RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 APLNQ9ULZ1 77 aa9.66□□□□□ -0.86
SHCBP1-201ENST00000303383 IGKV2-28A0A075B6P5 120 aa9.66□□□□□ -0.86
SHCBP1-201ENST00000303383 C9JAW5 83 aa9.66□□□□□ -0.86
SHCBP1-201ENST00000303383 IGKV2D-28P01615 120 aa9.66□□□□□ -0.86
SHCBP1-201ENST00000303383 C6orf48Q9UBA6 75 aa9.66□□□□□ -0.86
SHCBP1-201ENST00000303383 C2orf48Q96LS8 159 aa9.65□□□□□ -0.86
SHCBP1-201ENST00000303383 CLEC2BQ92478 149 aa9.65□□□□□ -0.86
SHCBP1-201ENST00000303383 COL7A1Q02388 2944 aa9.65□□□□□ -0.86
SHCBP1-201ENST00000303383 GVQW2A0A096LPI5 108 aaPredicted RBP9.65□□□□□ -0.87
SHCBP1-201ENST00000303383 Q6ZRU5 148 aa9.64□□□□□ -0.87
SHCBP1-201ENST00000303383 SYCNQ0VAF6 134 aa9.63□□□□□ -0.87
SHCBP1-201ENST00000303383 J3KT08 172 aa9.63□□□□□ -0.87
SHCBP1-201ENST00000303383 PSCAO43653 123 aa9.63□□□□□ -0.87
SHCBP1-201ENST00000303383 S100A7L2Q5SY68 101 aa9.63□□□□□ -0.87
SHCBP1-201ENST00000303383 NDUFC2O95298 119 aa9.62□□□□□ -0.87
SHCBP1-201ENST00000303383 LINC01620Q4KN68 170 aa9.62□□□□□ -0.87
SHCBP1-201ENST00000303383 TTC32Q5I0X7 151 aa9.62□□□□□ -0.87
SHCBP1-201ENST00000303383 NCR3O14931 201 aa9.62□□□□□ -0.87
SHCBP1-201ENST00000303383 PRR3P79522 188 aaKnown RBP9.62□□□□□ -0.87
SHCBP1-201ENST00000303383 XAGE1AQ9HD64 81 aa9.62□□□□□ -0.87
SHCBP1-201ENST00000303383 USP17L23D6RBM5 183 aa9.62□□□□□ -0.87
SHCBP1-201ENST00000303383 SLC25A20O43772 301 aa9.61□□□□□ -0.87
SHCBP1-201ENST00000303383 V9GYY9 64 aa9.61□□□□□ -0.87
SHCBP1-201ENST00000303383 SMIM11BQ8TCY0 68 aa9.61□□□□□ -0.87
SHCBP1-201ENST00000303383 GAGE2EQ4V326 116 aa9.61□□□□□ -0.87
SHCBP1-201ENST00000303383 GAGE2DQ9UEU5 116 aa9.61□□□□□ -0.87
SHCBP1-201ENST00000303383 LECT2O14960 151 aa9.6□□□□□ -0.87
SHCBP1-201ENST00000303383 RPL28P46779 137 aaKnown RBP9.6□□□□□ -0.87
SHCBP1-201ENST00000303383 PRO0461Q9UI25 63 aa9.6□□□□□ -0.87
SHCBP1-201ENST00000303383 DNAH9Q9NYC9 4486 aa9.6□□□□□ -0.87
SHCBP1-201ENST00000303383 CARD19Q96LW7 228 aa9.59□□□□□ -0.87
SHCBP1-201ENST00000303383 LST1O00453 97 aa9.59□□□□□ -0.87
SHCBP1-201ENST00000303383 GAGE2BQ13066 116 aa9.59□□□□□ -0.87
SHCBP1-201ENST00000303383 KRTAP21-3Q3LHN1 58 aa9.59□□□□□ -0.87
SHCBP1-201ENST00000303383 NDUFC2-KCTD14E9PQ53 114 aa9.58□□□□□ -0.88
SHCBP1-201ENST00000303383 HRCT1Q6UXD1 115 aa9.58□□□□□ -0.88
SHCBP1-201ENST00000303383 CASC10Q5T4H9 136 aa9.58□□□□□ -0.88
SHCBP1-201ENST00000303383 PKIGQ9Y2B9 76 aa9.58□□□□□ -0.88
SHCBP1-201ENST00000303383 RPL18AQ02543 176 aaKnown RBP9.57□□□□□ -0.88
SHCBP1-201ENST00000303383 C4orf26Q17RF5 130 aa9.57□□□□□ -0.88
SHCBP1-201ENST00000303383 TRBV10-2A0A0K0K1G8 114 aa9.56□□□□□ -0.88
SHCBP1-201ENST00000303383 H0YGX0 51 aa9.56□□□□□ -0.88
SHCBP1-201ENST00000303383 DNAL4O96015 105 aa9.56□□□□□ -0.88
SHCBP1-201ENST00000303383 ANKRD29Q8N6D5 301 aa9.56□□□□□ -0.88
SHCBP1-201ENST00000303383 SMCPP49901 116 aaPredicted RBP9.56□□□□□ -0.88
SHCBP1-201ENST00000303383 KRTAP1-5Q9BYS1 174 aa9.54□□□□□ -0.88
SHCBP1-201ENST00000303383 TEN1Q86WV5 123 aa9.54□□□□□ -0.88
SHCBP1-201ENST00000303383 SNCGO76070 127 aa9.52□□□□□ -0.88
SHCBP1-201ENST00000303383 A0A1B0GX51 115 aa9.52□□□□□ -0.89
SHCBP1-201ENST00000303383 TRACP01848 142 aa9.52□□□□□ -0.89
SHCBP1-201ENST00000303383 Q6ZRP5 223 aa9.52□□□□□ -0.89
SHCBP1-201ENST00000303383 Q8NDZ9 215 aa9.52□□□□□ -0.89
SHCBP1-201ENST00000303383 H3BT86 120 aa9.52□□□□□ -0.89
SHCBP1-201ENST00000303383 PRO0628Q9UI54 55 aa9.52□□□□□ -0.89
SHCBP1-201ENST00000303383 MEGF8Q7Z7M0 2845 aa9.51□□□□□ -0.89
SHCBP1-201ENST00000303383 NBDYA0A0U1RRE5 68 aa9.51□□□□□ -0.89
SHCBP1-201ENST00000303383 NKAPP1Q8N9T2 125 aa9.5□□□□□ -0.89
SHCBP1-201ENST00000303383 PPDPFLQ8WWR9 84 aa9.5□□□□□ -0.89
SHCBP1-201ENST00000303383 FAM218AQ96MZ4 157 aa9.5□□□□□ -0.89
SHCBP1-201ENST00000303383 C6orf99Q4VX62 202 aa9.5□□□□□ -0.89
SHCBP1-201ENST00000303383 DNHD1Q96M86 4753 aa9.49□□□□□ -0.89
SHCBP1-201ENST00000303383 C14orf177Q52M58 125 aa9.49□□□□□ -0.89
SHCBP1-201ENST00000303383 TENM2Q9NT68 2774 aa9.49□□□□□ -0.89
SHCBP1-201ENST00000303383 M0R2N4 97 aa9.48□□□□□ -0.89
SHCBP1-201ENST00000303383 A0A087WYN8 130 aa9.48□□□□□ -0.89
SHCBP1-201ENST00000303383 TRBV10-3A0A0K0K1G6 114 aa9.48□□□□□ -0.89
SHCBP1-201ENST00000303383 M0R378 163 aa9.48□□□□□ -0.89
SHCBP1-201ENST00000303383 SLPIP03973 132 aa9.48□□□□□ -0.89
SHCBP1-201ENST00000303383 BAALC-AS2P0C853 105 aa9.48□□□□□ -0.89
SHCBP1-201ENST00000303383 RPS28P62857 69 aaKnown RBP9.48□□□□□ -0.89
SHCBP1-201ENST00000303383 VPREB1P12018 145 aa9.47□□□□□ -0.89
SHCBP1-201ENST00000303383 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.46□□□□□ -0.89
SHCBP1-201ENST00000303383 TRAV23DV6A0A075B6W5 121 aa9.46□□□□□ -0.89
SHCBP1-201ENST00000303383 FAM236AA0A1B0GUQ0 79 aa9.46□□□□□ -0.89
SHCBP1-201ENST00000303383 FAM236BA0A1B0GV22 79 aa9.46□□□□□ -0.89
SHCBP1-201ENST00000303383 IGLV6-57P01721 117 aa9.46□□□□□ -0.9
SHCBP1-201ENST00000303383 TLX1NBP0CAT3 122 aa9.46□□□□□ -0.9
SHCBP1-201ENST00000303383 DIRC1Q969H9 104 aa9.45□□□□□ -0.9
SHCBP1-201ENST00000303383 C9orf129Q5T035 196 aaKnown RBP9.45□□□□□ -0.9
SHCBP1-201ENST00000303383 PRKDCP78527 4128 aaKnown RBP9.45□□□□□ -0.9
SHCBP1-201ENST00000303383 Q6Q795 121 aa9.44□□□□□ -0.9
SHCBP1-201ENST00000303383 TEX49A0A1B0GTD5 131 aa9.44□□□□□ -0.9
SHCBP1-201ENST00000303383 Q5XG85 94 aa9.43□□□□□ -0.9
SHCBP1-201ENST00000303383 C9orf153Q5TBE3 101 aa9.43□□□□□ -0.9
SHCBP1-201ENST00000303383 ORMDL1Q9P0S3 153 aa9.42□□□□□ -0.9
SHCBP1-201ENST00000303383 ZNF73O43830 326 aaPredicted RBP9.42□□□□□ -0.9
SHCBP1-201ENST00000303383 FAM236DA0A1B0GTK5 79 aa9.41□□□□□ -0.9
SHCBP1-201ENST00000303383 FAM236CP0DP71 79 aa9.41□□□□□ -0.9
SHCBP1-201ENST00000303383 IGKV2-24A0A0C4DH68 120 aa9.4□□□□□ -0.9
SHCBP1-201ENST00000303383 Q8N814 137 aa9.4□□□□□ -0.9
SHCBP1-201ENST00000303383 SERTAD4-AS1Q5TG53 156 aa9.4□□□□□ -0.9
SHCBP1-201ENST00000303383 LINC00336Q6ZUF6 198 aa9.4□□□□□ -0.9
SHCBP1-201ENST00000303383 LINC01600Q96MT4 127 aa9.4□□□□□ -0.9
SHCBP1-201ENST00000303383 COX7BP24311 80 aa9.39□□□□□ -0.91
SHCBP1-201ENST00000303383 hADV29S1A0JD25 119 aa9.39□□□□□ -0.91
SHCBP1-201ENST00000303383 LY6G6CO95867 125 aa9.39□□□□□ -0.91
SHCBP1-201ENST00000303383 CNBPP62633 177 aaKnown RBP9.39□□□□□ -0.91
SHCBP1-201ENST00000303383 C1orf195Q5TG92 126 aa9.39□□□□□ -0.91
SHCBP1-201ENST00000303383 WWC2-AS2Q96NR7 200 aa9.39□□□□□ -0.91
SHCBP1-201ENST00000303383 LINC00575Q6W349 94 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms