RNA–Protein interactions for RNA: ENST00000317173.8

MSRA-201, Transcript of methionine sulfoxide reductase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRA, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-201ENST00000317173 DYNC1H1Q14204 4646 aaKnown RBP9.11□□□□□ -0.95
MSRA-201ENST00000317173 A6NDN8 102 aa9.1□□□□□ -0.95
MSRA-201ENST00000317173 SNHG12Q9BXW3 62 aa9.1□□□□□ -0.95
MSRA-201ENST00000317173 A4D1N5 150 aa9.1□□□□□ -0.95
MSRA-201ENST00000317173 NPC2P61916 151 aa9.1□□□□□ -0.95
MSRA-201ENST00000317173 NDUFC2O95298 119 aa9.09□□□□□ -0.95
MSRA-201ENST00000317173 BATFQ16520 125 aa9.09□□□□□ -0.95
MSRA-201ENST00000317173 Q6ZRP5 223 aa9.09□□□□□ -0.95
MSRA-201ENST00000317173 HERC2O95714 4834 aa9.08□□□□□ -0.96
MSRA-201ENST00000317173 C16orf90A8MZG2 172 aa9.08□□□□□ -0.96
MSRA-201ENST00000317173 EIF4EBP3O60516 100 aaPredicted RBP9.08□□□□□ -0.96
MSRA-201ENST00000317173 KIAA1109Q2LD37 5005 aa9.08□□□□□ -0.96
MSRA-201ENST00000317173 A0A0B4J2C4 111 aa9.07□□□□□ -0.96
MSRA-201ENST00000317173 A0A1B0GWB2 263 aa9.07□□□□□ -0.96
MSRA-201ENST00000317173 RPL18AQ02543 176 aaKnown RBP9.07□□□□□ -0.96
MSRA-201ENST00000317173 LBHQ53QV2 105 aaPredicted RBP9.06□□□□□ -0.96
MSRA-201ENST00000317173 NHP2Q9NX24 153 aaKnown RBP9.06□□□□□ -0.96
MSRA-201ENST00000317173 GAGE2EQ4V326 116 aa9.05□□□□□ -0.96
MSRA-201ENST00000317173 XAGE1AQ9HD64 81 aa9.05□□□□□ -0.96
MSRA-201ENST00000317173 GAGE2DQ9UEU5 116 aa9.05□□□□□ -0.96
MSRA-201ENST00000317173 CFC1BP0CG36 223 aa9.05□□□□□ -0.96
MSRA-201ENST00000317173 CFC1P0CG37 223 aa9.05□□□□□ -0.96
MSRA-201ENST00000317173 COL5A1-AS1Q5SY13 56 aa9.05□□□□□ -0.96
MSRA-201ENST00000317173 PLA2G2DQ9UNK4 145 aa9.05□□□□□ -0.96
MSRA-201ENST00000317173 IGLV5-52A0A0A0MRZ9 124 aa9.04□□□□□ -0.96
MSRA-201ENST00000317173 GAGE2BQ13066 116 aa9.04□□□□□ -0.96
MSRA-201ENST00000317173 C9orf129Q5T035 196 aaKnown RBP9.03□□□□□ -0.96
MSRA-201ENST00000317173 SDIM1Q6ZPB5 146 aa9.03□□□□□ -0.96
MSRA-201ENST00000317173 RAB37Q96AX2 223 aa9.03□□□□□ -0.96
MSRA-201ENST00000317173 PGPEP1Q9NXJ5 209 aa9.03□□□□□ -0.96
MSRA-201ENST00000317173 LINC00474Q9P2X8 69 aa9.03□□□□□ -0.96
MSRA-201ENST00000317173 TRAV13-2A0A0B4J235 113 aa9.02□□□□□ -0.97
MSRA-201ENST00000317173 TRBV10-2A0A0K0K1G8 114 aa9.02□□□□□ -0.97
MSRA-201ENST00000317173 PRO1854Q9UHT4 67 aa9.02□□□□□ -0.97
MSRA-201ENST00000317173 A0A096LNI7 61 aa9.01□□□□□ -0.97
MSRA-201ENST00000317173 IGKV2-28A0A075B6P5 120 aa9□□□□□ -0.97
MSRA-201ENST00000317173 IGKV2D-28P01615 120 aa9□□□□□ -0.97
MSRA-201ENST00000317173 VPREB1P12018 145 aa9□□□□□ -0.97
MSRA-201ENST00000317173 KRTAP10-2P60368 255 aa9□□□□□ -0.97
MSRA-201ENST00000317173 K7ERJ3 54 aa9□□□□□ -0.97
MSRA-201ENST00000317173 CDK2AP2O75956 126 aa9□□□□□ -0.97
MSRA-201ENST00000317173 IGLV5-37A0A075B6J1 123 aa8.99□□□□□ -0.97
MSRA-201ENST00000317173 LINC00337Q8N6G1 96 aa8.98□□□□□ -0.97
MSRA-201ENST00000317173 Q8NDZ9 215 aa8.98□□□□□ -0.97
MSRA-201ENST00000317173 IGKV2-24A0A0C4DH68 120 aa8.97□□□□□ -0.97
MSRA-201ENST00000317173 TMEM126AQ9H061 195 aa8.97□□□□□ -0.97
MSRA-201ENST00000317173 RYR1P21817 5038 aa8.97□□□□□ -0.97
MSRA-201ENST00000317173 LRP1BQ9NZR2 4599 aa8.97□□□□□ -0.97
MSRA-201ENST00000317173 M0R378 163 aa8.96□□□□□ -0.97
MSRA-201ENST00000317173 TAX1BP3O14907 124 aa8.96□□□□□ -0.97
MSRA-201ENST00000317173 RPL13AP40429 203 aaKnown RBP8.96□□□□□ -0.97
MSRA-201ENST00000317173 LINC01620Q4KN68 170 aa8.96□□□□□ -0.97
MSRA-201ENST00000317173 NKAPP1Q8N9T2 125 aa8.96□□□□□ -0.97
MSRA-201ENST00000317173 NCR3O14931 201 aa8.95□□□□□ -0.98
MSRA-201ENST00000317173 PRR3P79522 188 aaKnown RBP8.95□□□□□ -0.98
MSRA-201ENST00000317173 SERTAD4-AS1Q5TG53 156 aa8.95□□□□□ -0.98
MSRA-201ENST00000317173 CBY1Q9Y3M2 126 aa8.95□□□□□ -0.98
MSRA-201ENST00000317173 S100A7L2Q5SY68 101 aa8.95□□□□□ -0.98
MSRA-201ENST00000317173 OR13C6PQ8NH95 151 aa8.95□□□□□ -0.98
MSRA-201ENST00000317173 SPACA4Q8TDM5 124 aa8.95□□□□□ -0.98
MSRA-201ENST00000317173 C9orf118A6NHY6 69 aa8.94□□□□□ -0.98
MSRA-201ENST00000317173 TSPAN13O95857 204 aa8.94□□□□□ -0.98
MSRA-201ENST00000317173 CHTF8P0CG12 524 aa8.94□□□□□ -0.98
MSRA-201ENST00000317173 FAM168BA1KXE4 195 aa8.93□□□□□ -0.98
MSRA-201ENST00000317173 IGLV6-57P01721 117 aa8.93□□□□□ -0.98
MSRA-201ENST00000317173 FUSP35637 526 aaKnown RBP eCLIP8.93□□□□□ -0.98
MSRA-201ENST00000317173 Q1RN00 199 aa8.93□□□□□ -0.98
MSRA-201ENST00000317173 FAM19A5Q7Z5A7 132 aaPredicted RBP8.92□□□□□ -0.98
MSRA-201ENST00000317173 KRTAP7-1Q8IUC3 87 aa8.92□□□□□ -0.98
MSRA-201ENST00000317173 C22orf24Q9Y442 160 aa8.92□□□□□ -0.98
MSRA-201ENST00000317173 DNAH5Q8TE73 4624 aa8.92□□□□□ -0.98
MSRA-201ENST00000317173 HSPG2P98160 4391 aa8.91□□□□□ -0.98
MSRA-201ENST00000317173 A0A1W2PNN7 141 aa8.91□□□□□ -0.98
MSRA-201ENST00000317173 EPM2AB3EWF7 344 aa8.91□□□□□ -0.98
MSRA-201ENST00000317173 MRPL55Q7Z7F7 128 aaKnown RBP8.91□□□□□ -0.98
MSRA-201ENST00000317173 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.91□□□□□ -0.98
MSRA-201ENST00000317173 H7C2G1 150 aa8.9□□□□□ -0.98
MSRA-201ENST00000317173 M0QXV9 152 aa8.9□□□□□ -0.98
MSRA-201ENST00000317173 RPL28P46779 137 aaKnown RBP8.9□□□□□ -0.98
MSRA-201ENST00000317173 C7orf33Q8WU49 177 aa8.9□□□□□ -0.98
MSRA-201ENST00000317173 TRBV10-3A0A0K0K1G6 114 aa8.9□□□□□ -0.99
MSRA-201ENST00000317173 H3BUT2 72 aa8.9□□□□□ -0.99
MSRA-201ENST00000317173 LYRM7Q5U5X0 104 aa8.9□□□□□ -0.99
MSRA-201ENST00000317173 APOBP04114 4563 aaKnown RBP8.89□□□□□ -0.99
MSRA-201ENST00000317173 PANO1I0J062 215 aa8.89□□□□□ -0.99
MSRA-201ENST00000317173 COX6CP09669 75 aa8.89□□□□□ -0.99
MSRA-201ENST00000317173 PSMB2P49721 201 aa8.89□□□□□ -0.99
MSRA-201ENST00000317173 SMIM11BQ8TCY0 68 aa8.89□□□□□ -0.99
MSRA-201ENST00000317173 DPH3Q96FX2 82 aa8.89□□□□□ -0.99
MSRA-201ENST00000317173 PCLOQ9Y6V0 5065 aa8.88□□□□□ -0.99
MSRA-201ENST00000317173 LINC00167Q96N53 147 aa8.88□□□□□ -0.99
MSRA-201ENST00000317173 PLAC8Q9NZF1 115 aa8.88□□□□□ -0.99
MSRA-201ENST00000317173 TRAV23DV6A0A075B6W5 121 aa8.87□□□□□ -0.99
MSRA-201ENST00000317173 A0A087WYN8 130 aa8.87□□□□□ -0.99
MSRA-201ENST00000317173 A0A1W2PPM0 123 aa8.87□□□□□ -0.99
MSRA-201ENST00000317173 Q6ZSA8 131 aa8.87□□□□□ -0.99
MSRA-201ENST00000317173 KCNQ1DNQ9H478 68 aa8.87□□□□□ -0.99
MSRA-201ENST00000317173 IGLV1-50A0A075B6I6 118 aa8.86□□□□□ -0.99
MSRA-201ENST00000317173 TRIAP1O43715 76 aa8.86□□□□□ -0.99
MSRA-201ENST00000317173 KRTAP10-1P60331 282 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms