RNA–Protein interactions for RNA: ENST00000269217.10

LAMA3-201, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene LAMA3, Length 5,671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-201ENST00000269217 A0A1B0GW54 56 aa7.05□□□□□ -1.28
LAMA3-201ENST00000269217 COL27A1Q8IZC6 1860 aaPredicted RBP7.04□□□□□ -1.28
LAMA3-201ENST00000269217 FN1P02751 2386 aaKnown RBP7.04□□□□□ -1.28
LAMA3-201ENST00000269217 Q9UF83 564 aa7.04□□□□□ -1.28
LAMA3-201ENST00000269217 X6R8D5 127 aa7.04□□□□□ -1.28
LAMA3-201ENST00000269217 SMIM29Q86T20 159 aa7.03□□□□□ -1.28
LAMA3-201ENST00000269217 LINC00167Q96N53 147 aa7.03□□□□□ -1.28
LAMA3-201ENST00000269217 ELOF1P60002 83 aaKnown RBP7.03□□□□□ -1.28
LAMA3-201ENST00000269217 C1orf64Q8NEQ6 169 aa7.03□□□□□ -1.28
LAMA3-201ENST00000269217 DNAH12Q6ZR08 3092 aa7.03□□□□□ -1.28
LAMA3-201ENST00000269217 NHLRC4P0CG21 123 aaPredicted RBP7.03□□□□□ -1.28
LAMA3-201ENST00000269217 RETNLBQ9BQ08 111 aa7.03□□□□□ -1.28
LAMA3-201ENST00000269217 LRRK2Q5S007 2527 aa7.02□□□□□ -1.29
LAMA3-201ENST00000269217 LIMD2Q9BT23 127 aa7.02□□□□□ -1.29
LAMA3-201ENST00000269217 ZFYVE26Q68DK2 2539 aa7.02□□□□□ -1.29
LAMA3-201ENST00000269217 ANKRD11Q6UB99 2663 aaPredicted RBP7.01□□□□□ -1.29
LAMA3-201ENST00000269217 LOC110117498A0A087WWA1 95 aa7.01□□□□□ -1.29
LAMA3-201ENST00000269217 Q6ZQT0 140 aa7.01□□□□□ -1.29
LAMA3-201ENST00000269217 USP9YO00507 2555 aaPredicted RBP7□□□□□ -1.29
LAMA3-201ENST00000269217 SPTBN4Q9H254 2564 aa7□□□□□ -1.29
LAMA3-201ENST00000269217 TP53AIP1Q9HCN2 124 aa6.99□□□□□ -1.29
LAMA3-201ENST00000269217 LITAFQ99732 161 aa6.98□□□□□ -1.29
LAMA3-201ENST00000269217 SPINK1P00995 79 aa6.98□□□□□ -1.29
LAMA3-201ENST00000269217 Q6ZRX8 168 aa6.98□□□□□ -1.29
LAMA3-201ENST00000269217 CHD8Q9HCK8 2581 aa6.98□□□□□ -1.29
LAMA3-201ENST00000269217 SETD2Q9BYW2 2564 aaPredicted RBP6.97□□□□□ -1.29
LAMA3-201ENST00000269217 Q8NBF4 154 aa6.97□□□□□ -1.29
LAMA3-201ENST00000269217 PCSK5Q92824 1860 aa6.97□□□□□ -1.29
LAMA3-201ENST00000269217 RPS28P62857 69 aaKnown RBP6.96□□□□□ -1.29
LAMA3-201ENST00000269217 MDFIQ99750 246 aa6.96□□□□□ -1.29
LAMA3-201ENST00000269217 FSHBP01225 129 aa6.96□□□□□ -1.3
LAMA3-201ENST00000269217 Q8NAQ8 132 aa6.95□□□□□ -1.3
LAMA3-201ENST00000269217 GVQW2A0A096LPI5 108 aaPredicted RBP6.95□□□□□ -1.3
LAMA3-201ENST00000269217 MUC4Q99102 2169 aa6.95□□□□□ -1.3
LAMA3-201ENST00000269217 LINC00476Q8WZB0 136 aa6.95□□□□□ -1.3
LAMA3-201ENST00000269217 MOBPQ13875 183 aa6.94□□□□□ -1.3
LAMA3-201ENST00000269217 H3BPC8 53 aa6.94□□□□□ -1.3
LAMA3-201ENST00000269217 PKD1L2Q7Z442 2459 aa6.94□□□□□ -1.3
LAMA3-201ENST00000269217 PRO0628Q9UI54 55 aa6.94□□□□□ -1.3
LAMA3-201ENST00000269217 IGKV2D-30A0A075B6S6 120 aa6.93□□□□□ -1.3
LAMA3-201ENST00000269217 IGKV2-30P06310 120 aa6.93□□□□□ -1.3
LAMA3-201ENST00000269217 PRRC2CQ9Y520 2896 aaKnown RBP6.92□□□□□ -1.3
LAMA3-201ENST00000269217 C16orf90A8MZG2 172 aa6.92□□□□□ -1.3
LAMA3-201ENST00000269217 IGLV6-57P01721 117 aa6.91□□□□□ -1.3
LAMA3-201ENST00000269217 PHF5AQ7RTV0 110 aaKnown RBP6.91□□□□□ -1.3
LAMA3-201ENST00000269217 ACYP2P14621 99 aa6.91□□□□□ -1.3
LAMA3-201ENST00000269217 EPM2AB3EWF7 344 aa6.9□□□□□ -1.3
LAMA3-201ENST00000269217 VPREB1P12018 145 aa6.9□□□□□ -1.31
LAMA3-201ENST00000269217 C7orf65Q6ZTY9 151 aa6.9□□□□□ -1.31
LAMA3-201ENST00000269217 ST20-AS1Q8NBB2 130 aa6.9□□□□□ -1.31
LAMA3-201ENST00000269217 TM2D3Q9BRN9 247 aa6.9□□□□□ -1.31
LAMA3-201ENST00000269217 LINC00588Q9Y4M8 146 aa6.9□□□□□ -1.31
LAMA3-201ENST00000269217 A0A1B0GU69 56 aa6.89□□□□□ -1.31
LAMA3-201ENST00000269217 TRAV22A0A0B4J277 110 aa6.89□□□□□ -1.31
LAMA3-201ENST00000269217 SPACA4Q8TDM5 124 aa6.89□□□□□ -1.31
LAMA3-201ENST00000269217 Q6ZRP5 223 aa6.88□□□□□ -1.31
LAMA3-201ENST00000269217 TRBV7-4A0A0J9YYF1 115 aa6.88□□□□□ -1.31
LAMA3-201ENST00000269217 KRTAP24-1Q3LI83 254 aa6.88□□□□□ -1.31
LAMA3-201ENST00000269217 NBDYA0A0U1RRE5 68 aa6.87□□□□□ -1.31
LAMA3-201ENST00000269217 DNAH10OSP0CZ25 163 aa6.87□□□□□ -1.31
LAMA3-201ENST00000269217 C4orf26Q17RF5 130 aa6.87□□□□□ -1.31
LAMA3-201ENST00000269217 ZNF462Q96JM2 2506 aa6.87□□□□□ -1.31
LAMA3-201ENST00000269217 CSNK1G2-AS1Q8NCQ2 148 aa6.86□□□□□ -1.31
LAMA3-201ENST00000269217 RTL8CO15255 209 aa6.86□□□□□ -1.31
LAMA3-201ENST00000269217 MTORP42345 2549 aa6.86□□□□□ -1.31
LAMA3-201ENST00000269217 ERC2-IT1O76042 136 aa6.84□□□□□ -1.31
LAMA3-201ENST00000269217 FASNP49327 2511 aaKnown RBP6.84□□□□□ -1.31
LAMA3-201ENST00000269217 SPAG11AQ6PDA7 123 aa6.84□□□□□ -1.31
LAMA3-201ENST00000269217 ANKRD17O75179 2603 aaKnown RBP6.84□□□□□ -1.31
LAMA3-201ENST00000269217 LINC00313P59037 77 aa6.84□□□□□ -1.31
LAMA3-201ENST00000269217 RPL37AP61513 92 aaKnown RBP6.84□□□□□ -1.31
LAMA3-201ENST00000269217 KCNQ1DNQ9H478 68 aa6.83□□□□□ -1.32
LAMA3-201ENST00000269217 RANBP2P49792 3224 aaKnown RBP6.83□□□□□ -1.32
LAMA3-201ENST00000269217 EIF4EBP3O60516 100 aaPredicted RBP6.82□□□□□ -1.32
LAMA3-201ENST00000269217 LINC00528Q8N1L1 170 aa6.82□□□□□ -1.32
LAMA3-201ENST00000269217 IGLV1-50A0A075B6I6 118 aa6.82□□□□□ -1.32
LAMA3-201ENST00000269217 A8MWP4 228 aa6.82□□□□□ -1.32
LAMA3-201ENST00000269217 CHTF8P0CG12 524 aa6.82□□□□□ -1.32
LAMA3-201ENST00000269217 SERTAD4-AS1Q5TG53 156 aa6.81□□□□□ -1.32
LAMA3-201ENST00000269217 FAM168BA1KXE4 195 aa6.81□□□□□ -1.32
LAMA3-201ENST00000269217 PRR34Q9NV39 138 aa6.81□□□□□ -1.32
LAMA3-201ENST00000269217 A0A0C4DFX4 3053 aa6.8□□□□□ -1.32
LAMA3-201ENST00000269217 LOC101927531A0A1B0GV80 90 aa6.8□□□□□ -1.32
LAMA3-201ENST00000269217 K7EQZ3 153 aa6.8□□□□□ -1.32
LAMA3-201ENST00000269217 TYMSOSQ8TAI1 123 aa6.79□□□□□ -1.32
LAMA3-201ENST00000269217 POLQO75417 2590 aa6.79□□□□□ -1.32
LAMA3-201ENST00000269217 C8orf87E5RJ46 101 aa6.79□□□□□ -1.32
LAMA3-201ENST00000269217 EPG5Q9HCE0 2579 aa6.78□□□□□ -1.32
LAMA3-201ENST00000269217 A0A096LNT2 108 aa6.77□□□□□ -1.33
LAMA3-201ENST00000269217 LINC00612Q8N6U2 182 aa6.77□□□□□ -1.33
LAMA3-201ENST00000269217 MRPL34Q9BQ48 92 aaKnown RBP6.77□□□□□ -1.33
LAMA3-201ENST00000269217 GIG44P09565 113 aaPredicted RBP6.77□□□□□ -1.33
LAMA3-201ENST00000269217 FAM229AH3BQW9 127 aa6.76□□□□□ -1.33
LAMA3-201ENST00000269217 C15orf56Q8N910 161 aa6.76□□□□□ -1.33
LAMA3-201ENST00000269217 C19orf73Q9NVV2 129 aa6.76□□□□□ -1.33
LAMA3-201ENST00000269217 ATP11AUNQ6ZP68 121 aa6.75□□□□□ -1.33
LAMA3-201ENST00000269217 ACANP16112 2415 aa6.75□□□□□ -1.33
LAMA3-201ENST00000269217 IGFL1Q6UW32 110 aa6.75□□□□□ -1.33
LAMA3-201ENST00000269217 KLKP1Q107X0 134 aa6.74□□□□□ -1.33
LAMA3-201ENST00000269217 Q8N377 158 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms