RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 NBEAQ8NFP9 2946 aa7.86□□□□□ -1.15
PCDHGC3-201ENST00000308177 TMEM258P61165 79 aa7.85□□□□□ -1.15
PCDHGC3-201ENST00000308177 LY6G6CO95867 125 aa7.85□□□□□ -1.15
PCDHGC3-201ENST00000308177 ZNF575Q86XF7 245 aa7.85□□□□□ -1.15
PCDHGC3-201ENST00000308177 LINC00474Q9P2X8 69 aa7.85□□□□□ -1.15
PCDHGC3-201ENST00000308177 KRTAP10-3P60369 221 aa7.85□□□□□ -1.15
PCDHGC3-201ENST00000308177 SMCPP49901 116 aaPredicted RBP7.84□□□□□ -1.15
PCDHGC3-201ENST00000308177 C20orf197Q8N268 126 aa7.84□□□□□ -1.15
PCDHGC3-201ENST00000308177 SPEGQ15772 3267 aa7.84□□□□□ -1.15
PCDHGC3-201ENST00000308177 SETXQ7Z333 2677 aaKnown RBP7.84□□□□□ -1.15
PCDHGC3-201ENST00000308177 LINC00575Q6W349 94 aa7.84□□□□□ -1.15
PCDHGC3-201ENST00000308177 LITAFQ99732 161 aa7.83□□□□□ -1.16
PCDHGC3-201ENST00000308177 PRO0461Q9UI25 63 aa7.83□□□□□ -1.16
PCDHGC3-201ENST00000308177 C4orf48Q5BLP8 95 aa7.83□□□□□ -1.16
PCDHGC3-201ENST00000308177 Q6JHZ5 121 aa7.83□□□□□ -1.16
PCDHGC3-201ENST00000308177 PLAC8L1A1L4L8 177 aa7.83□□□□□ -1.16
PCDHGC3-201ENST00000308177 C10orf25Q5T742 122 aa7.83□□□□□ -1.16
PCDHGC3-201ENST00000308177 FREM2Q5SZK8 3169 aa7.82□□□□□ -1.16
PCDHGC3-201ENST00000308177 FLNCQ14315 2725 aa7.82□□□□□ -1.16
PCDHGC3-201ENST00000308177 DMXL2Q8TDJ6 3036 aa7.82□□□□□ -1.16
PCDHGC3-201ENST00000308177 ADGRG4Q8IZF6 3080 aa7.82□□□□□ -1.16
PCDHGC3-201ENST00000308177 C6orf48Q9UBA6 75 aa7.82□□□□□ -1.16
PCDHGC3-201ENST00000308177 ATMQ13315 3056 aa7.81□□□□□ -1.16
PCDHGC3-201ENST00000308177 C3orf22Q8N5N4 141 aa7.81□□□□□ -1.16
PCDHGC3-201ENST00000308177 REG3GQ6UW15 175 aa7.81□□□□□ -1.16
PCDHGC3-201ENST00000308177 TEP1Q99973 2627 aaKnown RBP7.8□□□□□ -1.16
PCDHGC3-201ENST00000308177 UNC79Q9P2D8 2635 aa7.8□□□□□ -1.16
PCDHGC3-201ENST00000308177 CHD6Q8TD26 2715 aa7.8□□□□□ -1.16
PCDHGC3-201ENST00000308177 MRPL55Q7Z7F7 128 aaKnown RBP7.8□□□□□ -1.16
PCDHGC3-201ENST00000308177 C7orf33Q8WU49 177 aa7.8□□□□□ -1.16
PCDHGC3-201ENST00000308177 LRCOL1A6NCL2 159 aa7.79□□□□□ -1.16
PCDHGC3-201ENST00000308177 NHLRC4P0CG21 123 aaPredicted RBP7.79□□□□□ -1.16
PCDHGC3-201ENST00000308177 SERP2Q8N6R1 65 aa7.79□□□□□ -1.16
PCDHGC3-201ENST00000308177 FAM19A3Q7Z5A8 133 aa7.79□□□□□ -1.16
PCDHGC3-201ENST00000308177 FAM218AQ96MZ4 157 aa7.78□□□□□ -1.16
PCDHGC3-201ENST00000308177 CDIP1Q9H305 208 aa7.78□□□□□ -1.16
PCDHGC3-201ENST00000308177 C1orf137Q5JT78 98 aa7.78□□□□□ -1.16
PCDHGC3-201ENST00000308177 PRYO14603 147 aa7.77□□□□□ -1.16
PCDHGC3-201ENST00000308177 LINC00612Q8N6U2 182 aa7.77□□□□□ -1.17
PCDHGC3-201ENST00000308177 ZNF706Q9Y5V0 76 aaPredicted RBP7.77□□□□□ -1.17
PCDHGC3-201ENST00000308177 LINC00846Q9NV44 126 aa7.76□□□□□ -1.17
PCDHGC3-201ENST00000308177 CR1P17927 2039 aa7.75□□□□□ -1.17
PCDHGC3-201ENST00000308177 A0A087WVE0 104 aa7.75□□□□□ -1.17
PCDHGC3-201ENST00000308177 CCDC179H3BU77 68 aa7.75□□□□□ -1.17
PCDHGC3-201ENST00000308177 C22orf24Q9Y442 160 aa7.75□□□□□ -1.17
PCDHGC3-201ENST00000308177 COX7CP15954 63 aa7.75□□□□□ -1.17
PCDHGC3-201ENST00000308177 KRTAP10-11P60412 298 aa7.74□□□□□ -1.17
PCDHGC3-201ENST00000308177 EIF4EBP3O60516 100 aaPredicted RBP7.74□□□□□ -1.17
PCDHGC3-201ENST00000308177 LINC00588Q9Y4M8 146 aa7.74□□□□□ -1.17
PCDHGC3-201ENST00000308177 COL12A1Q99715 3063 aa7.74□□□□□ -1.17
PCDHGC3-201ENST00000308177 TEX15Q9BXT5 2789 aa7.74□□□□□ -1.17
PCDHGC3-201ENST00000308177 IGLV9-49A0A0B4J1Y8 123 aa7.74□□□□□ -1.17
PCDHGC3-201ENST00000308177 C5orf47Q569G3 176 aa7.72□□□□□ -1.17
PCDHGC3-201ENST00000308177 WFDC13Q8IUB5 93 aa7.72□□□□□ -1.17
PCDHGC3-201ENST00000308177 MDFIQ99750 246 aa7.72□□□□□ -1.17
PCDHGC3-201ENST00000308177 NDUFC1O43677 76 aa7.71□□□□□ -1.17
PCDHGC3-201ENST00000308177 HRCT1Q6UXD1 115 aa7.71□□□□□ -1.17
PCDHGC3-201ENST00000308177 MYO15AQ9UKN7 3530 aa7.71□□□□□ -1.18
PCDHGC3-201ENST00000308177 GVQW2A0A096LPI5 108 aaPredicted RBP7.71□□□□□ -1.18
PCDHGC3-201ENST00000308177 IGLV5-52A0A0A0MRZ9 124 aa7.71□□□□□ -1.18
PCDHGC3-201ENST00000308177 ATP5EP56381 51 aaPredicted RBP7.71□□□□□ -1.18
PCDHGC3-201ENST00000308177 LINC00167Q96N53 147 aa7.71□□□□□ -1.18
PCDHGC3-201ENST00000308177 PRLHP81277 87 aa7.7□□□□□ -1.18
PCDHGC3-201ENST00000308177 DNAH10OSP0CZ25 163 aa7.7□□□□□ -1.18
PCDHGC3-201ENST00000308177 C1orf134Q5TEV5 83 aa7.7□□□□□ -1.18
PCDHGC3-201ENST00000308177 Q6ZVQ6 151 aa7.7□□□□□ -1.18
PCDHGC3-201ENST00000308177 FAM236DA0A1B0GTK5 79 aa7.69□□□□□ -1.18
PCDHGC3-201ENST00000308177 FAM236CP0DP71 79 aa7.69□□□□□ -1.18
PCDHGC3-201ENST00000308177 SPINK6Q6UWN8 80 aa7.69□□□□□ -1.18
PCDHGC3-201ENST00000308177 PRR34Q9NV39 138 aa7.69□□□□□ -1.18
PCDHGC3-201ENST00000308177 DMXL1Q9Y485 3027 aa7.69□□□□□ -1.18
PCDHGC3-201ENST00000308177 IGKV4-1P06312 121 aa7.69□□□□□ -1.18
PCDHGC3-201ENST00000308177 KALRNO60229 2985 aa7.69□□□□□ -1.18
PCDHGC3-201ENST00000308177 Q9BRP9 147 aa7.69□□□□□ -1.18
PCDHGC3-201ENST00000308177 SNURFQ9Y675 71 aa7.69□□□□□ -1.18
PCDHGC3-201ENST00000308177 KIAA0087Q14695 138 aa7.68□□□□□ -1.18
PCDHGC3-201ENST00000308177 TRBV7-6A0A0J9YX20 115 aa7.68□□□□□ -1.18
PCDHGC3-201ENST00000308177 TRBV7-7A0A0K0K1E9 115 aa7.67□□□□□ -1.18
PCDHGC3-201ENST00000308177 K7EIL1 84 aa7.67□□□□□ -1.18
PCDHGC3-201ENST00000308177 ELOF1P60002 83 aaKnown RBP7.67□□□□□ -1.18
PCDHGC3-201ENST00000308177 COL6A5A8TX70 2615 aa7.67□□□□□ -1.18
PCDHGC3-201ENST00000308177 STAB1Q9NY15 2570 aa7.67□□□□□ -1.18
PCDHGC3-201ENST00000308177 SPATA3Q8NHX4 192 aa7.67□□□□□ -1.18
PCDHGC3-201ENST00000308177 GCN1Q92616 2671 aaKnown RBP7.66□□□□□ -1.18
PCDHGC3-201ENST00000308177 SMCR5Q8TEV8 140 aa7.66□□□□□ -1.18
PCDHGC3-201ENST00000308177 Q6ZRP5 223 aa7.66□□□□□ -1.18
PCDHGC3-201ENST00000308177 TRAV7A0A075B6U4 112 aa7.66□□□□□ -1.18
PCDHGC3-201ENST00000308177 A0A087WSZ3 146 aa7.66□□□□□ -1.18
PCDHGC3-201ENST00000308177 LINC01547P58512 204 aaPredicted RBP7.65□□□□□ -1.18
PCDHGC3-201ENST00000308177 LRBAP50851 2863 aa7.65□□□□□ -1.18
PCDHGC3-201ENST00000308177 ZZEF1O43149 2961 aa7.65□□□□□ -1.18
PCDHGC3-201ENST00000308177 VPREB1P12018 145 aa7.64□□□□□ -1.19
PCDHGC3-201ENST00000308177 UBR5O95071 2799 aaPredicted RBP7.64□□□□□ -1.19
PCDHGC3-201ENST00000308177 IGLV6-57P01721 117 aa7.64□□□□□ -1.19
PCDHGC3-201ENST00000308177 CHKB-CPT1BH3BT56 60 aa7.63□□□□□ -1.19
PCDHGC3-201ENST00000308177 NOTCH1P46531 2555 aa7.63□□□□□ -1.19
PCDHGC3-201ENST00000308177 NBDYA0A0U1RRE5 68 aa7.63□□□□□ -1.19
PCDHGC3-201ENST00000308177 FAM30AQ9NZY2 134 aa7.63□□□□□ -1.19
PCDHGC3-201ENST00000308177 TACC2O95359 2948 aa7.62□□□□□ -1.19
PCDHGC3-201ENST00000308177 Q6ZRX8 168 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms