RNA–Protein interactions for RNA: ENST00000288986.6

NCK1-201, Transcript of NCK adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCK1, Length 1,937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-201ENST00000288986 LINC00158P58513 81 aa9.98□□□□□ -0.81
NCK1-201ENST00000288986 LINC01620Q4KN68 170 aa9.98□□□□□ -0.81
NCK1-201ENST00000288986 UNQ6190/PRO20217Q6UXQ8 127 aa9.98□□□□□ -0.81
NCK1-201ENST00000288986 RAB37Q96AX2 223 aa9.98□□□□□ -0.81
NCK1-201ENST00000288986 DYNC1H1Q14204 4646 aaKnown RBP9.98□□□□□ -0.81
NCK1-201ENST00000288986 SLPIP03973 132 aa9.97□□□□□ -0.81
NCK1-201ENST00000288986 NPC2P61916 151 aa9.97□□□□□ -0.81
NCK1-201ENST00000288986 LRP1BQ9NZR2 4599 aa9.97□□□□□ -0.81
NCK1-201ENST00000288986 LOC107984156A0A0G2JMH3 177 aa9.97□□□□□ -0.81
NCK1-201ENST00000288986 PFN2P35080 140 aa9.97□□□□□ -0.81
NCK1-201ENST00000288986 ARL17AQ8IVW1 177 aa9.97□□□□□ -0.81
NCK1-201ENST00000288986 CNBPP62633 177 aaKnown RBP9.96□□□□□ -0.81
NCK1-201ENST00000288986 BIRC6Q9NR09 4857 aa9.96□□□□□ -0.82
NCK1-201ENST00000288986 TRBV30A0A0K0K1B3 111 aa9.95□□□□□ -0.82
NCK1-201ENST00000288986 C9orf116Q5BN46 136 aaPredicted RBP9.95□□□□□ -0.82
NCK1-201ENST00000288986 C6orf48Q9UBA6 75 aa9.95□□□□□ -0.82
NCK1-201ENST00000288986 PRO1854Q9UHT4 67 aa9.95□□□□□ -0.82
NCK1-201ENST00000288986 H3BUT2 72 aa9.94□□□□□ -0.82
NCK1-201ENST00000288986 KRTAP10-1P60331 282 aa9.94□□□□□ -0.82
NCK1-201ENST00000288986 C9orf163Q8N9P6 203 aa9.94□□□□□ -0.82
NCK1-201ENST00000288986 CAMK2N2Q96S95 79 aa9.93□□□□□ -0.82
NCK1-201ENST00000288986 TSPAN13O95857 204 aa9.92□□□□□ -0.82
NCK1-201ENST00000288986 Q6ZRU5 148 aa9.92□□□□□ -0.82
NCK1-201ENST00000288986 A0A1W2PPM0 123 aa9.92□□□□□ -0.82
NCK1-201ENST00000288986 SYCNQ0VAF6 134 aa9.92□□□□□ -0.82
NCK1-201ENST00000288986 NAA38Q9BRA0 125 aaKnown RBP9.92□□□□□ -0.82
NCK1-201ENST00000288986 CARD19Q96LW7 228 aa9.91□□□□□ -0.82
NCK1-201ENST00000288986 SND1-IT1Q9HBX3 110 aa9.9□□□□□ -0.82
NCK1-201ENST00000288986 IGKV2-28A0A075B6P5 120 aa9.88□□□□□ -0.83
NCK1-201ENST00000288986 IGKV2D-28P01615 120 aa9.88□□□□□ -0.83
NCK1-201ENST00000288986 RNF151Q2KHN1 245 aa9.88□□□□□ -0.83
NCK1-201ENST00000288986 SDIM1Q6ZPB5 146 aa9.88□□□□□ -0.83
NCK1-201ENST00000288986 FAM30AQ9NZY2 134 aa9.88□□□□□ -0.83
NCK1-201ENST00000288986 NDUFC2O95298 119 aa9.87□□□□□ -0.83
NCK1-201ENST00000288986 VAMP3Q15836 100 aa9.87□□□□□ -0.83
NCK1-201ENST00000288986 KIAA1109Q2LD37 5005 aa9.87□□□□□ -0.83
NCK1-201ENST00000288986 FABP2P12104 132 aa9.86□□□□□ -0.83
NCK1-201ENST00000288986 NDUFC2-KCTD14E9PQ53 114 aa9.85□□□□□ -0.83
NCK1-201ENST00000288986 TLX1NBP0CAT3 122 aa9.85□□□□□ -0.83
NCK1-201ENST00000288986 LINC00337Q8N6G1 96 aa9.85□□□□□ -0.83
NCK1-201ENST00000288986 TRAV13-2A0A0B4J235 113 aa9.84□□□□□ -0.83
NCK1-201ENST00000288986 CDK2AP2O75956 126 aa9.84□□□□□ -0.83
NCK1-201ENST00000288986 RPL13AP40429 203 aaKnown RBP9.84□□□□□ -0.83
NCK1-201ENST00000288986 DPH3Q96FX2 82 aa9.84□□□□□ -0.83
NCK1-201ENST00000288986 APOBP04114 4563 aaKnown RBP9.84□□□□□ -0.83
NCK1-201ENST00000288986 K7EP34 96 aa9.84□□□□□ -0.83
NCK1-201ENST00000288986 HAMPP81172 84 aa9.84□□□□□ -0.83
NCK1-201ENST00000288986 UBE2V1Q13404 147 aa9.84□□□□□ -0.83
NCK1-201ENST00000288986 Q8NDZ9 215 aa9.83□□□□□ -0.84
NCK1-201ENST00000288986 SPCS1Q9Y6A9 102 aa9.83□□□□□ -0.84
NCK1-201ENST00000288986 IGKV2-24A0A0C4DH68 120 aa9.82□□□□□ -0.84
NCK1-201ENST00000288986 Q6ZSA8 131 aa9.82□□□□□ -0.84
NCK1-201ENST00000288986 XGP55808 180 aa9.82□□□□□ -0.84
NCK1-201ENST00000288986 Q6ZRP5 223 aa9.82□□□□□ -0.84
NCK1-201ENST00000288986 PKIGQ9Y2B9 76 aa9.82□□□□□ -0.84
NCK1-201ENST00000288986 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.82□□□□□ -0.84
NCK1-201ENST00000288986 LOC107984640A0A0U1RRK4 108 aa9.81□□□□□ -0.84
NCK1-201ENST00000288986 GAGE10A6NGK3 116 aa9.81□□□□□ -0.84
NCK1-201ENST00000288986 H7C2G1 150 aa9.81□□□□□ -0.84
NCK1-201ENST00000288986 CHTF8P0CG12 524 aa9.81□□□□□ -0.84
NCK1-201ENST00000288986 LYRM7Q5U5X0 104 aa9.81□□□□□ -0.84
NCK1-201ENST00000288986 GTF2H5Q6ZYL4 71 aa9.81□□□□□ -0.84
NCK1-201ENST00000288986 DNAH8Q96JB1 4490 aa9.81□□□□□ -0.84
NCK1-201ENST00000288986 RYR1P21817 5038 aa9.8□□□□□ -0.84
NCK1-201ENST00000288986 PANO1I0J062 215 aa9.8□□□□□ -0.84
NCK1-201ENST00000288986 TRIAP1O43715 76 aa9.8□□□□□ -0.84
NCK1-201ENST00000288986 RPL18AQ02543 176 aaKnown RBP9.8□□□□□ -0.84
NCK1-201ENST00000288986 GAGE2BQ13066 116 aa9.8□□□□□ -0.84
NCK1-201ENST00000288986 Q1RN00 199 aa9.8□□□□□ -0.84
NCK1-201ENST00000288986 A0A096LNI7 61 aa9.8□□□□□ -0.84
NCK1-201ENST00000288986 XAGE1AQ9HD64 81 aa9.79□□□□□ -0.84
NCK1-201ENST00000288986 SCXQ7RTU7 201 aa9.78□□□□□ -0.84
NCK1-201ENST00000288986 TRBV10-2A0A0K0K1G8 114 aa9.78□□□□□ -0.84
NCK1-201ENST00000288986 PSMB2P49721 201 aa9.78□□□□□ -0.84
NCK1-201ENST00000288986 PRR3P79522 188 aaKnown RBP9.78□□□□□ -0.84
NCK1-201ENST00000288986 CIRBP-AS1Q8TBR5 109 aa9.78□□□□□ -0.84
NCK1-201ENST00000288986 LINC00474Q9P2X8 69 aa9.78□□□□□ -0.84
NCK1-201ENST00000288986 HSPG2P98160 4391 aa9.77□□□□□ -0.84
NCK1-201ENST00000288986 TRBV20-1A0A075B6N2 111 aa9.77□□□□□ -0.85
NCK1-201ENST00000288986 RPL28P46779 137 aaKnown RBP9.77□□□□□ -0.85
NCK1-201ENST00000288986 SPACA4Q8TDM5 124 aa9.77□□□□□ -0.85
NCK1-201ENST00000288986 VPREB1P12018 145 aa9.76□□□□□ -0.85
NCK1-201ENST00000288986 GAGE2EQ4V326 116 aa9.76□□□□□ -0.85
NCK1-201ENST00000288986 C9orf129Q5T035 196 aaKnown RBP9.76□□□□□ -0.85
NCK1-201ENST00000288986 GAGE2DQ9UEU5 116 aa9.76□□□□□ -0.85
NCK1-201ENST00000288986 TCL1BO95988 128 aa9.76□□□□□ -0.85
NCK1-201ENST00000288986 A0A087WYN8 130 aa9.75□□□□□ -0.85
NCK1-201ENST00000288986 SMIM11BQ8TCY0 68 aa9.75□□□□□ -0.85
NCK1-201ENST00000288986 SMR3BP02814 79 aaPredicted RBP9.74□□□□□ -0.85
NCK1-201ENST00000288986 COX6CP09669 75 aa9.74□□□□□ -0.85
NCK1-201ENST00000288986 SCGB1C2P0DMR2 95 aa9.74□□□□□ -0.85
NCK1-201ENST00000288986 TMEM126AQ9H061 195 aa9.74□□□□□ -0.85
NCK1-201ENST00000288986 NCR3O14931 201 aa9.74□□□□□ -0.85
NCK1-201ENST00000288986 PLA2G2DQ9UNK4 145 aa9.74□□□□□ -0.85
NCK1-201ENST00000288986 OR13C6PQ8NH95 151 aa9.73□□□□□ -0.85
NCK1-201ENST00000288986 H3BMG7 143 aa9.72□□□□□ -0.85
NCK1-201ENST00000288986 IGLV6-57P01721 117 aa9.72□□□□□ -0.85
NCK1-201ENST00000288986 IGLV5-37A0A075B6J1 123 aa9.7□□□□□ -0.86
NCK1-201ENST00000288986 PLAC8Q9NZF1 115 aa9.7□□□□□ -0.86
NCK1-201ENST00000288986 PRO0461Q9UI25 63 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms