□□□□ -0.8
RET-201ENST00000340058 PLAC8L1A1L4L8 177 aa10.05□□□□□ -0.8
RET-201ENST00000340058 LITAFQ99732 161 aa10.05□□□□□ -0.8
RET-201ENST00000340058 CDIP1Q9H305 208 aa10.04□□□□□ -0.8
RET-201ENST00000340058 PRLHP81277 87 aa10.04□□□□□ -0.8
RET-201ENST00000340058 LINC00846Q9NV44 126 aa10.04□□□□□ -0.8
RET-201ENST00000340058 PKIGQ9Y2B9 76 aa10.04□□□□□ -0.8
RET-201ENST00000340058 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.04□□□□□ -0.8
RET-201ENST00000340058 PRR4Q16378 134 aa10.03□□□□□ -0.8
RET-201ENST00000340058 DEFB116Q30KQ4 102 aa10.03□□□□□ -0.8
RET-201ENST00000340058 NIPBLQ6KC79 2804 aaeCLIP10.01□□□□□ -0.81
RET-201ENST00000340058 KRTAP10-11P60412 298 aa10.01□□□□□ -0.81
RET-201ENST00000340058 DHRS4-AS1Q9P1J3 65 aa10.01□□□□□ -0.81
RET-201ENST00000340058 MP68P56378 58 aa10.01□□□□□ -0.81
RET-201ENST00000340058 LINC00575Q6W349 94 aa10.01□□□□□ -0.81
RET-201ENST00000340058 C3orf22Q8N5N4 141 aa10□□□□□ -0.81
RET-201ENST00000340058 HRNRQ86YZ3 2850 aaPredicted RBP10□□□□□ -0.81
RET-201ENST00000340058 UQCRQO14949 82 aa10□□□□□ -0.81
RET-201ENST00000340058 C4orf48Q5BLP8 95 aa10□□□□□ -0.81
RET-201ENST00000340058 NDUFC2O95298 119 aa9.99□□□□□ -0.81
RET-201ENST00000340058 CR1P17927 2039 aa9.99□□□□□ -0.81
RET-201ENST00000340058 C1orf137Q5JT78 98 aa9.98□□□□□ -0.81
RET-201ENST00000340058 Q8N9L7 120 aa9.98□□□□□ -0.81
RET-201ENST00000340058 LINC01556Q5JQF7 62 aa9.98□□□□□ -0.81
RET-201ENST00000340058 STAB2Q8WWQ8 2551 aa9.97□□□□□ -0.81
RET-201ENST00000340058 MRPL55Q7Z7F7 128 aaKnown RBP9.97□□□□□ -0.81
RET-201ENST00000340058 C7orf33Q8WU49 177 aa9.97□□□□□ -0.81
RET-201ENST00000340058 C22orf24Q9Y442 160 aa9.96□□□□□ -0.81
RET-201ENST00000340058 KMT2BQ9UMN6 2715 aaPredicted RBP9.96□□□□□ -0.82
RET-201ENST00000340058 C2orf48Q96LS8 159 aa9.96□□□□□ -0.82
RET-201ENST00000340058 LINC00588Q9Y4M8 146 aa9.96□□□□□ -0.82
RET-201ENST00000340058 FAM240AA0A1B0GVK7 77 aa9.95□□□□□ -0.82
RET-201ENST00000340058 REG3GQ6UW15 175 aa9.95□□□□□ -0.82
RET-201ENST00000340058 IGKV4-1P06312 121 aa9.95□□□□□ -0.82
RET-201ENST00000340058 MUC7Q8TAX7 377 aa9.95□□□□□ -0.82
RET-201ENST00000340058 NUPR2A6NF83 97 aa9.94□□□□□ -0.82
RET-201ENST00000340058 ATP5EP2Q5VTU8 51 aa9.93□□□□□ -0.82
RET-201ENST00000340058 C5orf47Q569G3 176 aa9.93□□□□□ -0.82
RET-201ENST00000340058 SERP2Q8N6R1 65 aa9.93□□□□□ -0.82
RET-201ENST00000340058 MDFIQ99750 246 aa9.92□□□□□ -0.82
RET-201ENST00000340058 LINC00167Q96N53 147 aa9.92□□□□□ -0.82
RET-201ENST00000340058 Q6JHZ5 121 aa9.92□□□□□ -0.82
RET-201ENST00000340058 IMUPQ9GZP8 106 aa9.92□□□□□ -0.82
RET-201ENST00000340058 A0A087WSZ3 146 aa9.92□□□□□ -0.82
RET-201ENST00000340058 CHTF8P0CG12 524 aa9.92□□□□□ -0.82
RET-201ENST00000340058 FAM30AQ9NZY2 134 aa9.92□□□□□ -0.82
RET-201ENST00000340058 LINC01561Q8N1V8 128 aa9.9□□□□□ -0.82
RET-201ENST00000340058 Q6ZVQ6 151 aa9.89□□□□□ -0.83
RET-201ENST00000340058 COX7CP15954 63 aa9.89□□□□□ -0.83
RET-201ENST00000340058 KIAA0087Q14695 138 aa9.89□□□□□ -0.83
RET-201ENST00000340058 J3KT08 172 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms