RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 USP9XQ93008 2570 aaPredicted RBP7.76□□□□□ -1.17
COL4A5-201ENST00000328300 KRTAP1-1Q07627 177 aa7.75□□□□□ -1.17
COL4A5-201ENST00000328300 ABCA12Q86UK0 2595 aa7.75□□□□□ -1.17
COL4A5-201ENST00000328300 PRO0628Q9UI54 55 aa7.75□□□□□ -1.17
COL4A5-201ENST00000328300 PKD1L2Q7Z442 2459 aa7.75□□□□□ -1.17
COL4A5-201ENST00000328300 A0A087WSZ3 146 aa7.75□□□□□ -1.17
COL4A5-201ENST00000328300 RTL8CO15255 209 aa7.74□□□□□ -1.17
COL4A5-201ENST00000328300 Q6ZRX8 168 aa7.74□□□□□ -1.17
COL4A5-201ENST00000328300 AGRNO00468 2067 aa7.74□□□□□ -1.17
COL4A5-201ENST00000328300 Q6ZRP5 223 aa7.74□□□□□ -1.17
COL4A5-201ENST00000328300 PRR34Q9NV39 138 aa7.73□□□□□ -1.17
COL4A5-201ENST00000328300 K7EIL1 84 aa7.73□□□□□ -1.17
COL4A5-201ENST00000328300 PRLHP81277 87 aa7.73□□□□□ -1.17
COL4A5-201ENST00000328300 LRRK2Q5S007 2527 aa7.73□□□□□ -1.17
COL4A5-201ENST00000328300 LOC110117498A0A087WWA1 95 aa7.73□□□□□ -1.17
COL4A5-201ENST00000328300 H0Y9P7 68 aa7.72□□□□□ -1.17
COL4A5-201ENST00000328300 CRYGAP11844 174 aa7.72□□□□□ -1.17
COL4A5-201ENST00000328300 VPREB1P12018 145 aa7.72□□□□□ -1.17
COL4A5-201ENST00000328300 PCOTHQ58A44 107 aa7.72□□□□□ -1.17
COL4A5-201ENST00000328300 TM2D3Q9BRN9 247 aa7.72□□□□□ -1.17
COL4A5-201ENST00000328300 SMCPP49901 116 aaPredicted RBP7.72□□□□□ -1.17
COL4A5-201ENST00000328300 KRTAP10-11P60412 298 aa7.72□□□□□ -1.17
COL4A5-201ENST00000328300 Q8NBF4 154 aa7.72□□□□□ -1.17
COL4A5-201ENST00000328300 HCG22E2RYF7 251 aa7.71□□□□□ -1.17
COL4A5-201ENST00000328300 IGHV6-1A0A0B4J1U7 121 aa7.71□□□□□ -1.18
COL4A5-201ENST00000328300 SPTBN4Q9H254 2564 aa7.71□□□□□ -1.18
COL4A5-201ENST00000328300 KRTAP10-3P60369 221 aa7.71□□□□□ -1.18
COL4A5-201ENST00000328300 KIAA0087Q14695 138 aa7.7□□□□□ -1.18
COL4A5-201ENST00000328300 GIG44P09565 113 aaPredicted RBP7.7□□□□□ -1.18
COL4A5-201ENST00000328300 hDV103S1A0JD37 113 aa7.7□□□□□ -1.18
COL4A5-201ENST00000328300 TP53AIP1Q9HCN2 124 aa7.7□□□□□ -1.18
COL4A5-201ENST00000328300 PRO0461Q9UI25 63 aa7.7□□□□□ -1.18
COL4A5-201ENST00000328300 Q9UF83 564 aa7.69□□□□□ -1.18
COL4A5-201ENST00000328300 IGLV6-57P01721 117 aa7.69□□□□□ -1.18
COL4A5-201ENST00000328300 LITAFQ99732 161 aa7.69□□□□□ -1.18
COL4A5-201ENST00000328300 CHD8Q9HCK8 2581 aa7.68□□□□□ -1.18
COL4A5-201ENST00000328300 FAM229AH3BQW9 127 aa7.68□□□□□ -1.18
COL4A5-201ENST00000328300 RPS28P62857 69 aaKnown RBP7.68□□□□□ -1.18
COL4A5-201ENST00000328300 PLA2G2DQ9UNK4 145 aa7.68□□□□□ -1.18
COL4A5-201ENST00000328300 USP9YO00507 2555 aaPredicted RBP7.67□□□□□ -1.18
COL4A5-201ENST00000328300 TLX1NBP0CAT3 122 aa7.67□□□□□ -1.18
COL4A5-201ENST00000328300 WIPF1O43516 503 aa7.67□□□□□ -1.18
COL4A5-201ENST00000328300 DEFB116Q30KQ4 102 aa7.66□□□□□ -1.18
COL4A5-201ENST00000328300 ANKRD17O75179 2603 aaKnown RBP7.66□□□□□ -1.18
COL4A5-201ENST00000328300 JMJD1CQ15652 2540 aa7.65□□□□□ -1.18
COL4A5-201ENST00000328300 C4orf26Q17RF5 130 aa7.65□□□□□ -1.18
COL4A5-201ENST00000328300 H3BPC8 53 aa7.65□□□□□ -1.18
COL4A5-201ENST00000328300 KCNQ1DNQ9H478 68 aa7.65□□□□□ -1.19
COL4A5-201ENST00000328300 PLA2G1BP04054 148 aaKnown RBP7.64□□□□□ -1.19
COL4A5-201ENST00000328300 EPM2AB3EWF7 344 aa7.64□□□□□ -1.19
COL4A5-201ENST00000328300 SMIM29Q86T20 159 aa7.64□□□□□ -1.19
COL4A5-201ENST00000328300 C1orf64Q8NEQ6 169 aa7.63□□□□□ -1.19
COL4A5-201ENST00000328300 Q6ZQT0 140 aa7.63□□□□□ -1.19
COL4A5-201ENST00000328300 PHF5AQ7RTV0 110 aaKnown RBP7.63□□□□□ -1.19
COL4A5-201ENST00000328300 IGLV1-50A0A075B6I6 118 aa7.62□□□□□ -1.19
COL4A5-201ENST00000328300 TRBV7-4A0A0J9YYF1 115 aa7.62□□□□□ -1.19
COL4A5-201ENST00000328300 RPL37AP61513 92 aaKnown RBP7.62□□□□□ -1.19
COL4A5-201ENST00000328300 RETNLBQ9BQ08 111 aa7.61□□□□□ -1.19
COL4A5-201ENST00000328300 LINC00336Q6ZUF6 198 aa7.61□□□□□ -1.19
COL4A5-201ENST00000328300 MOBPQ13875 183 aa7.61□□□□□ -1.19
COL4A5-201ENST00000328300 FAM218AQ96MZ4 157 aa7.61□□□□□ -1.19
COL4A5-201ENST00000328300 SPINK1P00995 79 aa7.6□□□□□ -1.19
COL4A5-201ENST00000328300 LINC00476Q8WZB0 136 aa7.6□□□□□ -1.19
COL4A5-201ENST00000328300 ZFYVE26Q68DK2 2539 aa7.59□□□□□ -1.19
COL4A5-201ENST00000328300 TLN2Q9Y4G6 2542 aa7.59□□□□□ -1.19
COL4A5-201ENST00000328300 C8orf87E5RJ46 101 aa7.59□□□□□ -1.19
COL4A5-201ENST00000328300 FN1P02751 2386 aaKnown RBP7.59□□□□□ -1.19
COL4A5-201ENST00000328300 SERTAD4-AS1Q5TG53 156 aa7.59□□□□□ -1.19
COL4A5-201ENST00000328300 C15orf56Q8N910 161 aa7.59□□□□□ -1.2
COL4A5-201ENST00000328300 APLNQ9ULZ1 77 aa7.58□□□□□ -1.2
COL4A5-201ENST00000328300 WDR87Q6ZQQ6 2873 aa7.58□□□□□ -1.2
COL4A5-201ENST00000328300 CNBPP62633 177 aaKnown RBP7.58□□□□□ -1.2
COL4A5-201ENST00000328300 LINC00528Q8N1L1 170 aa7.57□□□□□ -1.2
COL4A5-201ENST00000328300 C9orf163Q8N9P6 203 aa7.57□□□□□ -1.2
COL4A5-201ENST00000328300 MUC4Q99102 2169 aa7.56□□□□□ -1.2
COL4A5-201ENST00000328300 TYMSOSQ8TAI1 123 aa7.56□□□□□ -1.2
COL4A5-201ENST00000328300 A0A087WTM6 91 aa7.55□□□□□ -1.2
COL4A5-201ENST00000328300 SSBP3-AS1Q7Z2R9 100 aa7.55□□□□□ -1.2
COL4A5-201ENST00000328300 SPAG11AQ6PDA7 123 aa7.54□□□□□ -1.2
COL4A5-201ENST00000328300 A0A1B0GU69 56 aa7.53□□□□□ -1.2
COL4A5-201ENST00000328300 ZNF575Q86XF7 245 aa7.53□□□□□ -1.2
COL4A5-201ENST00000328300 IGLV5-37A0A075B6J1 123 aa7.52□□□□□ -1.2
COL4A5-201ENST00000328300 SPACA4Q8TDM5 124 aa7.51□□□□□ -1.21
COL4A5-201ENST00000328300 ZNF861PO60384 105 aa7.5□□□□□ -1.21
COL4A5-201ENST00000328300 ACYP2P14621 99 aa7.5□□□□□ -1.21
COL4A5-201ENST00000328300 LINC00313P59037 77 aa7.5□□□□□ -1.21
COL4A5-201ENST00000328300 ST20-AS1Q8NBB2 130 aa7.5□□□□□ -1.21
COL4A5-201ENST00000328300 CHTF8P0CG12 524 aa7.49□□□□□ -1.21
COL4A5-201ENST00000328300 EPG5Q9HCE0 2579 aa7.49□□□□□ -1.21
COL4A5-201ENST00000328300 A8MWP4 228 aa7.49□□□□□ -1.21
COL4A5-201ENST00000328300 ERC2-IT1O76042 136 aa7.48□□□□□ -1.21
COL4A5-201ENST00000328300 MTORP42345 2549 aa7.48□□□□□ -1.21
COL4A5-201ENST00000328300 IGKV2D-30A0A075B6S6 120 aa7.48□□□□□ -1.21
COL4A5-201ENST00000328300 IGKV2-30P06310 120 aa7.48□□□□□ -1.21
COL4A5-201ENST00000328300 C9orf129Q5T035 196 aaKnown RBP7.48□□□□□ -1.21
COL4A5-201ENST00000328300 FASNP49327 2511 aaKnown RBP7.47□□□□□ -1.21
COL4A5-201ENST00000328300 C7orf65Q6ZTY9 151 aa7.47□□□□□ -1.21
COL4A5-201ENST00000328300 LOC101927531A0A1B0GV80 90 aa7.47□□□□□ -1.21
COL4A5-201ENST00000328300 FAM168BA1KXE4 195 aa7.46□□□□□ -1.21
COL4A5-201ENST00000328300 POLQO75417 2590 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms