RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 CCKP06307 115 aa9.5□□□□□ -0.89
HPS3-201ENST00000296051 NHLRC4P0CG21 123 aaPredicted RBP9.49□□□□□ -0.89
HPS3-201ENST00000296051 UNQ6190/PRO20217Q6UXQ8 127 aa9.49□□□□□ -0.89
HPS3-201ENST00000296051 FAM19A4Q96LR4 140 aa9.49□□□□□ -0.89
HPS3-201ENST00000296051 COL27A1Q8IZC6 1860 aaPredicted RBP9.49□□□□□ -0.89
HPS3-201ENST00000296051 BAHCC1Q9P281 2608 aa9.49□□□□□ -0.89
HPS3-201ENST00000296051 TRBV7-7A0A0K0K1E9 115 aa9.48□□□□□ -0.89
HPS3-201ENST00000296051 RPL37AP8A6NKH3 93 aa9.47□□□□□ -0.89
HPS3-201ENST00000296051 SVIPQ8NHG7 77 aa9.47□□□□□ -0.89
HPS3-201ENST00000296051 NTM-AS1Q6ZSK4 140 aa9.47□□□□□ -0.89
HPS3-201ENST00000296051 C1orf134Q5TEV5 83 aa9.47□□□□□ -0.89
HPS3-201ENST00000296051 ATP5EP2Q5VTU8 51 aa9.47□□□□□ -0.89
HPS3-201ENST00000296051 SPINK6Q6UWN8 80 aa9.47□□□□□ -0.89
HPS3-201ENST00000296051 NDUFC2O95298 119 aa9.46□□□□□ -0.89
HPS3-201ENST00000296051 PDE6GP18545 87 aa9.46□□□□□ -0.9
HPS3-201ENST00000296051 Q8N814 137 aa9.46□□□□□ -0.9
HPS3-201ENST00000296051 IGLV5-52A0A0A0MRZ9 124 aa9.45□□□□□ -0.9
HPS3-201ENST00000296051 ZZEF1O43149 2961 aa9.45□□□□□ -0.9
HPS3-201ENST00000296051 LITAFQ99732 161 aa9.44□□□□□ -0.9
HPS3-201ENST00000296051 IGKV4-1P06312 121 aa9.44□□□□□ -0.9
HPS3-201ENST00000296051 CYSRT1A8MQ03 144 aa9.44□□□□□ -0.9
HPS3-201ENST00000296051 CSDC2Q9Y534 153 aaKnown RBP9.44□□□□□ -0.9
HPS3-201ENST00000296051 CELA1Q9UNI1 258 aa9.43□□□□□ -0.9
HPS3-201ENST00000296051 IGLV5-39A0A0G2JS06 123 aa9.43□□□□□ -0.9
HPS3-201ENST00000296051 ZNF575Q86XF7 245 aa9.43□□□□□ -0.9
HPS3-201ENST00000296051 TNRC18O15417 2968 aaPredicted RBP9.43□□□□□ -0.9
HPS3-201ENST00000296051 BEAN1Q3B7T3 259 aa9.43□□□□□ -0.9
HPS3-201ENST00000296051 FHL2Q14192 279 aa9.42□□□□□ -0.9
HPS3-201ENST00000296051 C11orf72Q8NBR9 251 aa9.42□□□□□ -0.9
HPS3-201ENST00000296051 WFDC10BQ8IUB3 73 aa9.42□□□□□ -0.9
HPS3-201ENST00000296051 C6orf223Q8N319 242 aa9.42□□□□□ -0.9
HPS3-201ENST00000296051 Q8IZM0 81 aa9.41□□□□□ -0.9
HPS3-201ENST00000296051 NBEAL1Q6ZS30 2694 aa9.41□□□□□ -0.9
HPS3-201ENST00000296051 SMCR5Q8TEV8 140 aa9.41□□□□□ -0.9
HPS3-201ENST00000296051 SMG1Q96Q15 3661 aaKnown RBP9.41□□□□□ -0.9
HPS3-201ENST00000296051 RELNP78509 3460 aa9.41□□□□□ -0.9
HPS3-201ENST00000296051 H3BQ85 93 aa9.4□□□□□ -0.9
HPS3-201ENST00000296051 Q8N3U1 123 aa9.4□□□□□ -0.9
HPS3-201ENST00000296051 TRBV10-3A0A0K0K1G6 114 aa9.4□□□□□ -0.91
HPS3-201ENST00000296051 PLAC8L1A1L4L8 177 aa9.38□□□□□ -0.91
HPS3-201ENST00000296051 LINC00474Q9P2X8 69 aa9.38□□□□□ -0.91
HPS3-201ENST00000296051 IGLV9-49A0A0B4J1Y8 123 aa9.38□□□□□ -0.91
HPS3-201ENST00000296051 FSHBP01225 129 aa9.38□□□□□ -0.91
HPS3-201ENST00000296051 ZNF73O43830 326 aaPredicted RBP9.38□□□□□ -0.91
HPS3-201ENST00000296051 NDUFC2-KCTD14E9PQ53 114 aa9.38□□□□□ -0.91
HPS3-201ENST00000296051 Q8N9L7 120 aa9.37□□□□□ -0.91
HPS3-201ENST00000296051 MDFIQ99750 246 aa9.37□□□□□ -0.91
HPS3-201ENST00000296051 ASH1LQ9NR48 2969 aaKnown RBP9.37□□□□□ -0.91
HPS3-201ENST00000296051 IGHV3OR16-9A0A0B4J2B5 98 aa9.37□□□□□ -0.91
HPS3-201ENST00000296051 LYPD5Q6UWN5 251 aa9.37□□□□□ -0.91
HPS3-201ENST00000296051 FAM19A3Q7Z5A8 133 aa9.36□□□□□ -0.91
HPS3-201ENST00000296051 LRBAP50851 2863 aa9.36□□□□□ -0.91
HPS3-201ENST00000296051 C4orf26Q17RF5 130 aa9.35□□□□□ -0.91
HPS3-201ENST00000296051 TRAV7A0A075B6U4 112 aa9.35□□□□□ -0.91
HPS3-201ENST00000296051 M0R378 163 aa9.35□□□□□ -0.91
HPS3-201ENST00000296051 FAM30AQ9NZY2 134 aa9.35□□□□□ -0.91
HPS3-201ENST00000296051 SPTSSBQ8NFR3 76 aa9.35□□□□□ -0.91
HPS3-201ENST00000296051 WFDC13Q8IUB5 93 aa9.34□□□□□ -0.91
HPS3-201ENST00000296051 Q6ZVQ6 151 aa9.34□□□□□ -0.91
HPS3-201ENST00000296051 IGLV5-45A0A087WSX0 123 aa9.33□□□□□ -0.92
HPS3-201ENST00000296051 CRYGAP11844 174 aa9.32□□□□□ -0.92
HPS3-201ENST00000296051 GCN1Q92616 2671 aaKnown RBP9.32□□□□□ -0.92
HPS3-201ENST00000296051 NBEAL2Q6ZNJ1 2754 aa9.32□□□□□ -0.92
HPS3-201ENST00000296051 SMIM26A0A096LP01 95 aa9.31□□□□□ -0.92
HPS3-201ENST00000296051 LINC01556Q5JQF7 62 aa9.31□□□□□ -0.92
HPS3-201ENST00000296051 LINC01547P58512 204 aaPredicted RBP9.31□□□□□ -0.92
HPS3-201ENST00000296051 ZNF706Q9Y5V0 76 aaPredicted RBP9.31□□□□□ -0.92
HPS3-201ENST00000296051 FLNCQ14315 2725 aa9.31□□□□□ -0.92
HPS3-201ENST00000296051 EGFEM1PQ0D2K5 195 aa9.3□□□□□ -0.92
HPS3-201ENST00000296051 COX17Q14061 63 aa9.3□□□□□ -0.92
HPS3-201ENST00000296051 MUC7Q8TAX7 377 aa9.3□□□□□ -0.92
HPS3-201ENST00000296051 IGSF10Q6WRI0 2623 aa9.3□□□□□ -0.92
HPS3-201ENST00000296051 LINC00575Q6W349 94 aa9.29□□□□□ -0.92
HPS3-201ENST00000296051 C1orf137Q5JT78 98 aa9.29□□□□□ -0.92
HPS3-201ENST00000296051 SERP1Q9Y6X1 66 aa9.28□□□□□ -0.92
HPS3-201ENST00000296051 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.28□□□□□ -0.92
HPS3-201ENST00000296051 CASC2Q6XLA1 102 aa9.28□□□□□ -0.92
HPS3-201ENST00000296051 ESRGQ1W209 222 aa9.27□□□□□ -0.93
HPS3-201ENST00000296051 WWC2-AS2Q96NR7 200 aa9.27□□□□□ -0.93
HPS3-201ENST00000296051 NDUFC1O43677 76 aa9.27□□□□□ -0.93
HPS3-201ENST00000296051 CIRBP-AS1Q8TBR5 109 aa9.27□□□□□ -0.93
HPS3-201ENST00000296051 SVEP1Q4LDE5 3571 aa9.27□□□□□ -0.93
HPS3-201ENST00000296051 C9orf129Q5T035 196 aaKnown RBP9.26□□□□□ -0.93
HPS3-201ENST00000296051 UNC79Q9P2D8 2635 aa9.26□□□□□ -0.93
HPS3-201ENST00000296051 DHRS4-AS1Q9P1J3 65 aa9.26□□□□□ -0.93
HPS3-201ENST00000296051 C10orf25Q5T742 122 aa9.26□□□□□ -0.93
HPS3-201ENST00000296051 CSMD1Q96PZ7 3565 aa9.25□□□□□ -0.93
HPS3-201ENST00000296051 DEFB116Q30KQ4 102 aa9.25□□□□□ -0.93
HPS3-201ENST00000296051 TMEM254Q8TBM7 123 aa9.24□□□□□ -0.93
HPS3-201ENST00000296051 LINC01561Q8N1V8 128 aa9.23□□□□□ -0.93
HPS3-201ENST00000296051 ITPR1Q14643 2758 aa9.23□□□□□ -0.93
HPS3-201ENST00000296051 SEC61GP60059 68 aa9.23□□□□□ -0.93
HPS3-201ENST00000296051 SPENQ96T58 3664 aaKnown RBP9.23□□□□□ -0.93
HPS3-201ENST00000296051 KLK9Q2XQG4 91 aa9.23□□□□□ -0.93
HPS3-201ENST00000296051 A0A1B0GUV1 79 aa9.22□□□□□ -0.93
HPS3-201ENST00000296051 C1orf195Q5TG92 126 aa9.22□□□□□ -0.93
HPS3-201ENST00000296051 PSPHP1O15172 72 aa9.22□□□□□ -0.93
HPS3-201ENST00000296051 V9GYY9 64 aa9.21□□□□□ -0.93
HPS3-201ENST00000296051 SPATA3Q8NHX4 192 aa9.21□□□□□ -0.94
HPS3-201ENST00000296051 UBR5O95071 2799 aaPredicted RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 186.5 ms