RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 MIR7-3HGQ8N6C7 128 aa10.85□□□□□ -0.67
PDGFB-201ENST00000331163 FUSP35637 526 aaKnown RBP eCLIP10.84□□□□□ -0.67
PDGFB-201ENST00000331163 TRBV7-7A0A0K0K1E9 115 aa10.84□□□□□ -0.67
PDGFB-201ENST00000331163 IGKV2-24A0A0C4DH68 120 aa10.83□□□□□ -0.67
PDGFB-201ENST00000331163 FAM240AA0A1B0GVK7 77 aa10.83□□□□□ -0.67
PDGFB-201ENST00000331163 SLPIP03973 132 aa10.83□□□□□ -0.67
PDGFB-201ENST00000331163 LINC00588Q9Y4M8 146 aa10.83□□□□□ -0.67
PDGFB-201ENST00000331163 A0A1B0GX51 115 aa10.83□□□□□ -0.68
PDGFB-201ENST00000331163 SMIM1B2RUZ4 78 aa10.82□□□□□ -0.68
PDGFB-201ENST00000331163 RPL18AQ02543 176 aaKnown RBP10.82□□□□□ -0.68
PDGFB-201ENST00000331163 UNQ6190/PRO20217Q6UXQ8 127 aa10.82□□□□□ -0.68
PDGFB-201ENST00000331163 UQCRQO14949 82 aa10.82□□□□□ -0.68
PDGFB-201ENST00000331163 NDUFA1O15239 70 aa10.81□□□□□ -0.68
PDGFB-201ENST00000331163 LINC00612Q8N6U2 182 aa10.81□□□□□ -0.68
PDGFB-201ENST00000331163 ACYP1P07311 99 aa10.81□□□□□ -0.68
PDGFB-201ENST00000331163 FBN3Q75N90 2809 aa10.8□□□□□ -0.68
PDGFB-201ENST00000331163 PRR3P79522 188 aaKnown RBP10.79□□□□□ -0.68
PDGFB-201ENST00000331163 FAM19A5Q7Z5A7 132 aaPredicted RBP10.79□□□□□ -0.68
PDGFB-201ENST00000331163 NCR3O14931 201 aa10.78□□□□□ -0.68
PDGFB-201ENST00000331163 C9orf129Q5T035 196 aaKnown RBP10.78□□□□□ -0.68
PDGFB-201ENST00000331163 MEGF8Q7Z7M0 2845 aa10.78□□□□□ -0.68
PDGFB-201ENST00000331163 CD164L2Q6UWJ8 174 aa10.78□□□□□ -0.68
PDGFB-201ENST00000331163 CSDC2Q9Y534 153 aaKnown RBP10.78□□□□□ -0.68
PDGFB-201ENST00000331163 DSCR8Q96T75 97 aa10.77□□□□□ -0.68
PDGFB-201ENST00000331163 COL7A1Q02388 2944 aa10.77□□□□□ -0.69
PDGFB-201ENST00000331163 INAFM2P0DMQ5 153 aa10.77□□□□□ -0.69
PDGFB-201ENST00000331163 SND1-IT1Q9HBX3 110 aa10.77□□□□□ -0.69
PDGFB-201ENST00000331163 A0A087WYN8 130 aa10.77□□□□□ -0.69
PDGFB-201ENST00000331163 S100A7L2Q5SY68 101 aa10.76□□□□□ -0.69
PDGFB-201ENST00000331163 ENHOQ6UWT2 76 aa10.76□□□□□ -0.69
PDGFB-201ENST00000331163 TRACP01848 142 aa10.76□□□□□ -0.69
PDGFB-201ENST00000331163 COX7CP15954 63 aa10.76□□□□□ -0.69
PDGFB-201ENST00000331163 CYSTM1Q9H1C7 97 aa10.76□□□□□ -0.69
PDGFB-201ENST00000331163 DNHD1Q96M86 4753 aa10.76□□□□□ -0.69
PDGFB-201ENST00000331163 J3KT08 172 aa10.75□□□□□ -0.69
PDGFB-201ENST00000331163 IGHV3OR16-9A0A0B4J2B5 98 aa10.75□□□□□ -0.69
PDGFB-201ENST00000331163 IMUPQ9GZP8 106 aa10.74□□□□□ -0.69
PDGFB-201ENST00000331163 C10orf25Q5T742 122 aa10.74□□□□□ -0.69
PDGFB-201ENST00000331163 CASC10Q5T4H9 136 aa10.73□□□□□ -0.69
PDGFB-201ENST00000331163 A0A1B0GUV1 79 aa10.73□□□□□ -0.69
PDGFB-201ENST00000331163 LINC00337Q8N6G1 96 aa10.73□□□□□ -0.69
PDGFB-201ENST00000331163 TIMM17BO60830 172 aa10.72□□□□□ -0.69
PDGFB-201ENST00000331163 COPS9Q8WXC6 57 aa10.72□□□□□ -0.69
PDGFB-201ENST00000331163 LINC00846Q9NV44 126 aa10.72□□□□□ -0.69
PDGFB-201ENST00000331163 SMIM11BQ8TCY0 68 aa10.72□□□□□ -0.69
PDGFB-201ENST00000331163 A0A087WZ39 114 aa10.71□□□□□ -0.69
PDGFB-201ENST00000331163 ATOX1O00244 68 aa10.71□□□□□ -0.69
PDGFB-201ENST00000331163 TRAV23DV6A0A075B6W5 121 aa10.7□□□□□ -0.7
PDGFB-201ENST00000331163 NUPR2A6NF83 97 aa10.7□□□□□ -0.7
PDGFB-201ENST00000331163 TRAV13-2A0A0B4J235 113 aa10.69□□□□□ -0.7
PDGFB-201ENST00000331163 USP17L23D6RBM5 183 aa10.69□□□□□ -0.7
PDGFB-201ENST00000331163 RMI2Q96E14 147 aa10.67□□□□□ -0.7
PDGFB-201ENST00000331163 LINC01600Q96MT4 127 aa10.67□□□□□ -0.7
PDGFB-201ENST00000331163 CSMD3Q7Z407 3707 aa10.67□□□□□ -0.7
PDGFB-201ENST00000331163 IGLV5-39A0A0G2JS06 123 aa10.66□□□□□ -0.7
PDGFB-201ENST00000331163 CXCL5P42830 114 aa10.66□□□□□ -0.7
PDGFB-201ENST00000331163 MUC7Q8TAX7 377 aa10.66□□□□□ -0.7
PDGFB-201ENST00000331163 C22orf24Q9Y442 160 aa10.66□□□□□ -0.7
PDGFB-201ENST00000331163 DNAH10OSP0CZ25 163 aa10.65□□□□□ -0.7
PDGFB-201ENST00000331163 SYCNQ0VAF6 134 aa10.65□□□□□ -0.7
PDGFB-201ENST00000331163 C5orf47Q569G3 176 aa10.65□□□□□ -0.7
PDGFB-201ENST00000331163 Q6ZRU5 148 aa10.65□□□□□ -0.7
PDGFB-201ENST00000331163 HRCT1Q6UXD1 115 aa10.64□□□□□ -0.71
PDGFB-201ENST00000331163 IGKV2-28A0A075B6P5 120 aa10.64□□□□□ -0.71
PDGFB-201ENST00000331163 IGKV2D-28P01615 120 aa10.64□□□□□ -0.71
PDGFB-201ENST00000331163 LINC01556Q5JQF7 62 aa10.64□□□□□ -0.71
PDGFB-201ENST00000331163 ANK2Q01484 3957 aa10.64□□□□□ -0.71
PDGFB-201ENST00000331163 C4orf26Q17RF5 130 aa10.63□□□□□ -0.71
PDGFB-201ENST00000331163 C2orf48Q96LS8 159 aa10.63□□□□□ -0.71
PDGFB-201ENST00000331163 IGLV5-45A0A087WSX0 123 aa10.62□□□□□ -0.71
PDGFB-201ENST00000331163 NKAPP1Q8N9T2 125 aa10.62□□□□□ -0.71
PDGFB-201ENST00000331163 C20orf197Q8N268 126 aa10.62□□□□□ -0.71
PDGFB-201ENST00000331163 GHRHP01286 108 aa10.61□□□□□ -0.71
PDGFB-201ENST00000331163 FAM19A1Q7Z5A9 133 aa10.61□□□□□ -0.71
PDGFB-201ENST00000331163 SERP2Q8N6R1 65 aa10.61□□□□□ -0.71
PDGFB-201ENST00000331163 RPL37AP8A6NKH3 93 aa10.61□□□□□ -0.71
PDGFB-201ENST00000331163 RPL28P46779 137 aaKnown RBP10.61□□□□□ -0.71
PDGFB-201ENST00000331163 CRYGAP11844 174 aa10.59□□□□□ -0.71
PDGFB-201ENST00000331163 LINC01561Q8N1V8 128 aa10.59□□□□□ -0.71
PDGFB-201ENST00000331163 PKIGQ9Y2B9 76 aa10.59□□□□□ -0.71
PDGFB-201ENST00000331163 Q8IZM0 81 aa10.59□□□□□ -0.71
PDGFB-201ENST00000331163 H3BNG1 76 aa10.59□□□□□ -0.71
PDGFB-201ENST00000331163 ORMDL1Q9P0S3 153 aa10.59□□□□□ -0.71
PDGFB-201ENST00000331163 HAMPP81172 84 aa10.57□□□□□ -0.72
PDGFB-201ENST00000331163 KRTAP1-5Q9BYS1 174 aa10.57□□□□□ -0.72
PDGFB-201ENST00000331163 APLNQ9ULZ1 77 aa10.57□□□□□ -0.72
PDGFB-201ENST00000331163 H0YGX0 51 aa10.56□□□□□ -0.72
PDGFB-201ENST00000331163 IBA57-AS1B1ANH7 110 aa10.56□□□□□ -0.72
PDGFB-201ENST00000331163 UBE2BP63146 152 aa10.56□□□□□ -0.72
PDGFB-201ENST00000331163 DEFB105AQ8NG35 78 aa10.55□□□□□ -0.72
PDGFB-201ENST00000331163 C6orf48Q9UBA6 75 aa10.55□□□□□ -0.72
PDGFB-201ENST00000331163 WWC2-AS2Q96NR7 200 aa10.54□□□□□ -0.72
PDGFB-201ENST00000331163 Q6JHZ5 121 aa10.54□□□□□ -0.72
PDGFB-201ENST00000331163 CHTF8P0CG12 524 aa10.54□□□□□ -0.72
PDGFB-201ENST00000331163 LAMTOR3Q9UHA4 124 aa10.54□□□□□ -0.72
PDGFB-201ENST00000331163 OXTP01178 125 aa10.53□□□□□ -0.72
PDGFB-201ENST00000331163 NBDYA0A0U1RRE5 68 aa10.53□□□□□ -0.72
PDGFB-201ENST00000331163 TMEM258P61165 79 aa10.53□□□□□ -0.72
PDGFB-201ENST00000331163 PRR34Q9NV39 138 aa10.52□□□□□ -0.72
PDGFB-201ENST00000331163 SNURFQ9Y675 71 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 153 ms