RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 GCN1Q92616 2671 aaKnown RBP7.01□□□□□ -1.29
LMX1A-201ENST00000294816 DEFB4AO15263 64 aa7.01□□□□□ -1.29
LMX1A-201ENST00000294816 REG3AQ06141 175 aa7.01□□□□□ -1.29
LMX1A-201ENST00000294816 SMIM26A0A096LP01 95 aa7.01□□□□□ -1.29
LMX1A-201ENST00000294816 SPAG11BQ08648 103 aa7.01□□□□□ -1.29
LMX1A-201ENST00000294816 COX17Q14061 63 aa7.01□□□□□ -1.29
LMX1A-201ENST00000294816 XAGE1AQ9HD64 81 aa7.01□□□□□ -1.29
LMX1A-201ENST00000294816 LOC110117498A0A087WWA1 95 aa7□□□□□ -1.29
LMX1A-201ENST00000294816 KLKP1Q107X0 134 aa7□□□□□ -1.29
LMX1A-201ENST00000294816 Q8N9L7 120 aa7□□□□□ -1.29
LMX1A-201ENST00000294816 MUC7Q8TAX7 377 aa7□□□□□ -1.29
LMX1A-201ENST00000294816 PRO0628Q9UI54 55 aa7□□□□□ -1.29
LMX1A-201ENST00000294816 A0A1B0GUV1 79 aa7□□□□□ -1.29
LMX1A-201ENST00000294816 CMC4P56277 68 aaPredicted RBP7□□□□□ -1.29
LMX1A-201ENST00000294816 CSNK1G2-AS1Q8NCQ2 148 aa7□□□□□ -1.29
LMX1A-201ENST00000294816 TRBV7-6A0A0J9YX20 115 aa6.99□□□□□ -1.29
LMX1A-201ENST00000294816 MPLKIPQ8TAP9 179 aa6.99□□□□□ -1.29
LMX1A-201ENST00000294816 BRK1Q8WUW1 75 aa6.99□□□□□ -1.29
LMX1A-201ENST00000294816 A0A0U1RQV1 116 aa6.99□□□□□ -1.29
LMX1A-201ENST00000294816 DNAJC9-AS1A6NH13 148 aa6.99□□□□□ -1.29
LMX1A-201ENST00000294816 MIFP14174 115 aa6.99□□□□□ -1.29
LMX1A-201ENST00000294816 HTN3P15516 51 aa6.99□□□□□ -1.29
LMX1A-201ENST00000294816 FP248Q71RG6 208 aaPredicted RBP6.99□□□□□ -1.29
LMX1A-201ENST00000294816 PRO0255Q9UI72 69 aa6.99□□□□□ -1.29
LMX1A-201ENST00000294816 MTORP42345 2549 aa6.98□□□□□ -1.29
LMX1A-201ENST00000294816 DAD1P61803 113 aa6.98□□□□□ -1.29
LMX1A-201ENST00000294816 NREPQ16612 68 aa6.98□□□□□ -1.29
LMX1A-201ENST00000294816 KRTAP10-9P60411 292 aa6.98□□□□□ -1.29
LMX1A-201ENST00000294816 DIRC1Q969H9 104 aa6.98□□□□□ -1.29
LMX1A-201ENST00000294816 APCP25054 2843 aa6.97□□□□□ -1.29
LMX1A-201ENST00000294816 CYSRT1A8MQ03 144 aa6.97□□□□□ -1.29
LMX1A-201ENST00000294816 CXCL6P80162 114 aa6.97□□□□□ -1.29
LMX1A-201ENST00000294816 BCE1O60756 84 aa6.97□□□□□ -1.29
LMX1A-201ENST00000294816 PDE6GP18545 87 aa6.97□□□□□ -1.29
LMX1A-201ENST00000294816 BPY2O14599 106 aa6.96□□□□□ -1.29
LMX1A-201ENST00000294816 C19orf73Q9NVV2 129 aa6.96□□□□□ -1.29
LMX1A-201ENST00000294816 TMEM254Q8TBM7 123 aa6.95□□□□□ -1.3
LMX1A-201ENST00000294816 COX7BP24311 80 aa6.95□□□□□ -1.3
LMX1A-201ENST00000294816 IGLV1-51P01701 117 aa6.95□□□□□ -1.3
LMX1A-201ENST00000294816 KLK12Q9UKR0 248 aa6.95□□□□□ -1.3
LMX1A-201ENST00000294816 AKAP9Q99996 3911 aa6.94□□□□□ -1.3
LMX1A-201ENST00000294816 IGHV4-28A0A0C4DH34 117 aa6.94□□□□□ -1.3
LMX1A-201ENST00000294816 EPM2AB3EWF7 344 aa6.94□□□□□ -1.3
LMX1A-201ENST00000294816 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.94□□□□□ -1.3
LMX1A-201ENST00000294816 NDUFC1O43677 76 aa6.94□□□□□ -1.3
LMX1A-201ENST00000294816 IGLV6-57P01721 117 aa6.94□□□□□ -1.3
LMX1A-201ENST00000294816 NBPF19A0A087WUL8 3843 aa6.93□□□□□ -1.3
LMX1A-201ENST00000294816 ZNF73O43830 326 aaPredicted RBP6.93□□□□□ -1.3
LMX1A-201ENST00000294816 ACANP16112 2415 aa6.93□□□□□ -1.3
LMX1A-201ENST00000294816 TRBV7-4A0A0J9YYF1 115 aa6.93□□□□□ -1.3
LMX1A-201ENST00000294816 C16orf95Q9H693 158 aa6.93□□□□□ -1.3
LMX1A-201ENST00000294816 C3orf84H3BNL1 204 aa6.92□□□□□ -1.3
LMX1A-201ENST00000294816 C9orf66Q5T8R8 295 aa6.92□□□□□ -1.3
LMX1A-201ENST00000294816 KMT2BQ9UMN6 2715 aaPredicted RBP6.92□□□□□ -1.3
LMX1A-201ENST00000294816 ZNF462Q96JM2 2506 aa6.92□□□□□ -1.3
LMX1A-201ENST00000294816 FAM229BQ4G0N7 80 aa6.91□□□□□ -1.3
LMX1A-201ENST00000294816 HIGD2BQ4VC39 106 aa6.91□□□□□ -1.3
LMX1A-201ENST00000294816 DEFB105AQ8NG35 78 aa6.91□□□□□ -1.3
LMX1A-201ENST00000294816 DEFB113Q30KQ7 82 aa6.91□□□□□ -1.3
LMX1A-201ENST00000294816 DEFB135Q30KP9 77 aa6.91□□□□□ -1.3
LMX1A-201ENST00000294816 IGSF10Q6WRI0 2623 aa6.9□□□□□ -1.3
LMX1A-201ENST00000294816 FUSP35637 526 aaKnown RBP eCLIP6.9□□□□□ -1.3
LMX1A-201ENST00000294816 PRYO14603 147 aa6.89□□□□□ -1.31
LMX1A-201ENST00000294816 ATP5EP56381 51 aaPredicted RBP6.89□□□□□ -1.31
LMX1A-201ENST00000294816 CELA1Q9UNI1 258 aa6.89□□□□□ -1.31
LMX1A-201ENST00000294816 X6R8D5 127 aa6.89□□□□□ -1.31
LMX1A-201ENST00000294816 HIGD2AQ9BW72 106 aa6.89□□□□□ -1.31
LMX1A-201ENST00000294816 C6orf48Q9UBA6 75 aa6.89□□□□□ -1.31
LMX1A-201ENST00000294816 LRCOL1A6NCL2 159 aa6.89□□□□□ -1.31
LMX1A-201ENST00000294816 H3BQ85 93 aa6.89□□□□□ -1.31
LMX1A-201ENST00000294816 FLNAP21333 2647 aaKnown RBP6.88□□□□□ -1.31
LMX1A-201ENST00000294816 ITPR3Q14573 2671 aa6.88□□□□□ -1.31
LMX1A-201ENST00000294816 HIVEP2P31629 2446 aa6.88□□□□□ -1.31
LMX1A-201ENST00000294816 A0A0J9YWU9 116 aa6.88□□□□□ -1.31
LMX1A-201ENST00000294816 IGHV4-30-4P0DP06 118 aa6.88□□□□□ -1.31
LMX1A-201ENST00000294816 CAMK2N2Q96S95 79 aa6.88□□□□□ -1.31
LMX1A-201ENST00000294816 LINC00612Q8N6U2 182 aa6.87□□□□□ -1.31
LMX1A-201ENST00000294816 FAM30AQ9NZY2 134 aa6.87□□□□□ -1.31
LMX1A-201ENST00000294816 IGKV4-1P06312 121 aa6.86□□□□□ -1.31
LMX1A-201ENST00000294816 ELOF1P60002 83 aaKnown RBP6.86□□□□□ -1.31
LMX1A-201ENST00000294816 C1orf195Q5TG92 126 aa6.86□□□□□ -1.31
LMX1A-201ENST00000294816 PRB2P02812 416 aaPredicted RBP6.85□□□□□ -1.31
LMX1A-201ENST00000294816 ESRGQ1W209 222 aa6.85□□□□□ -1.31
LMX1A-201ENST00000294816 LYRM9A8MSI8 78 aa6.84□□□□□ -1.31
LMX1A-201ENST00000294816 M0R378 163 aa6.83□□□□□ -1.32
LMX1A-201ENST00000294816 LELP1Q5T871 98 aa6.83□□□□□ -1.32
LMX1A-201ENST00000294816 SMIM29Q86T20 159 aa6.83□□□□□ -1.32
LMX1A-201ENST00000294816 OCR1Q9BZK8 76 aa6.83□□□□□ -1.32
LMX1A-201ENST00000294816 VPREB1P12018 145 aa6.82□□□□□ -1.32
LMX1A-201ENST00000294816 J3QL48 77 aa6.82□□□□□ -1.32
LMX1A-201ENST00000294816 PRR4Q16378 134 aa6.82□□□□□ -1.32
LMX1A-201ENST00000294816 Q6ZRU5 148 aa6.81□□□□□ -1.32
LMX1A-201ENST00000294816 ERC2-IT1O76042 136 aa6.81□□□□□ -1.32
LMX1A-201ENST00000294816 LINC00528Q8N1L1 170 aa6.81□□□□□ -1.32
LMX1A-201ENST00000294816 V9GYY9 64 aa6.8□□□□□ -1.32
LMX1A-201ENST00000294816 GVQW2A0A096LPI5 108 aaPredicted RBP6.79□□□□□ -1.32
LMX1A-201ENST00000294816 Q6ZTC4 211 aa6.78□□□□□ -1.32
LMX1A-201ENST00000294816 NKAPP1Q8N9T2 125 aa6.78□□□□□ -1.32
LMX1A-201ENST00000294816 ZNF469Q96JG9 3925 aaPredicted RBP6.78□□□□□ -1.32
LMX1A-201ENST00000294816 PRR34Q9NV39 138 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms