RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 COL27A1Q8IZC6 1860 aaPredicted RBP7.66□□□□□ -1.18
PKNOX1-201ENST00000291547 ZNF292O60281 2723 aa7.66□□□□□ -1.18
PKNOX1-201ENST00000291547 HCG22E2RYF7 251 aa7.66□□□□□ -1.18
PKNOX1-201ENST00000291547 EDN2P20800 178 aa7.65□□□□□ -1.18
PKNOX1-201ENST00000291547 AGRNO00468 2067 aa7.65□□□□□ -1.18
PKNOX1-201ENST00000291547 A8MTW9 85 aa7.65□□□□□ -1.19
PKNOX1-201ENST00000291547 LY6G6CO95867 125 aa7.64□□□□□ -1.19
PKNOX1-201ENST00000291547 CD164Q04900 197 aa7.64□□□□□ -1.19
PKNOX1-201ENST00000291547 LIMD2Q9BT23 127 aa7.64□□□□□ -1.19
PKNOX1-201ENST00000291547 Q9UF83 564 aa7.64□□□□□ -1.19
PKNOX1-201ENST00000291547 SERTAD4-AS1Q5TG53 156 aa7.63□□□□□ -1.19
PKNOX1-201ENST00000291547 C1orf64Q8NEQ6 169 aa7.63□□□□□ -1.19
PKNOX1-201ENST00000291547 EPG5Q9HCE0 2579 aa7.62□□□□□ -1.19
PKNOX1-201ENST00000291547 LINC00337Q8N6G1 96 aa7.62□□□□□ -1.19
PKNOX1-201ENST00000291547 LINC00336Q6ZUF6 198 aa7.62□□□□□ -1.19
PKNOX1-201ENST00000291547 PRRC2CQ9Y520 2896 aaKnown RBP7.61□□□□□ -1.19
PKNOX1-201ENST00000291547 KRTAP10-9P60411 292 aa7.61□□□□□ -1.19
PKNOX1-201ENST00000291547 OXLD1Q5BKU9 147 aa7.61□□□□□ -1.19
PKNOX1-201ENST00000291547 CXCL6P80162 114 aa7.61□□□□□ -1.19
PKNOX1-201ENST00000291547 FHL2Q14192 279 aa7.61□□□□□ -1.19
PKNOX1-201ENST00000291547 LY6G6DO95868 133 aa7.6□□□□□ -1.19
PKNOX1-201ENST00000291547 LINC01556Q5JQF7 62 aa7.59□□□□□ -1.19
PKNOX1-201ENST00000291547 Q6ZSN1 163 aa7.59□□□□□ -1.19
PKNOX1-201ENST00000291547 SMIM29Q86T20 159 aa7.59□□□□□ -1.19
PKNOX1-201ENST00000291547 AVPP01185 164 aa7.58□□□□□ -1.2
PKNOX1-201ENST00000291547 SPAG11AQ6PDA7 123 aa7.58□□□□□ -1.2
PKNOX1-201ENST00000291547 A0A1B0GU69 56 aa7.57□□□□□ -1.2
PKNOX1-201ENST00000291547 IGKV2D-30A0A075B6S6 120 aa7.57□□□□□ -1.2
PKNOX1-201ENST00000291547 IGKV2-30P06310 120 aa7.57□□□□□ -1.2
PKNOX1-201ENST00000291547 A0A1B0GUV1 79 aa7.57□□□□□ -1.2
PKNOX1-201ENST00000291547 COL6A3P12111 3177 aa7.57□□□□□ -1.2
PKNOX1-201ENST00000291547 PRLHP81277 87 aa7.57□□□□□ -1.2
PKNOX1-201ENST00000291547 Q6ZTC4 211 aa7.57□□□□□ -1.2
PKNOX1-201ENST00000291547 C2orf48Q96LS8 159 aa7.57□□□□□ -1.2
PKNOX1-201ENST00000291547 USP9YO00507 2555 aaPredicted RBP7.57□□□□□ -1.2
PKNOX1-201ENST00000291547 LRRK2Q5S007 2527 aa7.57□□□□□ -1.2
PKNOX1-201ENST00000291547 SPTBN5Q9NRC6 3674 aaKnown RBP7.56□□□□□ -1.2
PKNOX1-201ENST00000291547 RAI1Q7Z5J4 1906 aaPredicted RBP7.56□□□□□ -1.2
PKNOX1-201ENST00000291547 IGLV1-51P01701 117 aa7.56□□□□□ -1.2
PKNOX1-201ENST00000291547 SMCR5Q8TEV8 140 aa7.56□□□□□ -1.2
PKNOX1-201ENST00000291547 SPATA3Q8NHX4 192 aa7.55□□□□□ -1.2
PKNOX1-201ENST00000291547 LINC01561Q8N1V8 128 aa7.55□□□□□ -1.2
PKNOX1-201ENST00000291547 Q6ZRU5 148 aa7.55□□□□□ -1.2
PKNOX1-201ENST00000291547 NUPR2A6NF83 97 aa7.54□□□□□ -1.2
PKNOX1-201ENST00000291547 IGLV5-52A0A0A0MRZ9 124 aa7.53□□□□□ -1.2
PKNOX1-201ENST00000291547 KIAA0087Q14695 138 aa7.53□□□□□ -1.2
PKNOX1-201ENST00000291547 Q8N2B8 174 aa7.53□□□□□ -1.2
PKNOX1-201ENST00000291547 Q5XG85 94 aa7.52□□□□□ -1.21
PKNOX1-201ENST00000291547 IGLV5-39A0A0G2JS06 123 aa7.51□□□□□ -1.21
PKNOX1-201ENST00000291547 ATP11AUNQ6ZP68 121 aa7.51□□□□□ -1.21
PKNOX1-201ENST00000291547 C7orf65Q6ZTY9 151 aa7.51□□□□□ -1.21
PKNOX1-201ENST00000291547 LYPD5Q6UWN5 251 aa7.51□□□□□ -1.21
PKNOX1-201ENST00000291547 VPREB1P12018 145 aa7.51□□□□□ -1.21
PKNOX1-201ENST00000291547 C22orf24Q9Y442 160 aa7.51□□□□□ -1.21
PKNOX1-201ENST00000291547 ACYP2P14621 99 aa7.5□□□□□ -1.21
PKNOX1-201ENST00000291547 KLKP1Q107X0 134 aa7.5□□□□□ -1.21
PKNOX1-201ENST00000291547 KIF25-AS1Q9Y6Z4 181 aa7.5□□□□□ -1.21
PKNOX1-201ENST00000291547 TP53AIP1Q9HCN2 124 aa7.49□□□□□ -1.21
PKNOX1-201ENST00000291547 ACANP16112 2415 aa7.48□□□□□ -1.21
PKNOX1-201ENST00000291547 IGHV3OR16-9A0A0B4J2B5 98 aa7.48□□□□□ -1.21
PKNOX1-201ENST00000291547 ERC2-IT1O76042 136 aa7.48□□□□□ -1.21
PKNOX1-201ENST00000291547 PRR15Q8IV56 129 aa7.48□□□□□ -1.21
PKNOX1-201ENST00000291547 FASNP49327 2511 aaKnown RBP7.48□□□□□ -1.21
PKNOX1-201ENST00000291547 C8orf87E5RJ46 101 aa7.47□□□□□ -1.21
PKNOX1-201ENST00000291547 FAM218AQ96MZ4 157 aa7.47□□□□□ -1.21
PKNOX1-201ENST00000291547 LAMA1P25391 3075 aa7.47□□□□□ -1.21
PKNOX1-201ENST00000291547 C6orf48Q9UBA6 75 aa7.46□□□□□ -1.21
PKNOX1-201ENST00000291547 FSHBP01225 129 aa7.45□□□□□ -1.22
PKNOX1-201ENST00000291547 MYO15AQ9UKN7 3530 aa7.45□□□□□ -1.22
PKNOX1-201ENST00000291547 AKAP13Q12802 2813 aa7.45□□□□□ -1.22
PKNOX1-201ENST00000291547 SMR3AQ99954 134 aa7.44□□□□□ -1.22
PKNOX1-201ENST00000291547 TM2D3Q9BRN9 247 aa7.44□□□□□ -1.22
PKNOX1-201ENST00000291547 MUC3AQ02505 3323 aa7.44□□□□□ -1.22
PKNOX1-201ENST00000291547 MTORP42345 2549 aa7.44□□□□□ -1.22
PKNOX1-201ENST00000291547 IGLV8-61A0A075B6I0 122 aa7.44□□□□□ -1.22
PKNOX1-201ENST00000291547 H7BZZ5 65 aa7.44□□□□□ -1.22
PKNOX1-201ENST00000291547 SPINT4Q6UDR6 99 aa7.44□□□□□ -1.22
PKNOX1-201ENST00000291547 WDFY4Q6ZS81 3184 aa7.43□□□□□ -1.22
PKNOX1-201ENST00000291547 PLA2G1BP04054 148 aaKnown RBP7.43□□□□□ -1.22
PKNOX1-201ENST00000291547 LINC00167Q96N53 147 aa7.43□□□□□ -1.22
PKNOX1-201ENST00000291547 H3BPC8 53 aa7.43□□□□□ -1.22
PKNOX1-201ENST00000291547 MGAQ8IWI9 3026 aa7.43□□□□□ -1.22
PKNOX1-201ENST00000291547 Q6ZQT0 140 aa7.42□□□□□ -1.22
PKNOX1-201ENST00000291547 SPACA4Q8TDM5 124 aa7.42□□□□□ -1.22
PKNOX1-201ENST00000291547 LITAFQ99732 161 aa7.42□□□□□ -1.22
PKNOX1-201ENST00000291547 POLQO75417 2590 aa7.42□□□□□ -1.22
PKNOX1-201ENST00000291547 TRAV22A0A0B4J277 110 aa7.42□□□□□ -1.22
PKNOX1-201ENST00000291547 MOBPQ13875 183 aa7.42□□□□□ -1.22
PKNOX1-201ENST00000291547 A0A1B0GW54 56 aa7.42□□□□□ -1.22
PKNOX1-201ENST00000291547 LINC00315P59091 139 aa7.42□□□□□ -1.22
PKNOX1-201ENST00000291547 Q8NBF4 154 aa7.42□□□□□ -1.22
PKNOX1-201ENST00000291547 C11orf72Q8NBR9 251 aa7.42□□□□□ -1.22
PKNOX1-201ENST00000291547 DNAH14Q0VDD8 3507 aa7.42□□□□□ -1.22
PKNOX1-201ENST00000291547 C1orf134Q5TEV5 83 aa7.41□□□□□ -1.22
PKNOX1-201ENST00000291547 VPS13AQ96RL7 3174 aa7.41□□□□□ -1.22
PKNOX1-201ENST00000291547 ANKRD17O75179 2603 aaKnown RBP7.4□□□□□ -1.22
PKNOX1-201ENST00000291547 KTN1-AS1Q86SY8 53 aa7.4□□□□□ -1.22
PKNOX1-201ENST00000291547 IGLV5-45A0A087WSX0 123 aa7.39□□□□□ -1.23
PKNOX1-201ENST00000291547 LOC110117498A0A087WWA1 95 aa7.39□□□□□ -1.23
PKNOX1-201ENST00000291547 ELOF1P60002 83 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms