RNA–Protein interactions for RNA: ENST00000288723.8

RAB28-201, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RAB28, Length 1,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-201ENST00000288723 A0A0U1RRA0 63 aa12.4□□□□□ -0.42
RAB28-201ENST00000288723 NKAPP1Q8N9T2 125 aa12.4□□□□□ -0.42
RAB28-201ENST00000288723 PMCHL2Q9BQD1 86 aa12.4□□□□□ -0.42
RAB28-201ENST00000288723 HIST1H2BKO60814 126 aa12.39□□□□□ -0.43
RAB28-201ENST00000288723 HIST1H2BJP06899 126 aa12.39□□□□□ -0.43
RAB28-201ENST00000288723 HIST1H2BOP23527 126 aa12.39□□□□□ -0.43
RAB28-201ENST00000288723 HIST1H2BBP33778 126 aa12.39□□□□□ -0.43
RAB28-201ENST00000288723 HIST1H2BDP58876 126 aa12.39□□□□□ -0.43
RAB28-201ENST00000288723 HIST1H2BCP62807 126 aa12.39□□□□□ -0.43
RAB28-201ENST00000288723 HIST2H2BEQ16778 126 aa12.39□□□□□ -0.43
RAB28-201ENST00000288723 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.39□□□□□ -0.43
RAB28-201ENST00000288723 SFTA2Q6UW10 78 aa12.39□□□□□ -0.43
RAB28-201ENST00000288723 HIST1H2BHQ93079 126 aa12.39□□□□□ -0.43
RAB28-201ENST00000288723 HIST1H2BNQ99877 126 aa12.39□□□□□ -0.43
RAB28-201ENST00000288723 HIST1H2BMQ99879 126 aa12.39□□□□□ -0.43
RAB28-201ENST00000288723 IGLV5-37A0A075B6J1 123 aa12.39□□□□□ -0.43
RAB28-201ENST00000288723 LINC00158P58513 81 aa12.38□□□□□ -0.43
RAB28-201ENST00000288723 Q8NDZ9 215 aa12.37□□□□□ -0.43
RAB28-201ENST00000288723 ZNF861PO60384 105 aa12.36□□□□□ -0.43
RAB28-201ENST00000288723 VPREB1P12018 145 aa12.36□□□□□ -0.43
RAB28-201ENST00000288723 IGKV2-28A0A075B6P5 120 aa12.34□□□□□ -0.43
RAB28-201ENST00000288723 IGKV2D-28P01615 120 aa12.34□□□□□ -0.43
RAB28-201ENST00000288723 PLNP26678 52 aa12.34□□□□□ -0.43
RAB28-201ENST00000288723 BCE1O60756 84 aa12.34□□□□□ -0.43
RAB28-201ENST00000288723 DPM2O94777 84 aa12.34□□□□□ -0.43
RAB28-201ENST00000288723 SMIM13P0DJ93 91 aa12.34□□□□□ -0.43
RAB28-201ENST00000288723 TSPEAR-AS2P59090 65 aa12.34□□□□□ -0.43
RAB28-201ENST00000288723 PRR26Q8N8Z3 221 aa12.34□□□□□ -0.43
RAB28-201ENST00000288723 NDUFA12Q9UI09 145 aa12.34□□□□□ -0.43
RAB28-201ENST00000288723 MAP1LC3CQ9BXW4 147 aa12.33□□□□□ -0.44
RAB28-201ENST00000288723 KRTAP1-4P0C5Y4 121 aa12.32□□□□□ -0.44
RAB28-201ENST00000288723 MEIG1Q5JSS6 88 aa12.32□□□□□ -0.44
RAB28-201ENST00000288723 IGKCP01834 107 aa12.32□□□□□ -0.44
RAB28-201ENST00000288723 RPL24P83731 157 aaKnown RBP12.32□□□□□ -0.44
RAB28-201ENST00000288723 LEPROTO15243 131 aa12.3□□□□□ -0.44
RAB28-201ENST00000288723 HERV-K104P63124 156 aa12.3□□□□□ -0.44
RAB28-201ENST00000288723 IGLV1-50A0A075B6I6 118 aa12.29□□□□□ -0.44
RAB28-201ENST00000288723 MYMXA0A1B0GTQ4 84 aa12.29□□□□□ -0.44
RAB28-201ENST00000288723 RPL28P46779 137 aaKnown RBP12.28□□□□□ -0.44
RAB28-201ENST00000288723 MIR7-3HGQ8N6C7 128 aa12.28□□□□□ -0.44
RAB28-201ENST00000288723 PLEKHB2Q96CS7 222 aa12.28□□□□□ -0.44
RAB28-201ENST00000288723 TMEM238C9JI98 176 aa12.27□□□□□ -0.45
RAB28-201ENST00000288723 J3QQQ9 107 aa12.27□□□□□ -0.45
RAB28-201ENST00000288723 HERVK_113P61574 105 aa12.27□□□□□ -0.45
RAB28-201ENST00000288723 SYS1-DBNDD2H3BUS1 97 aa12.26□□□□□ -0.45
RAB28-201ENST00000288723 UBE2AP49459 152 aa12.25□□□□□ -0.45
RAB28-201ENST00000288723 BOD1L2Q8IYS8 172 aa12.25□□□□□ -0.45
RAB28-201ENST00000288723 DAND5Q8N907 189 aa12.24□□□□□ -0.45
RAB28-201ENST00000288723 TMEM126AQ9H061 195 aa12.24□□□□□ -0.45
RAB28-201ENST00000288723 LGALS3P17931 250 aaKnown RBP12.23□□□□□ -0.45
RAB28-201ENST00000288723 S100A2P29034 98 aa12.23□□□□□ -0.45
RAB28-201ENST00000288723 KRTAP13-1Q8IUC0 172 aa12.23□□□□□ -0.45
RAB28-201ENST00000288723 M0R378 163 aa12.22□□□□□ -0.45
RAB28-201ENST00000288723 PRLHP81277 87 aa12.22□□□□□ -0.45
RAB28-201ENST00000288723 C14orf144Q96I85 54 aa12.21□□□□□ -0.45
RAB28-201ENST00000288723 NCR3O14931 201 aa12.21□□□□□ -0.46
RAB28-201ENST00000288723 FAM19A1Q7Z5A9 133 aa12.21□□□□□ -0.46
RAB28-201ENST00000288723 COA6Q5JTJ3 125 aaKnown RBP12.2□□□□□ -0.46
RAB28-201ENST00000288723 UBR4Q5T4S7 5183 aa12.2□□□□□ -0.46
RAB28-201ENST00000288723 NMUP48645 174 aa12.19□□□□□ -0.46
RAB28-201ENST00000288723 PYY3Q5JQD4 70 aa12.19□□□□□ -0.46
RAB28-201ENST00000288723 LINC01545Q5VT33 79 aa12.19□□□□□ -0.46
RAB28-201ENST00000288723 E9PLD3 99 aa12.18□□□□□ -0.46
RAB28-201ENST00000288723 C3orf79P0CE67 100 aa12.18□□□□□ -0.46
RAB28-201ENST00000288723 ANAPC11Q9NYG5 84 aa12.18□□□□□ -0.46
RAB28-201ENST00000288723 PET117Q6UWS5 81 aa12.18□□□□□ -0.46
RAB28-201ENST00000288723 A0A1B0GV90 55 aa12.16□□□□□ -0.46
RAB28-201ENST00000288723 TSTD3H0UI37 97 aa12.16□□□□□ -0.46
RAB28-201ENST00000288723 A0A087X002 238 aa12.16□□□□□ -0.46
RAB28-201ENST00000288723 RPL13AP40429 203 aaKnown RBP12.16□□□□□ -0.46
RAB28-201ENST00000288723 KRTDAPP60985 99 aa12.16□□□□□ -0.46
RAB28-201ENST00000288723 DDTP30046 118 aa12.15□□□□□ -0.46
RAB28-201ENST00000288723 A0A0J9YXY3 114 aa12.14□□□□□ -0.47
RAB28-201ENST00000288723 IGKV2D-26A0A0A0MRZ7 120 aa12.13□□□□□ -0.47
RAB28-201ENST00000288723 ADAMTSL4-AS1Q5T5F5 129 aa12.13□□□□□ -0.47
RAB28-201ENST00000288723 LOC107984156A0A0G2JMH3 177 aa12.12□□□□□ -0.47
RAB28-201ENST00000288723 TRBV10-3A0A0K0K1G6 114 aa12.12□□□□□ -0.47
RAB28-201ENST00000288723 NPC2P61916 151 aa12.12□□□□□ -0.47
RAB28-201ENST00000288723 ARL17AQ8IVW1 177 aa12.12□□□□□ -0.47
RAB28-201ENST00000288723 LRP2P98164 4655 aa12.12□□□□□ -0.47
RAB28-201ENST00000288723 CRYGAP11844 174 aa12.11□□□□□ -0.47
RAB28-201ENST00000288723 HIGD2AQ9BW72 106 aa12.11□□□□□ -0.47
RAB28-201ENST00000288723 EIF4EBP3O60516 100 aaPredicted RBP12.1□□□□□ -0.47
RAB28-201ENST00000288723 MIEN1Q9BRT3 115 aa12.1□□□□□ -0.47
RAB28-201ENST00000288723 TTTY13Q9BZ97 58 aa12.1□□□□□ -0.47
RAB28-201ENST00000288723 SOSTDC1Q6X4U4 206 aa12.09□□□□□ -0.47
RAB28-201ENST00000288723 KCNQ1DNQ9H478 68 aa12.09□□□□□ -0.47
RAB28-201ENST00000288723 PRYO14603 147 aa12.09□□□□□ -0.47
RAB28-201ENST00000288723 HIST3H2BBQ8N257 126 aa12.09□□□□□ -0.47
RAB28-201ENST00000288723 TYMSOSQ8TAI1 123 aa12.07□□□□□ -0.48
RAB28-201ENST00000288723 KRTAP13-2Q52LG2 175 aa12.07□□□□□ -0.48
RAB28-201ENST00000288723 SPRR1AP35321 89 aa12.06□□□□□ -0.48
RAB28-201ENST00000288723 ZNF815PA8K554 130 aa12.05□□□□□ -0.48
RAB28-201ENST00000288723 ATOH7Q8N100 152 aa12.05□□□□□ -0.48
RAB28-201ENST00000288723 LITAFQ99732 161 aa12.05□□□□□ -0.48
RAB28-201ENST00000288723 TRBV10-2A0A0K0K1G8 114 aa12.04□□□□□ -0.48
RAB28-201ENST00000288723 LINC00337Q8N6G1 96 aa12.04□□□□□ -0.48
RAB28-201ENST00000288723 SPANXB1Q9NS25 103 aaPredicted RBP12.04□□□□□ -0.48
RAB28-201ENST00000288723 KRTAP4-16G5E9R7 235 aaPredicted RBP12.04□□□□□ -0.48
RAB28-201ENST00000288723 CBY1Q9Y3M2 126 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms