RNA–Protein interactions for RNA: ENST00000334035.9

CPEB4-202, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 6,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-202ENST00000334035 FAM229AH3BQW9 127 aa4.46□□□□□ -1.7
CPEB4-202ENST00000334035 MRPL34Q9BQ48 92 aaKnown RBP4.46□□□□□ -1.7
CPEB4-202ENST00000334035 IGLV5-48A0A075B6I7 105 aa4.46□□□□□ -1.7
CPEB4-202ENST00000334035 ARHGAP32A7KAX9 2087 aa4.46□□□□□ -1.7
CPEB4-202ENST00000334035 Q75L30 129 aa4.45□□□□□ -1.7
CPEB4-202ENST00000334035 POLEQ07864 2286 aa4.45□□□□□ -1.7
CPEB4-202ENST00000334035 TECTAO75443 2155 aa4.45□□□□□ -1.7
CPEB4-202ENST00000334035 CSNK1G2-AS1Q8NCQ2 148 aa4.45□□□□□ -1.7
CPEB4-202ENST00000334035 EP300Q09472 2414 aaPredicted RBP4.45□□□□□ -1.7
CPEB4-202ENST00000334035 PLXNB1O43157 2135 aa4.45□□□□□ -1.7
CPEB4-202ENST00000334035 C9orf129Q5T035 196 aaKnown RBP4.45□□□□□ -1.7
CPEB4-202ENST00000334035 ANKHD1Q8IWZ3 2542 aaKnown RBP4.45□□□□□ -1.7
CPEB4-202ENST00000334035 ABCA4P78363 2273 aa4.44□□□□□ -1.7
CPEB4-202ENST00000334035 ST20-AS1Q8NBB2 130 aa4.44□□□□□ -1.7
CPEB4-202ENST00000334035 IGLV5-52A0A0A0MRZ9 124 aa4.44□□□□□ -1.7
CPEB4-202ENST00000334035 SPTBN1Q01082 2364 aaKnown RBP4.44□□□□□ -1.7
CPEB4-202ENST00000334035 IGLV5-37A0A075B6J1 123 aa4.43□□□□□ -1.7
CPEB4-202ENST00000334035 OXLD1Q5BKU9 147 aa4.43□□□□□ -1.7
CPEB4-202ENST00000334035 Q8N377 158 aa4.43□□□□□ -1.7
CPEB4-202ENST00000334035 GPR179Q6PRD1 2367 aa4.43□□□□□ -1.7
CPEB4-202ENST00000334035 IGFL1Q6UW32 110 aa4.43□□□□□ -1.7
CPEB4-202ENST00000334035 EPM2AB3EWF7 344 aa4.43□□□□□ -1.7
CPEB4-202ENST00000334035 AKAP6Q13023 2319 aa4.43□□□□□ -1.7
CPEB4-202ENST00000334035 DNAH10OSP0CZ25 163 aa4.43□□□□□ -1.7
CPEB4-202ENST00000334035 Q8NAQ8 132 aa4.43□□□□□ -1.7
CPEB4-202ENST00000334035 MIR22HGQ0VDD5 57 aa4.42□□□□□ -1.7
CPEB4-202ENST00000334035 C8orf17Q9NRJ1 99 aa4.42□□□□□ -1.7
CPEB4-202ENST00000334035 FAM104AQ969W3 186 aa4.42□□□□□ -1.7
CPEB4-202ENST00000334035 IGKV2D-30A0A075B6S6 120 aa4.42□□□□□ -1.7
CPEB4-202ENST00000334035 IGKV2-30P06310 120 aa4.42□□□□□ -1.7
CPEB4-202ENST00000334035 FP248Q71RG6 208 aaPredicted RBP4.41□□□□□ -1.7
CPEB4-202ENST00000334035 KRTAP10-9P60411 292 aa4.41□□□□□ -1.7
CPEB4-202ENST00000334035 SPRR4Q96PI1 79 aa4.41□□□□□ -1.7
CPEB4-202ENST00000334035 LINC00313P59037 77 aa4.4□□□□□ -1.71
CPEB4-202ENST00000334035 A0A1B0GVX0 72 aa4.4□□□□□ -1.71
CPEB4-202ENST00000334035 CREBBPQ92793 2442 aa4.39□□□□□ -1.71
CPEB4-202ENST00000334035 ACACAQ13085 2346 aa4.39□□□□□ -1.71
CPEB4-202ENST00000334035 NCOR1O75376 2440 aa4.39□□□□□ -1.71
CPEB4-202ENST00000334035 SPTBN2O15020 2390 aa4.39□□□□□ -1.71
CPEB4-202ENST00000334035 IGLV7-46A0A075B6I9 117 aa4.39□□□□□ -1.71
CPEB4-202ENST00000334035 A0A1W2PNM2 257 aa4.39□□□□□ -1.71
CPEB4-202ENST00000334035 RBM12B-AS1Q9P1G2 102 aa4.39□□□□□ -1.71
CPEB4-202ENST00000334035 LINC01558Q9Y6Z2 57 aa4.39□□□□□ -1.71
CPEB4-202ENST00000334035 C15orf56Q8N910 161 aa4.38□□□□□ -1.71
CPEB4-202ENST00000334035 ASB16-AS1Q495Z4 193 aa4.38□□□□□ -1.71
CPEB4-202ENST00000334035 CACNA1HO95180 2353 aa4.37□□□□□ -1.71
CPEB4-202ENST00000334035 PHF5AQ7RTV0 110 aaKnown RBP4.37□□□□□ -1.71
CPEB4-202ENST00000334035 CNOT1A5YKK6 2376 aaKnown RBP4.37□□□□□ -1.71
CPEB4-202ENST00000334035 MDFIQ99750 246 aa4.37□□□□□ -1.71
CPEB4-202ENST00000334035 GIG44P09565 113 aaPredicted RBP4.36□□□□□ -1.71
CPEB4-202ENST00000334035 SPINT4Q6UDR6 99 aa4.36□□□□□ -1.71
CPEB4-202ENST00000334035 CYSTM1Q9H1C7 97 aa4.35□□□□□ -1.71
CPEB4-202ENST00000334035 MUC6Q6W4X9 2439 aa4.35□□□□□ -1.71
CPEB4-202ENST00000334035 A0A096LNT2 108 aa4.35□□□□□ -1.71
CPEB4-202ENST00000334035 FAM168BA1KXE4 195 aa4.35□□□□□ -1.71
CPEB4-202ENST00000334035 C19orf73Q9NVV2 129 aa4.35□□□□□ -1.71
CPEB4-202ENST00000334035 SPTAN1Q13813 2472 aaKnown RBP4.35□□□□□ -1.71
CPEB4-202ENST00000334035 C1orf134Q5TEV5 83 aa4.35□□□□□ -1.71
CPEB4-202ENST00000334035 DSCR10P59022 87 aa4.35□□□□□ -1.71
CPEB4-202ENST00000334035 DOPEY2Q9Y3R5 2298 aa4.34□□□□□ -1.71
CPEB4-202ENST00000334035 Q8N9P0 234 aaPredicted RBP4.34□□□□□ -1.71
CPEB4-202ENST00000334035 OXTP01178 125 aa4.34□□□□□ -1.71
CPEB4-202ENST00000334035 SSBP3-AS1Q7Z2R9 100 aa4.33□□□□□ -1.72
CPEB4-202ENST00000334035 IGLV8-61A0A075B6I0 122 aa4.33□□□□□ -1.72
CPEB4-202ENST00000334035 LINC00588Q9Y4M8 146 aa4.33□□□□□ -1.72
CPEB4-202ENST00000334035 RIF1Q5UIP0 2472 aaKnown RBP4.33□□□□□ -1.72
CPEB4-202ENST00000334035 ZFHX2Q9C0A1 2572 aaPredicted RBP4.33□□□□□ -1.72
CPEB4-202ENST00000334035 FAM229BQ4G0N7 80 aa4.32□□□□□ -1.72
CPEB4-202ENST00000334035 PCNX1Q96RV3 2341 aa4.32□□□□□ -1.72
CPEB4-202ENST00000334035 Q5VV11 94 aa4.32□□□□□ -1.72
CPEB4-202ENST00000334035 LINC01554Q52M75 96 aa4.32□□□□□ -1.72
CPEB4-202ENST00000334035 SPACA4Q8TDM5 124 aa4.32□□□□□ -1.72
CPEB4-202ENST00000334035 CNBPP62633 177 aaKnown RBP4.31□□□□□ -1.72
CPEB4-202ENST00000334035 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.31□□□□□ -1.723e-8■■■■□ 23.4
CPEB4-202ENST00000334035 MUC4Q99102 2169 aa4.29□□□□□ -1.72
CPEB4-202ENST00000334035 GVINP1Q7Z2Y8 2422 aa4.29□□□□□ -1.72
CPEB4-202ENST00000334035 RTL8CO15255 209 aa4.29□□□□□ -1.72
CPEB4-202ENST00000334035 CHTF8P0CG12 524 aa4.29□□□□□ -1.72
CPEB4-202ENST00000334035 NBDYA0A0U1RRE5 68 aa4.29□□□□□ -1.72
CPEB4-202ENST00000334035 Q96NJ1 140 aa4.28□□□□□ -1.72
CPEB4-202ENST00000334035 SPRR1AP35321 89 aa4.28□□□□□ -1.72
CPEB4-202ENST00000334035 CRIPTQ9P021 101 aa4.27□□□□□ -1.73
CPEB4-202ENST00000334035 ZNF861PO60384 105 aa4.26□□□□□ -1.73
CPEB4-202ENST00000334035 SPRR1BP22528 89 aa4.25□□□□□ -1.73
CPEB4-202ENST00000334035 PTPRQQ9UMZ3 2332 aa4.25□□□□□ -1.73
CPEB4-202ENST00000334035 HIVEP2P31629 2446 aa4.25□□□□□ -1.73
CPEB4-202ENST00000334035 MMP24-AS1A0A0U1RRL7 71 aa4.25□□□□□ -1.73
CPEB4-202ENST00000334035 MED13LQ71F56 2210 aa4.25□□□□□ -1.73
CPEB4-202ENST00000334035 J3QL48 77 aa4.24□□□□□ -1.73
CPEB4-202ENST00000334035 C9orf163Q8N9P6 203 aa4.24□□□□□ -1.73
CPEB4-202ENST00000334035 A0A0G2JQZ4 141 aa4.24□□□□□ -1.73
CPEB4-202ENST00000334035 A0A1W2PNN7 141 aa4.24□□□□□ -1.73
CPEB4-202ENST00000334035 TYMSOSQ8TAI1 123 aa4.24□□□□□ -1.73
CPEB4-202ENST00000334035 A0A087X002 238 aa4.24□□□□□ -1.73
CPEB4-202ENST00000334035 ZCCHC13Q8WW36 166 aaKnown RBP4.24□□□□□ -1.73
CPEB4-202ENST00000334035 LCE6AA0A183 80 aa4.23□□□□□ -1.73
CPEB4-202ENST00000334035 KRTAP24-1Q3LI83 254 aa4.22□□□□□ -1.73
CPEB4-202ENST00000334035 OTOGLQ3ZCN5 2332 aa4.22□□□□□ -1.73
CPEB4-202ENST00000334035 NOTCH3Q9UM47 2321 aa4.22□□□□□ -1.73
CPEB4-202ENST00000334035 HRES1P13985 223 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 208.2 ms