RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 ATP11AUNQ6ZP68 121 aa8.62□□□□□ -1.03
ABCA3-201ENST00000301732 IGLV1-51P01701 117 aa8.6□□□□□ -1.03
ABCA3-201ENST00000301732 PHF5AQ7RTV0 110 aaKnown RBP8.6□□□□□ -1.03
ABCA3-201ENST00000301732 SSBP3-AS1Q7Z2R9 100 aa8.6□□□□□ -1.03
ABCA3-201ENST00000301732 CPAMD8Q8IZJ3 1885 aa8.59□□□□□ -1.03
ABCA3-201ENST00000301732 LTBP2Q14767 1821 aa8.59□□□□□ -1.03
ABCA3-201ENST00000301732 NHLRC4P0CG21 123 aaPredicted RBP8.58□□□□□ -1.04
ABCA3-201ENST00000301732 hDV103S1A0JD37 113 aa8.58□□□□□ -1.04
ABCA3-201ENST00000301732 C6orf48Q9UBA6 75 aa8.58□□□□□ -1.04
ABCA3-201ENST00000301732 A0A0G2JQZ4 141 aa8.57□□□□□ -1.04
ABCA3-201ENST00000301732 A0A1W2PNN7 141 aa8.57□□□□□ -1.04
ABCA3-201ENST00000301732 LINC00167Q96N53 147 aa8.57□□□□□ -1.04
ABCA3-201ENST00000301732 USP9YO00507 2555 aaPredicted RBP8.57□□□□□ -1.04
ABCA3-201ENST00000301732 MDFIQ99750 246 aa8.55□□□□□ -1.04
ABCA3-201ENST00000301732 C1orf134Q5TEV5 83 aa8.55□□□□□ -1.04
ABCA3-201ENST00000301732 SPTBN4Q9H254 2564 aa8.55□□□□□ -1.04
ABCA3-201ENST00000301732 FAM19A4Q96LR4 140 aa8.54□□□□□ -1.04
ABCA3-201ENST00000301732 A8MUN3 132 aa8.54□□□□□ -1.04
ABCA3-201ENST00000301732 PRO3102Q9H379 93 aa8.54□□□□□ -1.04
ABCA3-201ENST00000301732 CXCL6P80162 114 aa8.53□□□□□ -1.04
ABCA3-201ENST00000301732 FAM168BA1KXE4 195 aa8.53□□□□□ -1.04
ABCA3-201ENST00000301732 LIMD2Q9BT23 127 aa8.53□□□□□ -1.04
ABCA3-201ENST00000301732 MTORP42345 2549 aa8.52□□□□□ -1.05
ABCA3-201ENST00000301732 CEP295Q9C0D2 2601 aa8.52□□□□□ -1.05
ABCA3-201ENST00000301732 PRO0461Q9UI25 63 aa8.51□□□□□ -1.05
ABCA3-201ENST00000301732 LINC00476Q8WZB0 136 aa8.51□□□□□ -1.05
ABCA3-201ENST00000301732 KIF25-AS1Q9Y6Z4 181 aa8.51□□□□□ -1.05
ABCA3-201ENST00000301732 CHD8Q9HCK8 2581 aa8.51□□□□□ -1.05
ABCA3-201ENST00000301732 POLQO75417 2590 aa8.5□□□□□ -1.05
ABCA3-201ENST00000301732 ACYP2P14621 99 aa8.5□□□□□ -1.05
ABCA3-201ENST00000301732 ACANP16112 2415 aa8.5□□□□□ -1.05
ABCA3-201ENST00000301732 ANKRD11Q6UB99 2663 aaPredicted RBP8.5□□□□□ -1.05
ABCA3-201ENST00000301732 LINC01561Q8N1V8 128 aa8.49□□□□□ -1.05
ABCA3-201ENST00000301732 PCNTO95613 3336 aa8.49□□□□□ -1.05
ABCA3-201ENST00000301732 A0A1B0GUV1 79 aa8.49□□□□□ -1.05
ABCA3-201ENST00000301732 C11orf72Q8NBR9 251 aa8.49□□□□□ -1.05
ABCA3-201ENST00000301732 IGHV3OR16-9A0A0B4J2B5 98 aa8.48□□□□□ -1.05
ABCA3-201ENST00000301732 Q6ZQT0 140 aa8.48□□□□□ -1.05
ABCA3-201ENST00000301732 APLNQ9ULZ1 77 aa8.47□□□□□ -1.05
ABCA3-201ENST00000301732 Q96NJ1 140 aa8.47□□□□□ -1.05
ABCA3-201ENST00000301732 DNAH12Q6ZR08 3092 aa8.46□□□□□ -1.05
ABCA3-201ENST00000301732 K7EQZ3 153 aa8.46□□□□□ -1.06
ABCA3-201ENST00000301732 IGLV5-39A0A0G2JS06 123 aa8.45□□□□□ -1.06
ABCA3-201ENST00000301732 LINC00315P59091 139 aa8.45□□□□□ -1.06
ABCA3-201ENST00000301732 C8orf87E5RJ46 101 aa8.45□□□□□ -1.06
ABCA3-201ENST00000301732 EPM2AB3EWF7 344 aa8.45□□□□□ -1.06
ABCA3-201ENST00000301732 FHL3Q13643 280 aa8.44□□□□□ -1.06
ABCA3-201ENST00000301732 LINC00313P59037 77 aa8.43□□□□□ -1.06
ABCA3-201ENST00000301732 TRBV7-4A0A0J9YYF1 115 aa8.43□□□□□ -1.06
ABCA3-201ENST00000301732 EIF4EBP3O60516 100 aaPredicted RBP8.43□□□□□ -1.06
ABCA3-201ENST00000301732 LINC01600Q96MT4 127 aa8.43□□□□□ -1.06
ABCA3-201ENST00000301732 IGLV6-57P01721 117 aa8.41□□□□□ -1.06
ABCA3-201ENST00000301732 FASNP49327 2511 aaKnown RBP8.41□□□□□ -1.06
ABCA3-201ENST00000301732 ELOF1P60002 83 aaKnown RBP8.41□□□□□ -1.06
ABCA3-201ENST00000301732 TRAV22A0A0B4J277 110 aa8.4□□□□□ -1.06
ABCA3-201ENST00000301732 COX8CQ7Z4L0 72 aa8.4□□□□□ -1.06
ABCA3-201ENST00000301732 COA5Q86WW8 74 aa8.4□□□□□ -1.06
ABCA3-201ENST00000301732 PRRC2CQ9Y520 2896 aaKnown RBP8.4□□□□□ -1.07
ABCA3-201ENST00000301732 C9orf92A6NGG3 77 aa8.4□□□□□ -1.07
ABCA3-201ENST00000301732 ANAPC11Q9NYG5 84 aa8.4□□□□□ -1.07
ABCA3-201ENST00000301732 Q6ZRP5 223 aa8.39□□□□□ -1.07
ABCA3-201ENST00000301732 DSCR10P59022 87 aa8.37□□□□□ -1.07
ABCA3-201ENST00000301732 LINC00336Q6ZUF6 198 aa8.37□□□□□ -1.07
ABCA3-201ENST00000301732 A0A0D9SG42 100 aa8.37□□□□□ -1.07
ABCA3-201ENST00000301732 TYMSOSQ8TAI1 123 aa8.37□□□□□ -1.07
ABCA3-201ENST00000301732 Q6ZRX8 168 aa8.37□□□□□ -1.07
ABCA3-201ENST00000301732 CEP350Q5VT06 3117 aa8.36□□□□□ -1.07
ABCA3-201ENST00000301732 MUC22E2RYF6 1773 aaPredicted RBP8.36□□□□□ -1.07
ABCA3-201ENST00000301732 LINC01554Q52M75 96 aa8.36□□□□□ -1.07
ABCA3-201ENST00000301732 Q8NBF4 154 aa8.36□□□□□ -1.07
ABCA3-201ENST00000301732 USP24Q9UPU5 2620 aa8.35□□□□□ -1.07
ABCA3-201ENST00000301732 RTL8CO15255 209 aa8.34□□□□□ -1.07
ABCA3-201ENST00000301732 COL27A1Q8IZC6 1860 aaPredicted RBP8.34□□□□□ -1.07
ABCA3-201ENST00000301732 BPTFQ12830 3046 aa8.34□□□□□ -1.08
ABCA3-201ENST00000301732 TP53AIP1Q9HCN2 124 aa8.32□□□□□ -1.08
ABCA3-201ENST00000301732 LINC01546A6NGU7 62 aa8.32□□□□□ -1.08
ABCA3-201ENST00000301732 DNAH10OSP0CZ25 163 aa8.32□□□□□ -1.08
ABCA3-201ENST00000301732 C9orf129Q5T035 196 aaKnown RBP8.32□□□□□ -1.08
ABCA3-201ENST00000301732 C16orf95Q9H693 158 aa8.32□□□□□ -1.08
ABCA3-201ENST00000301732 LITAFQ99732 161 aa8.3□□□□□ -1.08
ABCA3-201ENST00000301732 LINC00588Q9Y4M8 146 aa8.3□□□□□ -1.08
ABCA3-201ENST00000301732 RPS28P62857 69 aaKnown RBP8.3□□□□□ -1.08
ABCA3-201ENST00000301732 C5orf42Q9H799 3197 aa8.29□□□□□ -1.08
ABCA3-201ENST00000301732 OBSCN-AS1Q96MR7 158 aa8.29□□□□□ -1.08
ABCA3-201ENST00000301732 LOC110117498A0A087WWA1 95 aa8.28□□□□□ -1.08
ABCA3-201ENST00000301732 VPREB1P12018 145 aa8.28□□□□□ -1.08
ABCA3-201ENST00000301732 SMR3BP02814 79 aaPredicted RBP8.26□□□□□ -1.09
ABCA3-201ENST00000301732 IGLV5-45A0A087WSX0 123 aa8.26□□□□□ -1.09
ABCA3-201ENST00000301732 MIR22HGQ0VDD5 57 aa8.26□□□□□ -1.09
ABCA3-201ENST00000301732 C16orf90A8MZG2 172 aa8.26□□□□□ -1.09
ABCA3-201ENST00000301732 ANKRD17O75179 2603 aaKnown RBP8.24□□□□□ -1.09
ABCA3-201ENST00000301732 Q8N1X5 172 aa8.24□□□□□ -1.09
ABCA3-201ENST00000301732 A8MWP4 228 aa8.24□□□□□ -1.09
ABCA3-201ENST00000301732 IGFL1Q6UW32 110 aa8.24□□□□□ -1.09
ABCA3-201ENST00000301732 WIPF1O43516 503 aa8.23□□□□□ -1.09
ABCA3-201ENST00000301732 MRPL34Q9BQ48 92 aaKnown RBP8.23□□□□□ -1.09
ABCA3-201ENST00000301732 CRIPTQ9P021 101 aa8.22□□□□□ -1.09
ABCA3-201ENST00000301732 F8WDY8 70 aa8.22□□□□□ -1.09
ABCA3-201ENST00000301732 UQCR11O14957 56 aa8.22□□□□□ -1.09
ABCA3-201ENST00000301732 COX6B2Q6YFQ2 88 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms