RNA–Protein interactions for RNA: ENST00000296254.3

TMEM41A-201, Transcript of transmembrane protein 41A, humanhuman

TSL 2 BASIC

Gene TMEM41A, Length 1,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-201ENST00000296254 SMCO4Q9NRQ5 59 aa9.09□□□□□ -0.95
TMEM41A-201ENST00000296254 ZNF625Q96I27 306 aaPredicted RBP9.08□□□□□ -0.96
TMEM41A-201ENST00000296254 SFTA2Q6UW10 78 aa9.07□□□□□ -0.96
TMEM41A-201ENST00000296254 A0A096LNJ9 63 aa9.06□□□□□ -0.96
TMEM41A-201ENST00000296254 KRTAP13-3Q3SY46 172 aa9.06□□□□□ -0.96
TMEM41A-201ENST00000296254 NDUFA6P56556 154 aa9.05□□□□□ -0.96
TMEM41A-201ENST00000296254 ZNF706Q9Y5V0 76 aaPredicted RBP9.05□□□□□ -0.96
TMEM41A-201ENST00000296254 S100PP25815 95 aa9.04□□□□□ -0.96
TMEM41A-201ENST00000296254 ASB16-AS1Q495Z4 193 aa9.04□□□□□ -0.96
TMEM41A-201ENST00000296254 C11orf86A6NJI1 115 aa9.03□□□□□ -0.96
TMEM41A-201ENST00000296254 LCE2BO14633 110 aa9.03□□□□□ -0.96
TMEM41A-201ENST00000296254 GHRHP01286 108 aa9.03□□□□□ -0.96
TMEM41A-201ENST00000296254 COX19Q49B96 90 aa9.03□□□□□ -0.96
TMEM41A-201ENST00000296254 LINC00337Q8N6G1 96 aa9.03□□□□□ -0.96
TMEM41A-201ENST00000296254 Q8NBF4 154 aa9.03□□□□□ -0.96
TMEM41A-201ENST00000296254 FABP9Q0Z7S8 132 aa9.02□□□□□ -0.97
TMEM41A-201ENST00000296254 CLLU1Q5K131 121 aa9.02□□□□□ -0.97
TMEM41A-201ENST00000296254 DAND5Q8N907 189 aa9.02□□□□□ -0.97
TMEM41A-201ENST00000296254 TMEM218A2RU14 115 aa9.01□□□□□ -0.97
TMEM41A-201ENST00000296254 HBDP02042 147 aa9.01□□□□□ -0.97
TMEM41A-201ENST00000296254 TMEM170BQ5T4T1 132 aa9.01□□□□□ -0.97
TMEM41A-201ENST00000296254 PRYO14603 147 aa9□□□□□ -0.97
TMEM41A-201ENST00000296254 LINC00158P58513 81 aa9□□□□□ -0.97
TMEM41A-201ENST00000296254 UQCC3Q6UW78 93 aa9□□□□□ -0.97
TMEM41A-201ENST00000296254 URB1-AS1Q96HZ7 61 aa9□□□□□ -0.97
TMEM41A-201ENST00000296254 SPINK1P00995 79 aa8.99□□□□□ -0.97
TMEM41A-201ENST00000296254 SPRR1AP35321 89 aa8.99□□□□□ -0.97
TMEM41A-201ENST00000296254 LINC01547P58512 204 aaPredicted RBP8.99□□□□□ -0.97
TMEM41A-201ENST00000296254 KRTAP4-1Q9BYQ7 146 aa8.99□□□□□ -0.97
TMEM41A-201ENST00000296254 PMCHL1Q16048 86 aa8.98□□□□□ -0.97
TMEM41A-201ENST00000296254 BAGE3Q86Y29 109 aa8.98□□□□□ -0.97
TMEM41A-201ENST00000296254 A0A0U1RRA0 63 aa8.97□□□□□ -0.97
TMEM41A-201ENST00000296254 LINC00614P0C842 121 aa8.97□□□□□ -0.97
TMEM41A-201ENST00000296254 LINC00483Q53H64 154 aa8.97□□□□□ -0.97
TMEM41A-201ENST00000296254 C18orf32Q8TCD1 76 aa8.97□□□□□ -0.97
TMEM41A-201ENST00000296254 SEC11CQ9BY50 192 aa8.97□□□□□ -0.97
TMEM41A-201ENST00000296254 FSIP2Q5CZC0 6907 aa8.97□□□□□ -0.97
TMEM41A-201ENST00000296254 KRTAP4-16G5E9R7 235 aaPredicted RBP8.96□□□□□ -0.98
TMEM41A-201ENST00000296254 SEC61BP60468 96 aaKnown RBP8.96□□□□□ -0.98
TMEM41A-201ENST00000296254 KCNQ1DNQ9H478 68 aa8.96□□□□□ -0.98
TMEM41A-201ENST00000296254 NCR3O14931 201 aa8.95□□□□□ -0.98
TMEM41A-201ENST00000296254 BOD1L2Q8IYS8 172 aa8.95□□□□□ -0.98
TMEM41A-201ENST00000296254 SMCR5Q8TEV8 140 aa8.95□□□□□ -0.98
TMEM41A-201ENST00000296254 TMEM223A0PJW6 202 aa8.94□□□□□ -0.98
TMEM41A-201ENST00000296254 ETDCA0A1B0GVM5 59 aa8.93□□□□□ -0.98
TMEM41A-201ENST00000296254 SMIM13P0DJ93 91 aa8.93□□□□□ -0.98
TMEM41A-201ENST00000296254 RPS29P62273 56 aaKnown RBP8.93□□□□□ -0.98
TMEM41A-201ENST00000296254 FAM19A2Q8N3H0 131 aa8.93□□□□□ -0.98
TMEM41A-201ENST00000296254 NDUFA12Q9UI09 145 aa8.93□□□□□ -0.98
TMEM41A-201ENST00000296254 CHTOPQ9Y3Y2 248 aaKnown RBP8.93□□□□□ -0.98
TMEM41A-201ENST00000296254 Q8N377 158 aa8.92□□□□□ -0.98
TMEM41A-201ENST00000296254 MIR7-3HGQ8N6C7 128 aa8.92□□□□□ -0.98
TMEM41A-201ENST00000296254 TRBV10-3A0A0K0K1G6 114 aa8.91□□□□□ -0.98
TMEM41A-201ENST00000296254 EIF4EBP3O60516 100 aaPredicted RBP8.91□□□□□ -0.98
TMEM41A-201ENST00000296254 ATP6V1G1O75348 118 aa8.91□□□□□ -0.98
TMEM41A-201ENST00000296254 MOBPQ13875 183 aa8.91□□□□□ -0.98
TMEM41A-201ENST00000296254 RHEBQ15382 184 aa8.91□□□□□ -0.98
TMEM41A-201ENST00000296254 MEIG1Q5JSS6 88 aa8.91□□□□□ -0.98
TMEM41A-201ENST00000296254 GAGE2AQ6NT46 116 aa8.9□□□□□ -0.98
TMEM41A-201ENST00000296254 TRAPPC1Q9Y5R8 145 aa8.9□□□□□ -0.98
TMEM41A-201ENST00000296254 IGLV9-49A0A0B4J1Y8 123 aa8.89□□□□□ -0.99
TMEM41A-201ENST00000296254 RPS10P5Q9NQ39 176 aa8.89□□□□□ -0.99
TMEM41A-201ENST00000296254 TRAV12-1A0A0B4J245 112 aa8.88□□□□□ -0.99
TMEM41A-201ENST00000296254 B5MCH6 92 aa8.88□□□□□ -0.99
TMEM41A-201ENST00000296254 HERV-K104P63124 156 aa8.88□□□□□ -0.99
TMEM41A-201ENST00000296254 XP32Q5T750 250 aa8.88□□□□□ -0.99
TMEM41A-201ENST00000296254 ERC2-IT1O76042 136 aa8.87□□□□□ -0.99
TMEM41A-201ENST00000296254 C10orf91Q5T1B1 145 aa8.87□□□□□ -0.99
TMEM41A-201ENST00000296254 SSBP3-AS1Q7Z2R9 100 aa8.87□□□□□ -0.99
TMEM41A-201ENST00000296254 SLC25A20O43772 301 aa8.86□□□□□ -0.99
TMEM41A-201ENST00000296254 S100A12P80511 92 aa8.86□□□□□ -0.99
TMEM41A-201ENST00000296254 LINC00587B1AMM8 73 aa8.85□□□□□ -0.99
TMEM41A-201ENST00000296254 IFI27L1Q96BM0 104 aa8.85□□□□□ -0.99
TMEM41A-201ENST00000296254 Q9BRP9 147 aa8.85□□□□□ -0.99
TMEM41A-201ENST00000296254 CRCT1Q9UGL9 99 aa8.85□□□□□ -0.99
TMEM41A-201ENST00000296254 IFITM2Q01629 132 aa8.84□□□□□ -0.99
TMEM41A-201ENST00000296254 Q6ZRX8 168 aa8.84□□□□□ -0.99
TMEM41A-201ENST00000296254 COMMD7Q86VX2 200 aa8.84□□□□□ -0.99
TMEM41A-201ENST00000296254 LCE2CQ5TA81 110 aa8.83□□□□□ -1
TMEM41A-201ENST00000296254 MAP1LC3CQ9BXW4 147 aa8.83□□□□□ -1
TMEM41A-201ENST00000296254 TRBV10-2A0A0K0K1G8 114 aa8.82□□□□□ -1
TMEM41A-201ENST00000296254 MYMXA0A1B0GTQ4 84 aa8.82□□□□□ -1
TMEM41A-201ENST00000296254 DDTP30046 118 aa8.82□□□□□ -1
TMEM41A-201ENST00000296254 CHCHD1Q96BP2 118 aaKnown RBP8.82□□□□□ -1
TMEM41A-201ENST00000296254 LOC107984156A0A0G2JMH3 177 aa8.81□□□□□ -1
TMEM41A-201ENST00000296254 ARL17AQ8IVW1 177 aa8.81□□□□□ -1
TMEM41A-201ENST00000296254 TSPEAR-AS2P59090 65 aa8.8□□□□□ -1
TMEM41A-201ENST00000296254 KRTAP19-2Q3LHN2 52 aa8.79□□□□□ -1
TMEM41A-201ENST00000296254 C9orf153Q5TBE3 101 aa8.79□□□□□ -1
TMEM41A-201ENST00000296254 SPANXB1Q9NS25 103 aaPredicted RBP8.79□□□□□ -1
TMEM41A-201ENST00000296254 IGLV6-57P01721 117 aa8.77□□□□□ -1.01
TMEM41A-201ENST00000296254 TRAV23DV6A0A075B6W5 121 aa8.75□□□□□ -1.01
TMEM41A-201ENST00000296254 MT1HP80294 61 aa8.75□□□□□ -1.01
TMEM41A-201ENST00000296254 JOSD1Q15040 202 aaPredicted RBP8.75□□□□□ -1.01
TMEM41A-201ENST00000296254 MIEN1Q9BRT3 115 aa8.75□□□□□ -1.01
TMEM41A-201ENST00000296254 LEPROTO15243 131 aa8.74□□□□□ -1.01
TMEM41A-201ENST00000296254 NDUFC2O95298 119 aa8.74□□□□□ -1.01
TMEM41A-201ENST00000296254 S100A7L2Q5SY68 101 aa8.74□□□□□ -1.01
TMEM41A-201ENST00000296254 H0Y8G0 127 aa8.73□□□□□ -1.01
TMEM41A-201ENST00000296254 HSBP1O75506 76 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 190.4 ms