RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 NOP10Q9NPE3 64 aaKnown RBP12.62□□□□□ -0.39
PKP3-201ENST00000331563 STHQ8IWL8 128 aa12.62□□□□□ -0.39
PKP3-201ENST00000331563 IL17DQ8TAD2 202 aa12.62□□□□□ -0.39
PKP3-201ENST00000331563 NBEAL2Q6ZNJ1 2754 aa12.62□□□□□ -0.39
PKP3-201ENST00000331563 TRGV2A0A075B6R0 118 aa12.61□□□□□ -0.39
PKP3-201ENST00000331563 C4orf3Q8WVX3 66 aa12.61□□□□□ -0.39
PKP3-201ENST00000331563 LY6G6DO95868 133 aa12.61□□□□□ -0.39
PKP3-201ENST00000331563 MPLKIPQ8TAP9 179 aa12.61□□□□□ -0.39
PKP3-201ENST00000331563 TRRAPQ9Y4A5 3859 aa12.61□□□□□ -0.39
PKP3-201ENST00000331563 C1orf158Q8N1D5 194 aa12.6□□□□□ -0.39
PKP3-201ENST00000331563 LINC01006Q8NI28 216 aa12.6□□□□□ -0.39
PKP3-201ENST00000331563 A0A087WZ39 114 aa12.6□□□□□ -0.39
PKP3-201ENST00000331563 TRAV10A0A0B4J240 114 aa12.6□□□□□ -0.39
PKP3-201ENST00000331563 LAMTOR3Q9UHA4 124 aa12.59□□□□□ -0.39
PKP3-201ENST00000331563 LINC00167Q96N53 147 aa12.58□□□□□ -0.4
PKP3-201ENST00000331563 TRGV4A0A0C4DH28 118 aa12.56□□□□□ -0.4
PKP3-201ENST00000331563 PMAIP1Q13794 54 aa12.56□□□□□ -0.4
PKP3-201ENST00000331563 FAM229BQ4G0N7 80 aa12.56□□□□□ -0.4
PKP3-201ENST00000331563 CCL24O00175 119 aa12.56□□□□□ -0.4
PKP3-201ENST00000331563 LINC01547P58512 204 aaPredicted RBP12.56□□□□□ -0.4
PKP3-201ENST00000331563 DEFB114Q30KQ6 69 aa12.55□□□□□ -0.4
PKP3-201ENST00000331563 NANOS2P60321 138 aaKnown RBP12.55□□□□□ -0.4
PKP3-201ENST00000331563 C6orf99Q4VX62 202 aa12.55□□□□□ -0.4
PKP3-201ENST00000331563 F8P00451 2351 aa12.55□□□□□ -0.4
PKP3-201ENST00000331563 MIFP14174 115 aa12.54□□□□□ -0.4
PKP3-201ENST00000331563 TRBV6-8A0A0A6YYG3 113 aa12.52□□□□□ -0.4
PKP3-201ENST00000331563 CLPSL2Q6UWE3 100 aa12.52□□□□□ -0.4
PKP3-201ENST00000331563 LINC00959A0A1B0GUT2 108 aa12.52□□□□□ -0.41
PKP3-201ENST00000331563 Q6ZQT0 140 aa12.52□□□□□ -0.41
PKP3-201ENST00000331563 Q6ZVQ6 151 aa12.52□□□□□ -0.41
PKP3-201ENST00000331563 M0R2N4 97 aa12.51□□□□□ -0.41
PKP3-201ENST00000331563 ODF3L2Q3SX64 289 aa12.51□□□□□ -0.41
PKP3-201ENST00000331563 TRBV7-4A0A0J9YYF1 115 aa12.51□□□□□ -0.41
PKP3-201ENST00000331563 INAFM1C9JVW0 142 aa12.5□□□□□ -0.41
PKP3-201ENST00000331563 TM2D3Q9BRN9 247 aa12.5□□□□□ -0.41
PKP3-201ENST00000331563 WFDC10AQ9H1F0 79 aa12.5□□□□□ -0.41
PKP3-201ENST00000331563 SCXQ7RTU7 201 aa12.49□□□□□ -0.41
PKP3-201ENST00000331563 PRR15Q8IV56 129 aa12.48□□□□□ -0.41
PKP3-201ENST00000331563 Q8N3U1 123 aa12.48□□□□□ -0.41
PKP3-201ENST00000331563 ZNF561-AS1K7EIQ3 104 aa12.47□□□□□ -0.41
PKP3-201ENST00000331563 PLAC8L1A1L4L8 177 aa12.47□□□□□ -0.41
PKP3-201ENST00000331563 ESRGQ1W209 222 aa12.46□□□□□ -0.41
PKP3-201ENST00000331563 Q8IZM0 81 aa12.46□□□□□ -0.42
PKP3-201ENST00000331563 KRTAP10-3P60369 221 aa12.45□□□□□ -0.42
PKP3-201ENST00000331563 LINC00575Q6W349 94 aa12.45□□□□□ -0.42
PKP3-201ENST00000331563 Q6ZRU5 148 aa12.45□□□□□ -0.42
PKP3-201ENST00000331563 TMEM254Q8TBM7 123 aa12.45□□□□□ -0.42
PKP3-201ENST00000331563 C9orf116Q5BN46 136 aaPredicted RBP12.44□□□□□ -0.42
PKP3-201ENST00000331563 LOC110117498A0A087WWA1 95 aa12.44□□□□□ -0.42
PKP3-201ENST00000331563 CXCL6P80162 114 aa12.43□□□□□ -0.42
PKP3-201ENST00000331563 Q6ZQY7 126 aa12.41□□□□□ -0.42
PKP3-201ENST00000331563 SPATA3Q8NHX4 192 aa12.41□□□□□ -0.42
PKP3-201ENST00000331563 C16orf74Q96GX8 76 aa12.41□□□□□ -0.42
PKP3-201ENST00000331563 NREPQ16612 68 aa12.41□□□□□ -0.42
PKP3-201ENST00000331563 C6orf223Q8N319 242 aa12.41□□□□□ -0.42
PKP3-201ENST00000331563 LINC00269Q8N2A0 174 aa12.4□□□□□ -0.42
PKP3-201ENST00000331563 BAHCC1Q9P281 2608 aa12.38□□□□□ -0.43
PKP3-201ENST00000331563 IGLV10-54A0A075B6I4 117 aa12.38□□□□□ -0.43
PKP3-201ENST00000331563 A0A096LPF7 62 aa12.37□□□□□ -0.43
PKP3-201ENST00000331563 ERC2-IT1O76042 136 aa12.37□□□□□ -0.43
PKP3-201ENST00000331563 DEFB130BP0DP73 79 aa12.37□□□□□ -0.43
PKP3-201ENST00000331563 DEFB130AP0DP74 79 aa12.37□□□□□ -0.43
PKP3-201ENST00000331563 Q8NDZ9 215 aa12.37□□□□□ -0.43
PKP3-201ENST00000331563 PDE6GP18545 87 aa12.36□□□□□ -0.43
PKP3-201ENST00000331563 FUSP35637 526 aaKnown RBP eCLIP12.36□□□□□ -0.432e-10■□□□□ 9.7
PKP3-201ENST00000331563 RETNQ9HD89 108 aa12.36□□□□□ -0.43
PKP3-201ENST00000331563 STAB1Q9NY15 2570 aa12.36□□□□□ -0.43
PKP3-201ENST00000331563 CD164Q04900 197 aa12.36□□□□□ -0.43
PKP3-201ENST00000331563 COX17Q14061 63 aa12.36□□□□□ -0.43
PKP3-201ENST00000331563 MUC7Q8TAX7 377 aa12.35□□□□□ -0.43
PKP3-201ENST00000331563 BPY2O14599 106 aa12.34□□□□□ -0.43
PKP3-201ENST00000331563 PRYO14603 147 aa12.34□□□□□ -0.43
PKP3-201ENST00000331563 Q6ZTC4 211 aa12.34□□□□□ -0.43
PKP3-201ENST00000331563 PKD1L1Q8TDX9 2849 aa12.34□□□□□ -0.43
PKP3-201ENST00000331563 GYPEP15421 78 aa12.33□□□□□ -0.44
PKP3-201ENST00000331563 GIG44P09565 113 aaPredicted RBP12.32□□□□□ -0.44
PKP3-201ENST00000331563 FBN1P35555 2871 aaKnown RBP12.32□□□□□ -0.44
PKP3-201ENST00000331563 MAST4O15021 2626 aa12.31□□□□□ -0.44
PKP3-201ENST00000331563 IGLV1-51P01701 117 aa12.31□□□□□ -0.44
PKP3-201ENST00000331563 KIAA0087Q14695 138 aa12.31□□□□□ -0.44
PKP3-201ENST00000331563 Q8N9L7 120 aa12.31□□□□□ -0.44
PKP3-201ENST00000331563 DAD1P61803 113 aa12.3□□□□□ -0.44
PKP3-201ENST00000331563 C9orf66Q5T8R8 295 aa12.3□□□□□ -0.44
PKP3-201ENST00000331563 CHCHD10Q8WYQ3 142 aaPredicted RBP12.29□□□□□ -0.44
PKP3-201ENST00000331563 CD164L2Q6UWJ8 174 aa12.28□□□□□ -0.44
PKP3-201ENST00000331563 C19orf73Q9NVV2 129 aa12.28□□□□□ -0.44
PKP3-201ENST00000331563 A0A1B0GUV1 79 aa12.28□□□□□ -0.44
PKP3-201ENST00000331563 ANGP03950 147 aaKnown RBP12.27□□□□□ -0.44
PKP3-201ENST00000331563 Q1T7F1 81 aa12.26□□□□□ -0.45
PKP3-201ENST00000331563 UNQ6190/PRO20217Q6UXQ8 127 aa12.26□□□□□ -0.45
PKP3-201ENST00000331563 C10orf25Q5T742 122 aa12.24□□□□□ -0.45
PKP3-201ENST00000331563 IGHV4-28A0A0C4DH34 117 aa12.24□□□□□ -0.45
PKP3-201ENST00000331563 Q6ZRP5 223 aa12.24□□□□□ -0.45
PKP3-201ENST00000331563 DIRC1Q969H9 104 aa12.24□□□□□ -0.45
PKP3-201ENST00000331563 H3BQ85 93 aa12.24□□□□□ -0.45
PKP3-201ENST00000331563 hDV103S1A0JD37 113 aa12.23□□□□□ -0.45
PKP3-201ENST00000331563 COL6A5A8TX70 2615 aa12.23□□□□□ -0.45
PKP3-201ENST00000331563 LRCOL1A6NCL2 159 aa12.22□□□□□ -0.45
PKP3-201ENST00000331563 IGLV6-57P01721 117 aa12.22□□□□□ -0.45
PKP3-201ENST00000331563 OCR1Q9BZK8 76 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms