RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 WFDC13Q8IUB5 93 aa8.54□□□□□ -1.04
SYNGAP1-201ENST00000293748 Q8N9L7 120 aa8.54□□□□□ -1.04
SYNGAP1-201ENST00000293748 LRBAP50851 2863 aa8.54□□□□□ -1.04
SYNGAP1-201ENST00000293748 TSPEAR-AS2P59090 65 aa8.54□□□□□ -1.04
SYNGAP1-201ENST00000293748 DCHS2Q6V1P9 2916 aa8.53□□□□□ -1.04
SYNGAP1-201ENST00000293748 TET2Q6N021 2002 aaPredicted RBP8.53□□□□□ -1.04
SYNGAP1-201ENST00000293748 OTOGQ6ZRI0 2925 aa8.53□□□□□ -1.04
SYNGAP1-201ENST00000293748 DEFB131BA0A096LNP1 70 aa8.52□□□□□ -1.05
SYNGAP1-201ENST00000293748 PRR4Q16378 134 aa8.52□□□□□ -1.05
SYNGAP1-201ENST00000293748 LELP1Q5T871 98 aa8.52□□□□□ -1.05
SYNGAP1-201ENST00000293748 LINC00482Q8N8I6 264 aa8.52□□□□□ -1.05
SYNGAP1-201ENST00000293748 FAM19A5Q7Z5A7 132 aaPredicted RBP8.52□□□□□ -1.05
SYNGAP1-201ENST00000293748 TACC2O95359 2948 aa8.52□□□□□ -1.05
SYNGAP1-201ENST00000293748 A0A087WVE0 104 aa8.52□□□□□ -1.05
SYNGAP1-201ENST00000293748 A0A087WZ39 114 aa8.51□□□□□ -1.05
SYNGAP1-201ENST00000293748 IGLV2-18A0A075B6J9 118 aa8.51□□□□□ -1.05
SYNGAP1-201ENST00000293748 IGKV2-28A0A075B6P5 120 aa8.51□□□□□ -1.05
SYNGAP1-201ENST00000293748 IGKV2D-28P01615 120 aa8.51□□□□□ -1.05
SYNGAP1-201ENST00000293748 Q8N814 137 aa8.51□□□□□ -1.05
SYNGAP1-201ENST00000293748 AMELXQ99217 191 aa8.51□□□□□ -1.05
SYNGAP1-201ENST00000293748 LOC100131303A0A0U1RQF7 123 aa8.5□□□□□ -1.05
SYNGAP1-201ENST00000293748 KRTAP10-3P60369 221 aa8.49□□□□□ -1.05
SYNGAP1-201ENST00000293748 C18orf65Q6ZTR6 163 aa8.49□□□□□ -1.05
SYNGAP1-201ENST00000293748 CSDC2Q9Y534 153 aaKnown RBP8.49□□□□□ -1.05
SYNGAP1-201ENST00000293748 CDIP1Q9H305 208 aa8.49□□□□□ -1.05
SYNGAP1-201ENST00000293748 ADAMTSL4-AS1Q5T5F5 129 aa8.48□□□□□ -1.05
SYNGAP1-201ENST00000293748 TRBV7-7A0A0K0K1E9 115 aa8.48□□□□□ -1.05
SYNGAP1-201ENST00000293748 CHCHD7Q9BUK0 85 aa8.48□□□□□ -1.05
SYNGAP1-201ENST00000293748 SPENQ96T58 3664 aaKnown RBP8.48□□□□□ -1.05
SYNGAP1-201ENST00000293748 OXLD1Q5BKU9 147 aa8.47□□□□□ -1.05
SYNGAP1-201ENST00000293748 MAP1AP78559 2803 aaPredicted RBP8.47□□□□□ -1.05
SYNGAP1-201ENST00000293748 IL17DQ8TAD2 202 aa8.47□□□□□ -1.05
SYNGAP1-201ENST00000293748 FAM30AQ9NZY2 134 aa8.47□□□□□ -1.05
SYNGAP1-201ENST00000293748 PRYO14603 147 aa8.47□□□□□ -1.05
SYNGAP1-201ENST00000293748 Q8N3U1 123 aa8.47□□□□□ -1.05
SYNGAP1-201ENST00000293748 FHL3Q13643 280 aa8.46□□□□□ -1.05
SYNGAP1-201ENST00000293748 CELA1Q9UNI1 258 aa8.46□□□□□ -1.05
SYNGAP1-201ENST00000293748 A0A087WYN8 130 aa8.46□□□□□ -1.06
SYNGAP1-201ENST00000293748 SOSTDC1Q6X4U4 206 aa8.46□□□□□ -1.06
SYNGAP1-201ENST00000293748 A0A0J9YWU9 116 aa8.45□□□□□ -1.06
SYNGAP1-201ENST00000293748 EGFEM1PQ0D2K5 195 aa8.45□□□□□ -1.06
SYNGAP1-201ENST00000293748 PRM2P04554 102 aa8.45□□□□□ -1.06
SYNGAP1-201ENST00000293748 PMAIP1Q13794 54 aa8.45□□□□□ -1.06
SYNGAP1-201ENST00000293748 ZNF706Q9Y5V0 76 aaPredicted RBP8.44□□□□□ -1.06
SYNGAP1-201ENST00000293748 LOC107984640A0A0U1RRK4 108 aa8.44□□□□□ -1.06
SYNGAP1-201ENST00000293748 KPRPQ5T749 579 aaPredicted RBP8.44□□□□□ -1.06
SYNGAP1-201ENST00000293748 UNQ6190/PRO20217Q6UXQ8 127 aa8.44□□□□□ -1.06
SYNGAP1-201ENST00000293748 LINC00208Q96KT6 92 aa8.43□□□□□ -1.06
SYNGAP1-201ENST00000293748 COX6A2Q02221 97 aa8.43□□□□□ -1.06
SYNGAP1-201ENST00000293748 COL6A5A8TX70 2615 aa8.42□□□□□ -1.06
SYNGAP1-201ENST00000293748 TRBV10-3A0A0K0K1G6 114 aa8.42□□□□□ -1.06
SYNGAP1-201ENST00000293748 C1orf137Q5JT78 98 aa8.42□□□□□ -1.06
SYNGAP1-201ENST00000293748 TRAV10A0A0B4J240 114 aa8.42□□□□□ -1.06
SYNGAP1-201ENST00000293748 KLK9Q2XQG4 91 aa8.42□□□□□ -1.06
SYNGAP1-201ENST00000293748 PPDPFQ9H3Y8 114 aa8.42□□□□□ -1.06
SYNGAP1-201ENST00000293748 ODF3L2Q3SX64 289 aa8.42□□□□□ -1.06
SYNGAP1-201ENST00000293748 WFDC10AQ9H1F0 79 aa8.42□□□□□ -1.06
SYNGAP1-201ENST00000293748 LINC00846Q9NV44 126 aa8.42□□□□□ -1.06
SYNGAP1-201ENST00000293748 AGRNO00468 2067 aa8.41□□□□□ -1.06
SYNGAP1-201ENST00000293748 IGLV1-51P01701 117 aa8.41□□□□□ -1.06
SYNGAP1-201ENST00000293748 TMEM254Q8TBM7 123 aa8.41□□□□□ -1.06
SYNGAP1-201ENST00000293748 BEAN1Q3B7T3 259 aa8.4□□□□□ -1.06
SYNGAP1-201ENST00000293748 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.4□□□□□ -1.07
SYNGAP1-201ENST00000293748 RPL37AP8A6NKH3 93 aa8.4□□□□□ -1.07
SYNGAP1-201ENST00000293748 LINC01546A6NGU7 62 aa8.39□□□□□ -1.07
SYNGAP1-201ENST00000293748 SPINK6Q6UWN8 80 aa8.39□□□□□ -1.07
SYNGAP1-201ENST00000293748 Q6ZVQ6 151 aa8.39□□□□□ -1.07
SYNGAP1-201ENST00000293748 NBPF19A0A087WUL8 3843 aa8.39□□□□□ -1.07
SYNGAP1-201ENST00000293748 LRCOL1A6NCL2 159 aa8.39□□□□□ -1.07
SYNGAP1-201ENST00000293748 IGLV4-60A0A075B6I1 120 aa8.38□□□□□ -1.07
SYNGAP1-201ENST00000293748 CRYGAP11844 174 aa8.38□□□□□ -1.07
SYNGAP1-201ENST00000293748 C9orf116Q5BN46 136 aaPredicted RBP8.37□□□□□ -1.07
SYNGAP1-201ENST00000293748 ZANQ9Y493 2812 aa8.37□□□□□ -1.07
SYNGAP1-201ENST00000293748 LINC01561Q8N1V8 128 aa8.37□□□□□ -1.07
SYNGAP1-201ENST00000293748 PRO0628Q9UI54 55 aa8.37□□□□□ -1.07
SYNGAP1-201ENST00000293748 PRR3P79522 188 aaKnown RBP8.37□□□□□ -1.07
SYNGAP1-201ENST00000293748 PRO0461Q9UI25 63 aa8.37□□□□□ -1.07
SYNGAP1-201ENST00000293748 KIF25-AS1Q9Y6Z4 181 aa8.36□□□□□ -1.07
SYNGAP1-201ENST00000293748 STAB1Q9NY15 2570 aa8.36□□□□□ -1.07
SYNGAP1-201ENST00000293748 BCE1O60756 84 aa8.36□□□□□ -1.07
SYNGAP1-201ENST00000293748 SMCPP49901 116 aaPredicted RBP8.36□□□□□ -1.07
SYNGAP1-201ENST00000293748 LINC00575Q6W349 94 aa8.36□□□□□ -1.07
SYNGAP1-201ENST00000293748 LINC01547P58512 204 aaPredicted RBP8.36□□□□□ -1.07
SYNGAP1-201ENST00000293748 RPS28P62857 69 aaKnown RBP8.36□□□□□ -1.07
SYNGAP1-201ENST00000293748 CXCL6P80162 114 aa8.36□□□□□ -1.07
SYNGAP1-201ENST00000293748 C10orf25Q5T742 122 aa8.36□□□□□ -1.07
SYNGAP1-201ENST00000293748 C7orf33Q8WU49 177 aa8.36□□□□□ -1.07
SYNGAP1-201ENST00000293748 TRBV7-6A0A0J9YX20 115 aa8.35□□□□□ -1.07
SYNGAP1-201ENST00000293748 A0A1B0GUV1 79 aa8.35□□□□□ -1.07
SYNGAP1-201ENST00000293748 ESRGQ1W209 222 aa8.35□□□□□ -1.07
SYNGAP1-201ENST00000293748 LINC00337Q8N6G1 96 aa8.35□□□□□ -1.07
SYNGAP1-201ENST00000293748 NHLRC4P0CG21 123 aaPredicted RBP8.35□□□□□ -1.07
SYNGAP1-201ENST00000293748 LINC00474Q9P2X8 69 aa8.35□□□□□ -1.07
SYNGAP1-201ENST00000293748 EDN2P20800 178 aa8.34□□□□□ -1.07
SYNGAP1-201ENST00000293748 PLAC8L1A1L4L8 177 aa8.34□□□□□ -1.07
SYNGAP1-201ENST00000293748 IGLV5-39A0A0G2JS06 123 aa8.34□□□□□ -1.08
SYNGAP1-201ENST00000293748 FHL2Q14192 279 aa8.34□□□□□ -1.08
SYNGAP1-201ENST00000293748 F8WDY8 70 aa8.33□□□□□ -1.08
SYNGAP1-201ENST00000293748 PSPHP1O15172 72 aa8.33□□□□□ -1.08
SYNGAP1-201ENST00000293748 hDV103S1A0JD37 113 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms