RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 C9JAW5 83 aa5.89□□□□□ -1.47
LSAMP-201ENST00000333617 ESRGQ1W209 222 aa5.89□□□□□ -1.47
LSAMP-201ENST00000333617 SVIPQ8NHG7 77 aa5.89□□□□□ -1.47
LSAMP-201ENST00000333617 MRAPQ8TCY5 172 aa5.89□□□□□ -1.47
LSAMP-201ENST00000333617 UBE2WQ96B02 151 aa5.89□□□□□ -1.47
LSAMP-201ENST00000333617 VPS25Q9BRG1 176 aa5.89□□□□□ -1.47
LSAMP-201ENST00000333617 KLK5Q9Y337 293 aaPredicted RBP5.89□□□□□ -1.47
LSAMP-201ENST00000333617 STAB2Q8WWQ8 2551 aa5.88□□□□□ -1.47
LSAMP-201ENST00000333617 TRAV10A0A0B4J240 114 aa5.88□□□□□ -1.47
LSAMP-201ENST00000333617 J3QR89 54 aa5.88□□□□□ -1.47
LSAMP-201ENST00000333617 SLC25A20O43772 301 aa5.88□□□□□ -1.47
LSAMP-201ENST00000333617 COX17Q14061 63 aa5.88□□□□□ -1.47
LSAMP-201ENST00000333617 LINC01620Q4KN68 170 aa5.88□□□□□ -1.47
LSAMP-201ENST00000333617 M0QXV9 152 aa5.87□□□□□ -1.47
LSAMP-201ENST00000333617 SPAG11BQ08648 103 aa5.87□□□□□ -1.47
LSAMP-201ENST00000333617 C21orf62-AS1Q17RA5 79 aa5.87□□□□□ -1.47
LSAMP-201ENST00000333617 CLEC2BQ92478 149 aa5.87□□□□□ -1.47
LSAMP-201ENST00000333617 DNHD1Q96M86 4753 aa5.87□□□□□ -1.47
LSAMP-201ENST00000333617 DYNC2H1Q8NCM8 4307 aaKnown RBP5.87□□□□□ -1.47
LSAMP-201ENST00000333617 IGKV2-28A0A075B6P5 120 aa5.86□□□□□ -1.47
LSAMP-201ENST00000333617 LST1O00453 97 aa5.86□□□□□ -1.47
LSAMP-201ENST00000333617 IGKV2D-28P01615 120 aa5.86□□□□□ -1.47
LSAMP-201ENST00000333617 TEN1Q86WV5 123 aa5.86□□□□□ -1.47
LSAMP-201ENST00000333617 LINC00337Q8N6G1 96 aa5.86□□□□□ -1.47
LSAMP-201ENST00000333617 TRBV10-2A0A0K0K1G8 114 aa5.85□□□□□ -1.47
LSAMP-201ENST00000333617 C6orf223Q8N319 242 aa5.85□□□□□ -1.47
LSAMP-201ENST00000333617 C15orf53Q8NAA6 179 aa5.85□□□□□ -1.47
LSAMP-201ENST00000333617 RPL28P46779 137 aaKnown RBP5.84□□□□□ -1.47
LSAMP-201ENST00000333617 LINC01556Q5JQF7 62 aa5.84□□□□□ -1.47
LSAMP-201ENST00000333617 ANKRD29Q8N6D5 301 aa5.84□□□□□ -1.47
LSAMP-201ENST00000333617 PPDPFLQ8WWR9 84 aa5.84□□□□□ -1.47
LSAMP-201ENST00000333617 DNAH1Q9P2D7 4330 aa5.84□□□□□ -1.47
LSAMP-201ENST00000333617 C9orf116Q5BN46 136 aaPredicted RBP5.84□□□□□ -1.48
LSAMP-201ENST00000333617 UNQ6190/PRO20217Q6UXQ8 127 aa5.84□□□□□ -1.48
LSAMP-201ENST00000333617 LINC01600Q96MT4 127 aa5.84□□□□□ -1.48
LSAMP-201ENST00000333617 LYSTQ99698 3801 aa5.83□□□□□ -1.48
LSAMP-201ENST00000333617 H3BT86 120 aa5.83□□□□□ -1.48
LSAMP-201ENST00000333617 C10orf25Q5T742 122 aa5.83□□□□□ -1.48
LSAMP-201ENST00000333617 KRTAP26-1Q6PEX3 210 aa5.83□□□□□ -1.48
LSAMP-201ENST00000333617 MUC7Q8TAX7 377 aa5.83□□□□□ -1.48
LSAMP-201ENST00000333617 LINC00526Q96FQ7 95 aa5.83□□□□□ -1.48
LSAMP-201ENST00000333617 DNAH7Q8WXX0 4024 aa5.83□□□□□ -1.48
LSAMP-201ENST00000333617 NDUFC2O95298 119 aa5.82□□□□□ -1.48
LSAMP-201ENST00000333617 DNAH10OSP0CZ25 163 aa5.82□□□□□ -1.48
LSAMP-201ENST00000333617 OR13C6PQ8NH95 151 aa5.82□□□□□ -1.48
LSAMP-201ENST00000333617 SMIM11BQ8TCY0 68 aa5.82□□□□□ -1.48
LSAMP-201ENST00000333617 NTN5Q8WTR8 489 aaPredicted RBP5.82□□□□□ -1.48
LSAMP-201ENST00000333617 CARD19Q96LW7 228 aa5.82□□□□□ -1.48
LSAMP-201ENST00000333617 C1orf43Q9BWL3 253 aa5.82□□□□□ -1.48
LSAMP-201ENST00000333617 GVQW2A0A096LPI5 108 aaPredicted RBP5.81□□□□□ -1.48
LSAMP-201ENST00000333617 TENM2Q9NT68 2774 aa5.81□□□□□ -1.48
LSAMP-201ENST00000333617 IGKV2D-24A0A075B6R9 120 aa5.8□□□□□ -1.48
LSAMP-201ENST00000333617 TRACP01848 142 aa5.8□□□□□ -1.48
LSAMP-201ENST00000333617 C6orf48Q9UBA6 75 aa5.8□□□□□ -1.48
LSAMP-201ENST00000333617 LINC00588Q9Y4M8 146 aa5.8□□□□□ -1.48
LSAMP-201ENST00000333617 CSMD3Q7Z407 3707 aa5.8□□□□□ -1.48
LSAMP-201ENST00000333617 PLECQ15149 4684 aaKnown RBP5.8□□□□□ -1.48
LSAMP-201ENST00000333617 KRTAP23-1A1A580 65 aa5.8□□□□□ -1.48
LSAMP-201ENST00000333617 H0YGX0 51 aa5.8□□□□□ -1.48
LSAMP-201ENST00000333617 HIGD2BQ4VC39 106 aa5.8□□□□□ -1.48
LSAMP-201ENST00000333617 C15orf56Q8N910 161 aa5.8□□□□□ -1.48
LSAMP-201ENST00000333617 CAMK2N2Q96S95 79 aa5.8□□□□□ -1.48
LSAMP-201ENST00000333617 FBN3Q75N90 2809 aa5.79□□□□□ -1.48
LSAMP-201ENST00000333617 PRR3P79522 188 aaKnown RBP5.79□□□□□ -1.48
LSAMP-201ENST00000333617 C2orf48Q96LS8 159 aa5.79□□□□□ -1.48
LSAMP-201ENST00000333617 FAM218AQ96MZ4 157 aa5.79□□□□□ -1.48
LSAMP-201ENST00000333617 TMEM126AQ9H061 195 aa5.79□□□□□ -1.48
LSAMP-201ENST00000333617 Q9HAA7 133 aa5.78□□□□□ -1.48
LSAMP-201ENST00000333617 DNAH10Q8IVF4 4471 aa5.77□□□□□ -1.49
LSAMP-201ENST00000333617 TEX49A0A1B0GTD5 131 aa5.77□□□□□ -1.49
LSAMP-201ENST00000333617 NCR3O14931 201 aa5.77□□□□□ -1.49
LSAMP-201ENST00000333617 DNAL4O96015 105 aa5.77□□□□□ -1.49
LSAMP-201ENST00000333617 PRKDCP78527 4128 aaKnown RBP5.76□□□□□ -1.49
LSAMP-201ENST00000333617 A0A087WYN8 130 aa5.76□□□□□ -1.49
LSAMP-201ENST00000333617 F8WDY8 70 aa5.76□□□□□ -1.49
LSAMP-201ENST00000333617 BAALC-AS2P0C853 105 aa5.76□□□□□ -1.49
LSAMP-201ENST00000333617 S100A7L2Q5SY68 101 aa5.76□□□□□ -1.49
LSAMP-201ENST00000333617 Q8NDZ9 215 aa5.76□□□□□ -1.49
LSAMP-201ENST00000333617 B9D2Q9BPU9 175 aa5.76□□□□□ -1.49
LSAMP-201ENST00000333617 Q6ZRU5 148 aa5.76□□□□□ -1.49
LSAMP-201ENST00000333617 UPK3BQ9BT76 320 aa5.76□□□□□ -1.49
LSAMP-201ENST00000333617 LECT2O14960 151 aa5.75□□□□□ -1.49
LSAMP-201ENST00000333617 RMI2Q96E14 147 aa5.75□□□□□ -1.49
LSAMP-201ENST00000333617 SIGMAR1Q99720 223 aa5.75□□□□□ -1.49
LSAMP-201ENST00000333617 XAGE1AQ9HD64 81 aa5.75□□□□□ -1.49
LSAMP-201ENST00000333617 NDUFC2-KCTD14E9PQ53 114 aa5.74□□□□□ -1.49
LSAMP-201ENST00000333617 RPL18AQ02543 176 aaKnown RBP5.74□□□□□ -1.49
LSAMP-201ENST00000333617 SYCNQ0VAF6 134 aa5.74□□□□□ -1.49
LSAMP-201ENST00000333617 A0A1B0GX51 115 aa5.73□□□□□ -1.49
LSAMP-201ENST00000333617 IGLV6-57P01721 117 aa5.73□□□□□ -1.49
LSAMP-201ENST00000333617 STARD9Q9P2P6 4700 aa5.73□□□□□ -1.49
LSAMP-201ENST00000333617 C6orf99Q4VX62 202 aa5.72□□□□□ -1.49
LSAMP-201ENST00000333617 USP17L23D6RBM5 183 aa5.72□□□□□ -1.49
LSAMP-201ENST00000333617 C22orf24Q9Y442 160 aa5.72□□□□□ -1.49
LSAMP-201ENST00000333617 SNCGO76070 127 aa5.71□□□□□ -1.5
LSAMP-201ENST00000333617 NHLRC4P0CG21 123 aaPredicted RBP5.71□□□□□ -1.5
LSAMP-201ENST00000333617 GAGE2EQ4V326 116 aa5.71□□□□□ -1.5
LSAMP-201ENST00000333617 Q6ZRP5 223 aa5.71□□□□□ -1.5
LSAMP-201ENST00000333617 UBE2DNLQ8IWF7 75 aa5.71□□□□□ -1.5
LSAMP-201ENST00000333617 Q8N814 137 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms