RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 C6orf48Q9UBA6 75 aa4.57□□□□□ -1.68
PTCD2-201ENST00000308077 M0R2N4 97 aa4.57□□□□□ -1.68
PTCD2-201ENST00000308077 LECT2O14960 151 aa4.57□□□□□ -1.68
PTCD2-201ENST00000308077 IFITM1P13164 125 aa4.57□□□□□ -1.68
PTCD2-201ENST00000308077 RPL24P83731 157 aaKnown RBP4.57□□□□□ -1.68
PTCD2-201ENST00000308077 VAMP3Q15836 100 aa4.57□□□□□ -1.68
PTCD2-201ENST00000308077 Q6ZRU5 148 aa4.57□□□□□ -1.68
PTCD2-201ENST00000308077 C2orf48Q96LS8 159 aa4.57□□□□□ -1.68
PTCD2-201ENST00000308077 CAMK2N2Q96S95 79 aa4.57□□□□□ -1.68
PTCD2-201ENST00000308077 ALMS1Q8TCU4 4167 aa4.56□□□□□ -1.68
PTCD2-201ENST00000308077 SLPIP03973 132 aa4.56□□□□□ -1.68
PTCD2-201ENST00000308077 Q6ZRN7 208 aaPredicted RBP4.56□□□□□ -1.68
PTCD2-201ENST00000308077 A0A1W2PPM0 123 aa4.55□□□□□ -1.68
PTCD2-201ENST00000308077 UBE2V1Q13404 147 aa4.55□□□□□ -1.68
PTCD2-201ENST00000308077 COX17Q14061 63 aa4.55□□□□□ -1.68
PTCD2-201ENST00000308077 Q6ZR54 194 aa4.55□□□□□ -1.68
PTCD2-201ENST00000308077 DNAH6Q9C0G6 4158 aa4.55□□□□□ -1.68
PTCD2-201ENST00000308077 TRBV30A0A0K0K1B3 111 aa4.55□□□□□ -1.68
PTCD2-201ENST00000308077 LY6G6CO95867 125 aa4.55□□□□□ -1.68
PTCD2-201ENST00000308077 LINC00476Q8WZB0 136 aa4.55□□□□□ -1.68
PTCD2-201ENST00000308077 PSCAO43653 123 aa4.54□□□□□ -1.68
PTCD2-201ENST00000308077 TSPAN13O95857 204 aa4.54□□□□□ -1.68
PTCD2-201ENST00000308077 SYCNQ0VAF6 134 aa4.54□□□□□ -1.68
PTCD2-201ENST00000308077 PPDPFQ9H3Y8 114 aa4.54□□□□□ -1.68
PTCD2-201ENST00000308077 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.54□□□□□ -1.68
PTCD2-201ENST00000308077 A0A0B4J2C4 111 aa4.54□□□□□ -1.68
PTCD2-201ENST00000308077 F8WDY8 70 aa4.54□□□□□ -1.68
PTCD2-201ENST00000308077 SND1-IT1Q9HBX3 110 aa4.54□□□□□ -1.68
PTCD2-201ENST00000308077 DNAH2Q9P225 4427 aa4.53□□□□□ -1.68
PTCD2-201ENST00000308077 LOC107984156A0A0G2JMH3 177 aa4.53□□□□□ -1.68
PTCD2-201ENST00000308077 LRCOL1A6NCL2 159 aa4.53□□□□□ -1.68
PTCD2-201ENST00000308077 ARL17AQ8IVW1 177 aa4.53□□□□□ -1.68
PTCD2-201ENST00000308077 Q8NDZ9 215 aa4.53□□□□□ -1.68
PTCD2-201ENST00000308077 COPS9Q8WXC6 57 aa4.53□□□□□ -1.68
PTCD2-201ENST00000308077 CARD19Q96LW7 228 aa4.53□□□□□ -1.68
PTCD2-201ENST00000308077 IGKV2-28A0A075B6P5 120 aa4.53□□□□□ -1.68
PTCD2-201ENST00000308077 K7EP34 96 aa4.53□□□□□ -1.68
PTCD2-201ENST00000308077 IGKV2D-28P01615 120 aa4.53□□□□□ -1.68
PTCD2-201ENST00000308077 H7C2G1 150 aa4.52□□□□□ -1.69
PTCD2-201ENST00000308077 PRO1854Q9UHT4 67 aa4.52□□□□□ -1.69
PTCD2-201ENST00000308077 SPCS1Q9Y6A9 102 aa4.52□□□□□ -1.69
PTCD2-201ENST00000308077 GAGE10A6NGK3 116 aa4.51□□□□□ -1.69
PTCD2-201ENST00000308077 NDUFC2-KCTD14E9PQ53 114 aa4.51□□□□□ -1.69
PTCD2-201ENST00000308077 LCE2BO14633 110 aa4.51□□□□□ -1.69
PTCD2-201ENST00000308077 RNF151Q2KHN1 245 aa4.51□□□□□ -1.69
PTCD2-201ENST00000308077 Q6ZRP5 223 aa4.51□□□□□ -1.69
PTCD2-201ENST00000308077 LINC00337Q8N6G1 96 aa4.51□□□□□ -1.69
PTCD2-201ENST00000308077 XAGE1AQ9HD64 81 aa4.51□□□□□ -1.69
PTCD2-201ENST00000308077 FABP2P12104 132 aa4.51□□□□□ -1.69
PTCD2-201ENST00000308077 RPL13AP40429 203 aaKnown RBP4.5□□□□□ -1.69
PTCD2-201ENST00000308077 PRR3P79522 188 aaKnown RBP4.5□□□□□ -1.69
PTCD2-201ENST00000308077 GAGE2EQ4V326 116 aa4.5□□□□□ -1.69
PTCD2-201ENST00000308077 MTURNQ8N3F0 131 aa4.5□□□□□ -1.69
PTCD2-201ENST00000308077 GAGE2DQ9UEU5 116 aa4.5□□□□□ -1.69
PTCD2-201ENST00000308077 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.5□□□□□ -1.69
PTCD2-201ENST00000308077 TLX1NBP0CAT3 122 aa4.5□□□□□ -1.69
PTCD2-201ENST00000308077 CNBPP62633 177 aaKnown RBP4.5□□□□□ -1.69
PTCD2-201ENST00000308077 C9orf129Q5T035 196 aaKnown RBP4.5□□□□□ -1.69
PTCD2-201ENST00000308077 NDUFC2O95298 119 aa4.49□□□□□ -1.69
PTCD2-201ENST00000308077 RPL18AQ02543 176 aaKnown RBP4.49□□□□□ -1.69
PTCD2-201ENST00000308077 C14orf177Q52M58 125 aa4.49□□□□□ -1.69
PTCD2-201ENST00000308077 C1orf134Q5TEV5 83 aa4.49□□□□□ -1.69
PTCD2-201ENST00000308077 FRAS1Q86XX4 4008 aa4.49□□□□□ -1.69
PTCD2-201ENST00000308077 A0A087WTM6 91 aa4.48□□□□□ -1.69
PTCD2-201ENST00000308077 H3BMG7 143 aa4.48□□□□□ -1.69
PTCD2-201ENST00000308077 NCR3O14931 201 aa4.48□□□□□ -1.69
PTCD2-201ENST00000308077 Q8N814 137 aa4.48□□□□□ -1.69
PTCD2-201ENST00000308077 DNAH17Q9UFH2 4485 aa4.48□□□□□ -1.69
PTCD2-201ENST00000308077 TRAV13-2A0A0B4J235 113 aa4.48□□□□□ -1.69
PTCD2-201ENST00000308077 TRIAP1O43715 76 aa4.48□□□□□ -1.69
PTCD2-201ENST00000308077 TCL1BO95988 128 aa4.48□□□□□ -1.69
PTCD2-201ENST00000308077 Q1RN00 199 aa4.48□□□□□ -1.69
PTCD2-201ENST00000308077 GTF2H5Q6ZYL4 71 aa4.48□□□□□ -1.69
PTCD2-201ENST00000308077 PRO0461Q9UI25 63 aa4.48□□□□□ -1.69
PTCD2-201ENST00000308077 LOC107984640A0A0U1RRK4 108 aa4.47□□□□□ -1.69
PTCD2-201ENST00000308077 VPREB1P12018 145 aa4.47□□□□□ -1.69
PTCD2-201ENST00000308077 PSMB2P49721 201 aa4.47□□□□□ -1.69
PTCD2-201ENST00000308077 SERTAD4-AS1Q5TG53 156 aa4.47□□□□□ -1.69
PTCD2-201ENST00000308077 GAGE2BQ13066 116 aa4.47□□□□□ -1.69
PTCD2-201ENST00000308077 A0A096LNI7 61 aa4.46□□□□□ -1.7
PTCD2-201ENST00000308077 RTL8CO15255 209 aa4.46□□□□□ -1.7
PTCD2-201ENST00000308077 FUSP35637 526 aaKnown RBP eCLIP4.46□□□□□ -1.7
PTCD2-201ENST00000308077 LINC01620Q4KN68 170 aa4.46□□□□□ -1.7
PTCD2-201ENST00000308077 OR13C6PQ8NH95 151 aa4.46□□□□□ -1.7
PTCD2-201ENST00000308077 FAM168BA1KXE4 195 aa4.46□□□□□ -1.7
PTCD2-201ENST00000308077 FAM229AH3BQW9 127 aa4.46□□□□□ -1.7
PTCD2-201ENST00000308077 KRTAP7-1Q8IUC3 87 aa4.46□□□□□ -1.7
PTCD2-201ENST00000308077 C9orf163Q8N9P6 203 aa4.46□□□□□ -1.7
PTCD2-201ENST00000308077 SMIM11BQ8TCY0 68 aa4.46□□□□□ -1.7
PTCD2-201ENST00000308077 CLEC2BQ92478 149 aa4.46□□□□□ -1.7
PTCD2-201ENST00000308077 TRBV10-2A0A0K0K1G8 114 aa4.45□□□□□ -1.7
PTCD2-201ENST00000308077 H3BS24 57 aa4.45□□□□□ -1.7
PTCD2-201ENST00000308077 C16orf90A8MZG2 172 aa4.44□□□□□ -1.7
PTCD2-201ENST00000308077 IGLV6-57P01721 117 aa4.44□□□□□ -1.7
PTCD2-201ENST00000308077 SCGB1C2P0DMR2 95 aa4.44□□□□□ -1.7
PTCD2-201ENST00000308077 RPL28P46779 137 aaKnown RBP4.44□□□□□ -1.7
PTCD2-201ENST00000308077 PLA2G2DQ9UNK4 145 aa4.44□□□□□ -1.7
PTCD2-201ENST00000308077 IGKV2-24A0A0C4DH68 120 aa4.44□□□□□ -1.7
PTCD2-201ENST00000308077 TRBV10-3A0A0K0K1G6 114 aa4.44□□□□□ -1.7
PTCD2-201ENST00000308077 CHTF8P0CG12 524 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms