RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 RMI2Q96E14 147 aa7.86□□□□□ -1.15
TRIM40-205ENST00000307859 RYR1P21817 5038 aa7.86□□□□□ -1.15
TRIM40-205ENST00000307859 COX6CP09669 75 aa7.85□□□□□ -1.15
TRIM40-205ENST00000307859 CAMK2N2Q96S95 79 aa7.85□□□□□ -1.15
TRIM40-205ENST00000307859 RPL28P46779 137 aaKnown RBP7.83□□□□□ -1.16
TRIM40-205ENST00000307859 ATXN8Q156A1 80 aa7.83□□□□□ -1.16
TRIM40-205ENST00000307859 Q6ZRU5 148 aa7.83□□□□□ -1.16
TRIM40-205ENST00000307859 UBE2DNLQ8IWF7 75 aa7.83□□□□□ -1.16
TRIM40-205ENST00000307859 PLECQ15149 4684 aaKnown RBP7.82□□□□□ -1.16
TRIM40-205ENST00000307859 WFDC2Q14508 124 aa7.82□□□□□ -1.16
TRIM40-205ENST00000307859 MTURNQ8N3F0 131 aa7.82□□□□□ -1.16
TRIM40-205ENST00000307859 SMCPP49901 116 aaPredicted RBP7.81□□□□□ -1.16
TRIM40-205ENST00000307859 KRTAP1-5Q9BYS1 174 aa7.81□□□□□ -1.16
TRIM40-205ENST00000307859 STARD9Q9P2P6 4700 aa7.81□□□□□ -1.16
TRIM40-205ENST00000307859 USP17L23D6RBM5 183 aa7.81□□□□□ -1.16
TRIM40-205ENST00000307859 LST1O00453 97 aa7.81□□□□□ -1.16
TRIM40-205ENST00000307859 Q8NDZ9 215 aa7.81□□□□□ -1.16
TRIM40-205ENST00000307859 CLEC2BQ92478 149 aa7.81□□□□□ -1.16
TRIM40-205ENST00000307859 SYCNQ0VAF6 134 aa7.8□□□□□ -1.16
TRIM40-205ENST00000307859 LINC01620Q4KN68 170 aa7.8□□□□□ -1.16
TRIM40-205ENST00000307859 SMIM11BQ8TCY0 68 aa7.8□□□□□ -1.16
TRIM40-205ENST00000307859 CSMD3Q7Z407 3707 aa7.8□□□□□ -1.16
TRIM40-205ENST00000307859 NDUFC2-KCTD14E9PQ53 114 aa7.79□□□□□ -1.16
TRIM40-205ENST00000307859 OCIAD2Q56VL3 154 aa7.79□□□□□ -1.16
TRIM40-205ENST00000307859 LINC01600Q96MT4 127 aa7.79□□□□□ -1.16
TRIM40-205ENST00000307859 VPS13DQ5THJ4 4388 aa7.79□□□□□ -1.16
TRIM40-205ENST00000307859 C9JAW5 83 aa7.78□□□□□ -1.16
TRIM40-205ENST00000307859 M0QXV9 152 aa7.78□□□□□ -1.16
TRIM40-205ENST00000307859 PRR3P79522 188 aaKnown RBP7.78□□□□□ -1.16
TRIM40-205ENST00000307859 RNF151Q2KHN1 245 aa7.78□□□□□ -1.16
TRIM40-205ENST00000307859 OR13C6PQ8NH95 151 aa7.78□□□□□ -1.16
TRIM40-205ENST00000307859 SLC25A20O43772 301 aa7.78□□□□□ -1.16
TRIM40-205ENST00000307859 TRBV10-2A0A0K0K1G8 114 aa7.77□□□□□ -1.17
TRIM40-205ENST00000307859 NCR3O14931 201 aa7.77□□□□□ -1.17
TRIM40-205ENST00000307859 ETDBQ3ZM63 59 aa7.77□□□□□ -1.17
TRIM40-205ENST00000307859 CARD19Q96LW7 228 aa7.77□□□□□ -1.17
TRIM40-205ENST00000307859 TMEM126AQ9H061 195 aa7.77□□□□□ -1.17
TRIM40-205ENST00000307859 SLPIP03973 132 aa7.76□□□□□ -1.17
TRIM40-205ENST00000307859 TLX1NBP0CAT3 122 aa7.76□□□□□ -1.17
TRIM40-205ENST00000307859 XAGE1AQ9HD64 81 aa7.76□□□□□ -1.17
TRIM40-205ENST00000307859 TRACP01848 142 aa7.75□□□□□ -1.17
TRIM40-205ENST00000307859 PCP4P48539 62 aa7.75□□□□□ -1.17
TRIM40-205ENST00000307859 TTC32Q5I0X7 151 aa7.75□□□□□ -1.17
TRIM40-205ENST00000307859 Q6ZRP5 223 aa7.75□□□□□ -1.17
TRIM40-205ENST00000307859 H0YGX0 51 aa7.74□□□□□ -1.17
TRIM40-205ENST00000307859 FAM218AQ96MZ4 157 aa7.74□□□□□ -1.17
TRIM40-205ENST00000307859 NBDYA0A0U1RRE5 68 aa7.74□□□□□ -1.17
TRIM40-205ENST00000307859 H3BT86 120 aa7.74□□□□□ -1.17
TRIM40-205ENST00000307859 K7ERU9 68 aa7.74□□□□□ -1.17
TRIM40-205ENST00000307859 IGLV6-57P01721 117 aa7.74□□□□□ -1.17
TRIM40-205ENST00000307859 VPREB1P12018 145 aa7.74□□□□□ -1.17
TRIM40-205ENST00000307859 TEN1Q86WV5 123 aa7.74□□□□□ -1.17
TRIM40-205ENST00000307859 ANKRD29Q8N6D5 301 aa7.74□□□□□ -1.17
TRIM40-205ENST00000307859 DNAH10Q8IVF4 4471 aa7.73□□□□□ -1.17
TRIM40-205ENST00000307859 LECT2O14960 151 aa7.73□□□□□ -1.17
TRIM40-205ENST00000307859 RPL18AQ02543 176 aaKnown RBP7.73□□□□□ -1.17
TRIM40-205ENST00000307859 S100A7L2Q5SY68 101 aa7.73□□□□□ -1.17
TRIM40-205ENST00000307859 KIAA1109Q2LD37 5005 aa7.72□□□□□ -1.17
TRIM40-205ENST00000307859 GAGE2EQ4V326 116 aa7.72□□□□□ -1.17
TRIM40-205ENST00000307859 GAGE2DQ9UEU5 116 aa7.72□□□□□ -1.17
TRIM40-205ENST00000307859 C9orf129Q5T035 196 aaKnown RBP7.71□□□□□ -1.17
TRIM40-205ENST00000307859 ALMS1Q8TCU4 4167 aa7.71□□□□□ -1.18
TRIM40-205ENST00000307859 PSCAO43653 123 aa7.7□□□□□ -1.18
TRIM40-205ENST00000307859 LINC00476Q8WZB0 136 aa7.7□□□□□ -1.18
TRIM40-205ENST00000307859 A0A087WYN8 130 aa7.7□□□□□ -1.18
TRIM40-205ENST00000307859 PPDPFLQ8WWR9 84 aa7.7□□□□□ -1.18
TRIM40-205ENST00000307859 PLA2G2DQ9UNK4 145 aa7.7□□□□□ -1.18
TRIM40-205ENST00000307859 M0R378 163 aa7.69□□□□□ -1.18
TRIM40-205ENST00000307859 CNBPP62633 177 aaKnown RBP7.69□□□□□ -1.18
TRIM40-205ENST00000307859 C6orf99Q4VX62 202 aa7.69□□□□□ -1.18
TRIM40-205ENST00000307859 C14orf177Q52M58 125 aa7.69□□□□□ -1.18
TRIM40-205ENST00000307859 Q6ZRN7 208 aaPredicted RBP7.69□□□□□ -1.18
TRIM40-205ENST00000307859 TRBV10-3A0A0K0K1G6 114 aa7.68□□□□□ -1.18
TRIM40-205ENST00000307859 A0A1B0GX51 115 aa7.68□□□□□ -1.18
TRIM40-205ENST00000307859 FRAS1Q86XX4 4008 aa7.68□□□□□ -1.18
TRIM40-205ENST00000307859 LOC107984640A0A0U1RRK4 108 aa7.67□□□□□ -1.18
TRIM40-205ENST00000307859 J3QR89 54 aa7.67□□□□□ -1.18
TRIM40-205ENST00000307859 C21orf62-AS1Q17RA5 79 aa7.67□□□□□ -1.18
TRIM40-205ENST00000307859 TRAV23DV6A0A075B6W5 121 aa7.67□□□□□ -1.18
TRIM40-205ENST00000307859 LRCOL1A6NCL2 159 aa7.67□□□□□ -1.18
TRIM40-205ENST00000307859 IGLV5-37A0A075B6J1 123 aa7.66□□□□□ -1.18
TRIM40-205ENST00000307859 DNAL4O96015 105 aa7.66□□□□□ -1.18
TRIM40-205ENST00000307859 SERTAD4-AS1Q5TG53 156 aa7.66□□□□□ -1.18
TRIM40-205ENST00000307859 LINC00167Q96N53 147 aa7.66□□□□□ -1.18
TRIM40-205ENST00000307859 BAALC-AS2P0C853 105 aa7.64□□□□□ -1.19
TRIM40-205ENST00000307859 DIRC1Q969H9 104 aa7.64□□□□□ -1.19
TRIM40-205ENST00000307859 VPS25Q9BRG1 176 aa7.64□□□□□ -1.19
TRIM40-205ENST00000307859 C22orf24Q9Y442 160 aa7.64□□□□□ -1.19
TRIM40-205ENST00000307859 LY6G6CO95867 125 aa7.63□□□□□ -1.19
TRIM40-205ENST00000307859 GAGE2BQ13066 116 aa7.63□□□□□ -1.19
TRIM40-205ENST00000307859 LINC00575Q6W349 94 aa7.63□□□□□ -1.19
TRIM40-205ENST00000307859 Q6ZR54 194 aa7.63□□□□□ -1.19
TRIM40-205ENST00000307859 Q8N814 137 aa7.63□□□□□ -1.19
TRIM40-205ENST00000307859 NKAPP1Q8N9T2 125 aa7.63□□□□□ -1.19
TRIM40-205ENST00000307859 DNAH6Q9C0G6 4158 aa7.63□□□□□ -1.19
TRIM40-205ENST00000307859 TRBV7-6A0A0J9YX20 115 aa7.63□□□□□ -1.19
TRIM40-205ENST00000307859 TEX49A0A1B0GTD5 131 aa7.63□□□□□ -1.19
TRIM40-205ENST00000307859 ZNF73O43830 326 aaPredicted RBP7.63□□□□□ -1.19
TRIM40-205ENST00000307859 KRTAP7-1Q8IUC3 87 aa7.63□□□□□ -1.19
TRIM40-205ENST00000307859 C7orf33Q8WU49 177 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms