RNA–Protein interactions for RNA: ENST00000298355.7

TRIM9-201, Transcript of tripartite motif containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM9, Length 5,284 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-201ENST00000298355 Q5XG85 94 aa11.77□□□□□ -0.53
TRIM9-201ENST00000298355 ZNF575Q86XF7 245 aa11.76□□□□□ -0.53
TRIM9-201ENST00000298355 Q9BRP9 147 aa11.75□□□□□ -0.53
TRIM9-201ENST00000298355 H3BPC8 53 aa11.75□□□□□ -0.53
TRIM9-201ENST00000298355 CHD8Q9HCK8 2581 aa11.75□□□□□ -0.53
TRIM9-201ENST00000298355 SPAG11AQ6PDA7 123 aa11.74□□□□□ -0.53
TRIM9-201ENST00000298355 SERTAD4-AS1Q5TG53 156 aa11.74□□□□□ -0.53
TRIM9-201ENST00000298355 IGLV9-49A0A0B4J1Y8 123 aa11.74□□□□□ -0.53
TRIM9-201ENST00000298355 MUC4Q99102 2169 aa11.74□□□□□ -0.53
TRIM9-201ENST00000298355 PCNTO95613 3336 aa11.74□□□□□ -0.53
TRIM9-201ENST00000298355 USP9XQ93008 2570 aaPredicted RBP11.73□□□□□ -0.53
TRIM9-201ENST00000298355 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.73□□□□□ -0.53
TRIM9-201ENST00000298355 C6orf48Q9UBA6 75 aa11.73□□□□□ -0.53
TRIM9-201ENST00000298355 Q8NBF4 154 aa11.73□□□□□ -0.53
TRIM9-201ENST00000298355 CYP4F30PQ9H0H9 118 aa11.73□□□□□ -0.53
TRIM9-201ENST00000298355 TLN2Q9Y4G6 2542 aa11.72□□□□□ -0.53
TRIM9-201ENST00000298355 IGHV6-1A0A0B4J1U7 121 aa11.72□□□□□ -0.53
TRIM9-201ENST00000298355 TRAV22A0A0B4J277 110 aa11.72□□□□□ -0.53
TRIM9-201ENST00000298355 OBSCN-AS1Q96MR7 158 aa11.71□□□□□ -0.54
TRIM9-201ENST00000298355 USP9YO00507 2555 aaPredicted RBP11.7□□□□□ -0.54
TRIM9-201ENST00000298355 IGLV6-57P01721 117 aa11.7□□□□□ -0.54
TRIM9-201ENST00000298355 COL27A1Q8IZC6 1860 aaPredicted RBP11.69□□□□□ -0.54
TRIM9-201ENST00000298355 FN1P02751 2386 aaKnown RBP11.69□□□□□ -0.54
TRIM9-201ENST00000298355 FSHBP01225 129 aa11.69□□□□□ -0.54
TRIM9-201ENST00000298355 PRR15Q8IV56 129 aa11.68□□□□□ -0.54
TRIM9-201ENST00000298355 CYSTM1Q9H1C7 97 aa11.68□□□□□ -0.54
TRIM9-201ENST00000298355 KTN1-AS1Q86SY8 53 aa11.67□□□□□ -0.54
TRIM9-201ENST00000298355 LYPD5Q6UWN5 251 aa11.66□□□□□ -0.54
TRIM9-201ENST00000298355 LINC00167Q96N53 147 aa11.66□□□□□ -0.54
TRIM9-201ENST00000298355 ATP11AUNQ6ZP68 121 aa11.64□□□□□ -0.55
TRIM9-201ENST00000298355 TRBV7-4A0A0J9YYF1 115 aa11.63□□□□□ -0.55
TRIM9-201ENST00000298355 TP53AIP1Q9HCN2 124 aa11.63□□□□□ -0.55
TRIM9-201ENST00000298355 CHD7Q9P2D1 2997 aa11.63□□□□□ -0.55
TRIM9-201ENST00000298355 PCSK5Q92824 1860 aa11.63□□□□□ -0.55
TRIM9-201ENST00000298355 ABCA12Q86UK0 2595 aa11.62□□□□□ -0.55
TRIM9-201ENST00000298355 Q6ZTC4 211 aa11.62□□□□□ -0.55
TRIM9-201ENST00000298355 C22orf24Q9Y442 160 aa11.62□□□□□ -0.55
TRIM9-201ENST00000298355 INAFM1C9JVW0 142 aa11.61□□□□□ -0.55
TRIM9-201ENST00000298355 K7EQZ3 153 aa11.61□□□□□ -0.55
TRIM9-201ENST00000298355 A0A1B0GU69 56 aa11.61□□□□□ -0.55
TRIM9-201ENST00000298355 KRTAP10-9P60411 292 aa11.61□□□□□ -0.55
TRIM9-201ENST00000298355 C8orf87E5RJ46 101 aa11.6□□□□□ -0.55
TRIM9-201ENST00000298355 PRLHP81277 87 aa11.6□□□□□ -0.55
TRIM9-201ENST00000298355 A0A0C4DFX4 3053 aa11.59□□□□□ -0.55
TRIM9-201ENST00000298355 NUPR2A6NF83 97 aa11.59□□□□□ -0.55
TRIM9-201ENST00000298355 Q6ZRX8 168 aa11.59□□□□□ -0.55
TRIM9-201ENST00000298355 COA5Q86WW8 74 aa11.59□□□□□ -0.55
TRIM9-201ENST00000298355 LINC00476Q8WZB0 136 aa11.59□□□□□ -0.55
TRIM9-201ENST00000298355 HTTP42858 3142 aa11.58□□□□□ -0.56
TRIM9-201ENST00000298355 SETD2Q9BYW2 2564 aaPredicted RBP11.57□□□□□ -0.56
TRIM9-201ENST00000298355 GVQW2A0A096LPI5 108 aaPredicted RBP11.57□□□□□ -0.56
TRIM9-201ENST00000298355 LOC101927531A0A1B0GV80 90 aa11.57□□□□□ -0.56
TRIM9-201ENST00000298355 C7orf65Q6ZTY9 151 aa11.57□□□□□ -0.56
TRIM9-201ENST00000298355 M0R2N4 97 aa11.56□□□□□ -0.56
TRIM9-201ENST00000298355 VPREB1P12018 145 aa11.55□□□□□ -0.56
TRIM9-201ENST00000298355 FP248Q71RG6 208 aaPredicted RBP11.55□□□□□ -0.56
TRIM9-201ENST00000298355 PRRC2CQ9Y520 2896 aaKnown RBP11.55□□□□□ -0.56
TRIM9-201ENST00000298355 ACYP2P14621 99 aa11.54□□□□□ -0.56
TRIM9-201ENST00000298355 ST20-AS1Q8NBB2 130 aa11.54□□□□□ -0.56
TRIM9-201ENST00000298355 OXTP01178 125 aa11.53□□□□□ -0.56
TRIM9-201ENST00000298355 RPL37AP61513 92 aaKnown RBP11.53□□□□□ -0.56
TRIM9-201ENST00000298355 LRRK2Q5S007 2527 aa11.53□□□□□ -0.56
TRIM9-201ENST00000298355 LY6G6CO95867 125 aa11.53□□□□□ -0.56
TRIM9-201ENST00000298355 Q1T7F1 81 aa11.53□□□□□ -0.56
TRIM9-201ENST00000298355 LINC00528Q8N1L1 170 aa11.53□□□□□ -0.56
TRIM9-201ENST00000298355 JMJD1CQ15652 2540 aa11.53□□□□□ -0.56
TRIM9-201ENST00000298355 ZFYVE26Q68DK2 2539 aa11.52□□□□□ -0.57
TRIM9-201ENST00000298355 LCA10Q71F78 164 aa11.51□□□□□ -0.57
TRIM9-201ENST00000298355 ZNF462Q96JM2 2506 aa11.5□□□□□ -0.57
TRIM9-201ENST00000298355 RETNLBQ9BQ08 111 aa11.48□□□□□ -0.57
TRIM9-201ENST00000298355 C5orf42Q9H799 3197 aa11.48□□□□□ -0.57
TRIM9-201ENST00000298355 CHD9Q3L8U1 2897 aa11.47□□□□□ -0.57
TRIM9-201ENST00000298355 OCR1Q9BZK8 76 aa11.47□□□□□ -0.57
TRIM9-201ENST00000298355 FAM104AQ969W3 186 aa11.47□□□□□ -0.57
TRIM9-201ENST00000298355 SPINK1P00995 79 aa11.46□□□□□ -0.57
TRIM9-201ENST00000298355 C16orf95Q9H693 158 aa11.46□□□□□ -0.57
TRIM9-201ENST00000298355 CIRBP-AS1Q8TBR5 109 aa11.44□□□□□ -0.58
TRIM9-201ENST00000298355 X6R8D5 127 aa11.44□□□□□ -0.58
TRIM9-201ENST00000298355 FAM229BQ4G0N7 80 aa11.43□□□□□ -0.58
TRIM9-201ENST00000298355 A8MWP4 228 aa11.42□□□□□ -0.58
TRIM9-201ENST00000298355 PKD1L2Q7Z442 2459 aa11.42□□□□□ -0.58
TRIM9-201ENST00000298355 IGLV5-52A0A0A0MRZ9 124 aa11.42□□□□□ -0.58
TRIM9-201ENST00000298355 Q6ZRP5 223 aa11.42□□□□□ -0.58
TRIM9-201ENST00000298355 POLQO75417 2590 aa11.41□□□□□ -0.58
TRIM9-201ENST00000298355 Q8N377 158 aa11.41□□□□□ -0.58
TRIM9-201ENST00000298355 KCNQ1DNQ9H478 68 aa11.41□□□□□ -0.58
TRIM9-201ENST00000298355 EPM2AB3EWF7 344 aa11.41□□□□□ -0.58
TRIM9-201ENST00000298355 LINC01556Q5JQF7 62 aa11.41□□□□□ -0.58
TRIM9-201ENST00000298355 SMR3AQ99954 134 aa11.41□□□□□ -0.58
TRIM9-201ENST00000298355 DOPEY1Q5JWR5 2465 aa11.4□□□□□ -0.58
TRIM9-201ENST00000298355 MDFIQ99750 246 aa11.4□□□□□ -0.58
TRIM9-201ENST00000298355 MTORP42345 2549 aa11.39□□□□□ -0.59
TRIM9-201ENST00000298355 CDC42SE1Q9NRR8 79 aa11.39□□□□□ -0.59
TRIM9-201ENST00000298355 RBM12B-AS1Q9P1G2 102 aa11.39□□□□□ -0.59
TRIM9-201ENST00000298355 SPANXA2-OT1Q8N9U9 137 aa11.38□□□□□ -0.59
TRIM9-201ENST00000298355 RANBP2P49792 3224 aaKnown RBP11.37□□□□□ -0.59
TRIM9-201ENST00000298355 MOBPQ13875 183 aa11.36□□□□□ -0.59
TRIM9-201ENST00000298355 A0A096LNT2 108 aa11.35□□□□□ -0.59
TRIM9-201ENST00000298355 OXLD1Q5BKU9 147 aa11.35□□□□□ -0.59
TRIM9-201ENST00000298355 ANKRD17O75179 2603 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms