RNA–Protein interactions for RNA: ENST00000293925.9

CRAMP1-201, Transcript of cramped chromatin regulator homolog 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CRAMP1, Length 7,671 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-201ENST00000293925 SETD2Q9BYW2 2564 aaPredicted RBP11.28□□□□□ -0.6
CRAMP1-201ENST00000293925 BCE1O60756 84 aa11.27□□□□□ -0.61
CRAMP1-201ENST00000293925 LTBP2Q14767 1821 aa11.27□□□□□ -0.61
CRAMP1-201ENST00000293925 COX8CQ7Z4L0 72 aa11.26□□□□□ -0.61
CRAMP1-201ENST00000293925 ABCA12Q86UK0 2595 aa11.25□□□□□ -0.61
CRAMP1-201ENST00000293925 SMCPP49901 116 aaPredicted RBP11.25□□□□□ -0.61
CRAMP1-201ENST00000293925 LINC00167Q96N53 147 aa11.25□□□□□ -0.61
CRAMP1-201ENST00000293925 MDFIQ99750 246 aa11.24□□□□□ -0.61
CRAMP1-201ENST00000293925 RPL37AP61513 92 aaKnown RBP11.24□□□□□ -0.61
CRAMP1-201ENST00000293925 FAM218AQ96MZ4 157 aa11.24□□□□□ -0.61
CRAMP1-201ENST00000293925 H3BPC8 53 aa11.24□□□□□ -0.61
CRAMP1-201ENST00000293925 Q6ZQT0 140 aa11.23□□□□□ -0.61
CRAMP1-201ENST00000293925 LINC01600Q96MT4 127 aa11.22□□□□□ -0.61
CRAMP1-201ENST00000293925 C11orf72Q8NBR9 251 aa11.22□□□□□ -0.61
CRAMP1-201ENST00000293925 LINC00476Q8WZB0 136 aa11.22□□□□□ -0.61
CRAMP1-201ENST00000293925 CDSNQ15517 529 aa11.22□□□□□ -0.61
CRAMP1-201ENST00000293925 IGLV5-39A0A0G2JS06 123 aa11.21□□□□□ -0.62
CRAMP1-201ENST00000293925 CHTF8P0CG12 524 aa11.18□□□□□ -0.62
CRAMP1-201ENST00000293925 CRIPTQ9P021 101 aa11.18□□□□□ -0.62
CRAMP1-201ENST00000293925 IGHV3OR16-9A0A0B4J2B5 98 aa11.18□□□□□ -0.62
CRAMP1-201ENST00000293925 A8MUN3 132 aa11.18□□□□□ -0.62
CRAMP1-201ENST00000293925 ELOF1P60002 83 aaKnown RBP11.17□□□□□ -0.62
CRAMP1-201ENST00000293925 Q8NBF4 154 aa11.17□□□□□ -0.62
CRAMP1-201ENST00000293925 APLNQ9ULZ1 77 aa11.17□□□□□ -0.62
CRAMP1-201ENST00000293925 COL4A4P53420 1690 aaPredicted RBP11.17□□□□□ -0.62
CRAMP1-201ENST00000293925 A0A1B0GW54 56 aa11.16□□□□□ -0.62
CRAMP1-201ENST00000293925 Q96NJ1 140 aa11.16□□□□□ -0.62
CRAMP1-201ENST00000293925 LOC110117498A0A087WWA1 95 aa11.15□□□□□ -0.62
CRAMP1-201ENST00000293925 PHF5AQ7RTV0 110 aaKnown RBP11.15□□□□□ -0.62
CRAMP1-201ENST00000293925 FAM19A4Q96LR4 140 aa11.15□□□□□ -0.62
CRAMP1-201ENST00000293925 COA5Q86WW8 74 aa11.15□□□□□ -0.63
CRAMP1-201ENST00000293925 IGF2RP11717 2491 aa11.14□□□□□ -0.63
CRAMP1-201ENST00000293925 UQCR11O14957 56 aa11.14□□□□□ -0.63
CRAMP1-201ENST00000293925 TYMSOSQ8TAI1 123 aa11.14□□□□□ -0.63
CRAMP1-201ENST00000293925 PRO0461Q9UI25 63 aa11.13□□□□□ -0.63
CRAMP1-201ENST00000293925 COL27A1Q8IZC6 1860 aaPredicted RBP11.13□□□□□ -0.63
CRAMP1-201ENST00000293925 KIF25-AS1Q9Y6Z4 181 aa11.12□□□□□ -0.63
CRAMP1-201ENST00000293925 C16orf95Q9H693 158 aa11.12□□□□□ -0.63
CRAMP1-201ENST00000293925 PKD1L2Q7Z442 2459 aa11.12□□□□□ -0.63
CRAMP1-201ENST00000293925 TRBV7-4A0A0J9YYF1 115 aa11.12□□□□□ -0.63
CRAMP1-201ENST00000293925 LINC01546A6NGU7 62 aa11.12□□□□□ -0.63
CRAMP1-201ENST00000293925 FHL3Q13643 280 aa11.12□□□□□ -0.63
CRAMP1-201ENST00000293925 ST20-AS1Q8NBB2 130 aa11.11□□□□□ -0.63
CRAMP1-201ENST00000293925 PIEZO1Q92508 2521 aa11.11□□□□□ -0.63
CRAMP1-201ENST00000293925 KRTAP10-9P60411 292 aa11.11□□□□□ -0.63
CRAMP1-201ENST00000293925 Q6ZRX8 168 aa11.11□□□□□ -0.63
CRAMP1-201ENST00000293925 CYP4F30PQ9H0H9 118 aa11.1□□□□□ -0.63
CRAMP1-201ENST00000293925 EPM2AB3EWF7 344 aa11.1□□□□□ -0.63
CRAMP1-201ENST00000293925 LOC101927531A0A1B0GV80 90 aa11.08□□□□□ -0.64
CRAMP1-201ENST00000293925 MIR22HGQ0VDD5 57 aa11.08□□□□□ -0.64
CRAMP1-201ENST00000293925 NCOR2Q9Y618 2525 aa11.06□□□□□ -0.64
CRAMP1-201ENST00000293925 NHLRC4P0CG21 123 aaPredicted RBP11.06□□□□□ -0.64
CRAMP1-201ENST00000293925 K7EQZ3 153 aa11.05□□□□□ -0.64
CRAMP1-201ENST00000293925 A8MWP4 228 aa11.04□□□□□ -0.64
CRAMP1-201ENST00000293925 USP9XQ93008 2570 aaPredicted RBP11.03□□□□□ -0.64
CRAMP1-201ENST00000293925 CENPFP49454 3210 aa11.03□□□□□ -0.64
CRAMP1-201ENST00000293925 IGLV5-45A0A087WSX0 123 aa11.02□□□□□ -0.65
CRAMP1-201ENST00000293925 CD164Q04900 197 aa11.01□□□□□ -0.65
CRAMP1-201ENST00000293925 C9orf129Q5T035 196 aaKnown RBP11.01□□□□□ -0.65
CRAMP1-201ENST00000293925 MRPL34Q9BQ48 92 aaKnown RBP11.01□□□□□ -0.65
CRAMP1-201ENST00000293925 FAM229AH3BQW9 127 aa11□□□□□ -0.65
CRAMP1-201ENST00000293925 Q6ZRP5 223 aa10.99□□□□□ -0.65
CRAMP1-201ENST00000293925 LINC00315P59091 139 aa10.99□□□□□ -0.65
CRAMP1-201ENST00000293925 C16orf90A8MZG2 172 aa10.98□□□□□ -0.65
CRAMP1-201ENST00000293925 RTL8CO15255 209 aa10.98□□□□□ -0.65
CRAMP1-201ENST00000293925 MUC22E2RYF6 1773 aaPredicted RBP10.97□□□□□ -0.65
CRAMP1-201ENST00000293925 ERC2-IT1O76042 136 aa10.96□□□□□ -0.65
CRAMP1-201ENST00000293925 IGLV6-57P01721 117 aa10.96□□□□□ -0.65
CRAMP1-201ENST00000293925 KTN1-AS1Q86SY8 53 aa10.96□□□□□ -0.65
CRAMP1-201ENST00000293925 LINC00336Q6ZUF6 198 aa10.95□□□□□ -0.66
CRAMP1-201ENST00000293925 A0A1W2PPR1 153 aa10.93□□□□□ -0.66
CRAMP1-201ENST00000293925 ANKRD17O75179 2603 aaKnown RBP10.93□□□□□ -0.66
CRAMP1-201ENST00000293925 FAM168BA1KXE4 195 aa10.93□□□□□ -0.66
CRAMP1-201ENST00000293925 LCA10Q71F78 164 aa10.92□□□□□ -0.66
CRAMP1-201ENST00000293925 COX6B2Q6YFQ2 88 aa10.91□□□□□ -0.66
CRAMP1-201ENST00000293925 DSCR10P59022 87 aa10.9□□□□□ -0.66
CRAMP1-201ENST00000293925 LUZP6Q538Z0 58 aa10.89□□□□□ -0.67
CRAMP1-201ENST00000293925 BPTFQ12830 3046 aa10.88□□□□□ -0.67
CRAMP1-201ENST00000293925 SPTBN4Q9H254 2564 aa10.87□□□□□ -0.67
CRAMP1-201ENST00000293925 A0A0D9SG42 100 aa10.87□□□□□ -0.67
CRAMP1-201ENST00000293925 H3BNG1 76 aa10.86□□□□□ -0.67
CRAMP1-201ENST00000293925 LINC01554Q52M75 96 aa10.86□□□□□ -0.67
CRAMP1-201ENST00000293925 ANKRD11Q6UB99 2663 aaPredicted RBP10.86□□□□□ -0.67
CRAMP1-201ENST00000293925 GVQW2A0A096LPI5 108 aaPredicted RBP10.86□□□□□ -0.67
CRAMP1-201ENST00000293925 USP9YO00507 2555 aaPredicted RBP10.86□□□□□ -0.67
CRAMP1-201ENST00000293925 CDC42SE1Q9NRR8 79 aa10.85□□□□□ -0.67
CRAMP1-201ENST00000293925 OBSCN-AS1Q96MR7 158 aa10.84□□□□□ -0.67
CRAMP1-201ENST00000293925 NBDYA0A0U1RRE5 68 aa10.84□□□□□ -0.67
CRAMP1-201ENST00000293925 KLKP1Q107X0 134 aa10.83□□□□□ -0.68
CRAMP1-201ENST00000293925 USP24Q9UPU5 2620 aa10.83□□□□□ -0.68
CRAMP1-201ENST00000293925 C9orf92A6NGG3 77 aa10.83□□□□□ -0.68
CRAMP1-201ENST00000293925 LINC00588Q9Y4M8 146 aa10.83□□□□□ -0.68
CRAMP1-201ENST00000293925 MTORP42345 2549 aa10.83□□□□□ -0.68
CRAMP1-201ENST00000293925 C8orf17Q9NRJ1 99 aa10.82□□□□□ -0.68
CRAMP1-201ENST00000293925 PRR15Q8IV56 129 aa10.82□□□□□ -0.68
CRAMP1-201ENST00000293925 POLQO75417 2590 aa10.82□□□□□ -0.68
CRAMP1-201ENST00000293925 IGFL1Q6UW32 110 aa10.81□□□□□ -0.68
CRAMP1-201ENST00000293925 LITAFQ99732 161 aa10.81□□□□□ -0.68
CRAMP1-201ENST00000293925 H7BZZ5 65 aa10.78□□□□□ -0.68
CRAMP1-201ENST00000293925 J3QL48 77 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms