RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 USP17L23D6RBM5 183 aa10.85□□□□□ -0.67
SHOX-201ENST00000334060 PLEKHB2Q96CS7 222 aa10.85□□□□□ -0.67
SHOX-201ENST00000334060 PKHD1P08F94 4074 aa10.84□□□□□ -0.67
SHOX-201ENST00000334060 IGLV5-45A0A087WSX0 123 aa10.84□□□□□ -0.67
SHOX-201ENST00000334060 ACYP1P07311 99 aa10.84□□□□□ -0.67
SHOX-201ENST00000334060 LGALS3P17931 250 aaKnown RBP10.84□□□□□ -0.67
SHOX-201ENST00000334060 TMEM170BQ5T4T1 132 aa10.84□□□□□ -0.67
SHOX-201ENST00000334060 SMIM1B2RUZ4 78 aa10.83□□□□□ -0.68
SHOX-201ENST00000334060 COX7A2LO14548 114 aa10.83□□□□□ -0.68
SHOX-201ENST00000334060 SLPIP03973 132 aa10.83□□□□□ -0.68
SHOX-201ENST00000334060 LINC01620Q4KN68 170 aa10.83□□□□□ -0.68
SHOX-201ENST00000334060 EPPK1P58107 5090 aaKnown RBP10.82□□□□□ -0.68
SHOX-201ENST00000334060 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.82□□□□□ -0.68
SHOX-201ENST00000334060 A0A087WZ39 114 aa10.82□□□□□ -0.68
SHOX-201ENST00000334060 LEPROTO15243 131 aa10.82□□□□□ -0.68
SHOX-201ENST00000334060 COX6CP09669 75 aa10.82□□□□□ -0.68
SHOX-201ENST00000334060 HERVK_113P63121 156 aa10.82□□□□□ -0.68
SHOX-201ENST00000334060 A0A087WTM6 91 aa10.81□□□□□ -0.68
SHOX-201ENST00000334060 HERV-K104P63124 156 aa10.81□□□□□ -0.68
SHOX-201ENST00000334060 NTN5Q8WTR8 489 aaPredicted RBP10.81□□□□□ -0.68
SHOX-201ENST00000334060 J3QQQ9 107 aa10.81□□□□□ -0.68
SHOX-201ENST00000334060 TSPEAR-AS2P59090 65 aa10.81□□□□□ -0.68
SHOX-201ENST00000334060 TRBV7-7A0A0K0K1E9 115 aa10.8□□□□□ -0.68
SHOX-201ENST00000334060 C2orf82Q6UX34 121 aa10.8□□□□□ -0.68
SHOX-201ENST00000334060 TMEM223A0PJW6 202 aa10.79□□□□□ -0.68
SHOX-201ENST00000334060 MALP21145 153 aa10.79□□□□□ -0.68
SHOX-201ENST00000334060 KRTAP10-2P60368 255 aa10.79□□□□□ -0.68
SHOX-201ENST00000334060 RMI2Q96E14 147 aa10.79□□□□□ -0.68
SHOX-201ENST00000334060 KIAA0087Q14695 138 aa10.79□□□□□ -0.68
SHOX-201ENST00000334060 TOMM7Q9P0U1 55 aa10.79□□□□□ -0.68
SHOX-201ENST00000334060 C10orf25Q5T742 122 aa10.78□□□□□ -0.68
SHOX-201ENST00000334060 SMIM20Q8N5G0 67 aa10.78□□□□□ -0.68
SHOX-201ENST00000334060 A4D1N5 150 aa10.77□□□□□ -0.68
SHOX-201ENST00000334060 CCDC179H3BU77 68 aa10.77□□□□□ -0.68
SHOX-201ENST00000334060 MEIG1Q5JSS6 88 aa10.76□□□□□ -0.69
SHOX-201ENST00000334060 SPAG11BQ08648 103 aa10.76□□□□□ -0.69
SHOX-201ENST00000334060 IGLV5-39A0A0G2JS06 123 aa10.75□□□□□ -0.69
SHOX-201ENST00000334060 SFTA2Q6UW10 78 aa10.75□□□□□ -0.69
SHOX-201ENST00000334060 Q8N814 137 aa10.75□□□□□ -0.69
SHOX-201ENST00000334060 Q1RN00 199 aa10.74□□□□□ -0.69
SHOX-201ENST00000334060 DYNC1H1Q14204 4646 aaKnown RBP10.74□□□□□ -0.69
SHOX-201ENST00000334060 GVQW2A0A096LPI5 108 aaPredicted RBP10.74□□□□□ -0.69
SHOX-201ENST00000334060 C9orf116Q5BN46 136 aaPredicted RBP10.74□□□□□ -0.69
SHOX-201ENST00000334060 UNQ6190/PRO20217Q6UXQ8 127 aa10.74□□□□□ -0.69
SHOX-201ENST00000334060 IGHV1-58A0A0C4DH39 117 aa10.73□□□□□ -0.69
SHOX-201ENST00000334060 Q6ZRU5 148 aa10.72□□□□□ -0.69
SHOX-201ENST00000334060 A0A1B0GVY2 172 aa10.72□□□□□ -0.69
SHOX-201ENST00000334060 ZNF625Q96I27 306 aaPredicted RBP10.72□□□□□ -0.69
SHOX-201ENST00000334060 COX7B2Q8TF08 81 aa10.71□□□□□ -0.69
SHOX-201ENST00000334060 LRP1BQ9NZR2 4599 aa10.71□□□□□ -0.7
SHOX-201ENST00000334060 MUSTN1Q8IVN3 82 aa10.7□□□□□ -0.7
SHOX-201ENST00000334060 ZNF561-AS1K7EIQ3 104 aa10.69□□□□□ -0.7
SHOX-201ENST00000334060 TIMM17BO60830 172 aa10.69□□□□□ -0.7
SHOX-201ENST00000334060 TEX49A0A1B0GTD5 131 aa10.68□□□□□ -0.7
SHOX-201ENST00000334060 CXCL5P42830 114 aa10.68□□□□□ -0.7
SHOX-201ENST00000334060 COPS9Q8WXC6 57 aa10.68□□□□□ -0.7
SHOX-201ENST00000334060 C6orf48Q9UBA6 75 aa10.68□□□□□ -0.7
SHOX-201ENST00000334060 A0A0J9YXY3 114 aa10.68□□□□□ -0.7
SHOX-201ENST00000334060 A0A1B0GX51 115 aa10.68□□□□□ -0.7
SHOX-201ENST00000334060 UQCRQO14949 82 aa10.68□□□□□ -0.7
SHOX-201ENST00000334060 C6orf226Q5I0X4 101 aa10.68□□□□□ -0.7
SHOX-201ENST00000334060 Q8IZM0 81 aa10.68□□□□□ -0.7
SHOX-201ENST00000334060 LST1O00453 97 aa10.67□□□□□ -0.7
SHOX-201ENST00000334060 LINC00643Q86TS7 51 aa10.67□□□□□ -0.7
SHOX-201ENST00000334060 CAMK2N2Q96S95 79 aa10.67□□□□□ -0.7
SHOX-201ENST00000334060 TRIAP1O43715 76 aa10.66□□□□□ -0.7
SHOX-201ENST00000334060 RPS28P62857 69 aaKnown RBP10.66□□□□□ -0.7
SHOX-201ENST00000334060 LINC01561Q8N1V8 128 aa10.66□□□□□ -0.7
SHOX-201ENST00000334060 A0A0U1RRA0 63 aa10.65□□□□□ -0.7
SHOX-201ENST00000334060 PANO1I0J062 215 aa10.65□□□□□ -0.7
SHOX-201ENST00000334060 C3orf22Q8N5N4 141 aa10.65□□□□□ -0.7
SHOX-201ENST00000334060 PRSS2P07478 247 aa10.65□□□□□ -0.71
SHOX-201ENST00000334060 SYCNQ0VAF6 134 aa10.65□□□□□ -0.71
SHOX-201ENST00000334060 C5orf47Q569G3 176 aa10.63□□□□□ -0.71
SHOX-201ENST00000334060 NDUFA12Q9UI09 145 aa10.63□□□□□ -0.71
SHOX-201ENST00000334060 EIF4EBP3O60516 100 aaPredicted RBP10.63□□□□□ -0.71
SHOX-201ENST00000334060 HAMPP81172 84 aa10.63□□□□□ -0.71
SHOX-201ENST00000334060 LINC00336Q6ZUF6 198 aa10.63□□□□□ -0.71
SHOX-201ENST00000334060 DNAH8Q96JB1 4490 aa10.63□□□□□ -0.71
SHOX-201ENST00000334060 IGLV5-52A0A0A0MRZ9 124 aa10.62□□□□□ -0.71
SHOX-201ENST00000334060 CHTF8P0CG12 524 aa10.62□□□□□ -0.71
SHOX-201ENST00000334060 CNBPP62633 177 aaKnown RBP10.62□□□□□ -0.71
SHOX-201ENST00000334060 PPDPFQ9H3Y8 114 aa10.62□□□□□ -0.71
SHOX-201ENST00000334060 H7C2G1 150 aa10.61□□□□□ -0.71
SHOX-201ENST00000334060 J3KT08 172 aa10.61□□□□□ -0.71
SHOX-201ENST00000334060 NDUFA1O15239 70 aa10.61□□□□□ -0.71
SHOX-201ENST00000334060 KRTAP10-1P60331 282 aa10.61□□□□□ -0.71
SHOX-201ENST00000334060 DAND5Q8N907 189 aa10.61□□□□□ -0.71
SHOX-201ENST00000334060 C2orf48Q96LS8 159 aa10.61□□□□□ -0.71
SHOX-201ENST00000334060 PFN2P35080 140 aa10.6□□□□□ -0.71
SHOX-201ENST00000334060 C9orf153Q5TBE3 101 aa10.6□□□□□ -0.71
SHOX-201ENST00000334060 SDIM1Q6ZPB5 146 aa10.6□□□□□ -0.71
SHOX-201ENST00000334060 C14orf177Q52M58 125 aa10.59□□□□□ -0.71
SHOX-201ENST00000334060 LITAFQ99732 161 aa10.59□□□□□ -0.71
SHOX-201ENST00000334060 FAM30AQ9NZY2 134 aa10.59□□□□□ -0.71
SHOX-201ENST00000334060 Q6ZRP5 223 aa10.59□□□□□ -0.71
SHOX-201ENST00000334060 C9orf163Q8N9P6 203 aa10.59□□□□□ -0.71
SHOX-201ENST00000334060 APOBP04114 4563 aaKnown RBP10.58□□□□□ -0.72
SHOX-201ENST00000334060 INAFM2P0DMQ5 153 aa10.58□□□□□ -0.72
SHOX-201ENST00000334060 A0A096LNI7 61 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 150.3 ms