RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 ENHOQ6UWT2 76 aa9.88□□□□□ -0.83
PDLIM2-201ENST00000265810 FAM19A1Q7Z5A9 133 aa9.88□□□□□ -0.83
PDLIM2-201ENST00000265810 HAMPP81172 84 aa9.88□□□□□ -0.83
PDLIM2-201ENST00000265810 UBL5Q9BZL1 73 aa9.88□□□□□ -0.83
PDLIM2-201ENST00000265810 KMT2BQ9UMN6 2715 aaPredicted RBP9.87□□□□□ -0.83
PDLIM2-201ENST00000265810 C2orf48Q96LS8 159 aa9.87□□□□□ -0.83
PDLIM2-201ENST00000265810 FBN2P35556 2912 aa9.87□□□□□ -0.83
PDLIM2-201ENST00000265810 NDUFC2-KCTD14E9PQ53 114 aa9.87□□□□□ -0.83
PDLIM2-201ENST00000265810 TMEM256-PLSCR3K7ERE1 68 aa9.87□□□□□ -0.83
PDLIM2-201ENST00000265810 FOXI1Q12951 378 aa9.86□□□□□ -0.83
PDLIM2-201ENST00000265810 NIPBLQ6KC79 2804 aaeCLIP9.84□□□□□ -0.83
PDLIM2-201ENST00000265810 C1orf134Q5TEV5 83 aa9.84□□□□□ -0.83
PDLIM2-201ENST00000265810 SS18L2Q9UHA2 77 aa9.83□□□□□ -0.84
PDLIM2-201ENST00000265810 JMJD7-PLA2G4BH0Y9G9 81 aa9.83□□□□□ -0.84
PDLIM2-201ENST00000265810 TRACP01848 142 aa9.83□□□□□ -0.84
PDLIM2-201ENST00000265810 TRBV10-3A0A0K0K1G6 114 aa9.83□□□□□ -0.84
PDLIM2-201ENST00000265810 TENM4Q6N022 2769 aa9.83□□□□□ -0.84
PDLIM2-201ENST00000265810 NBEAL1Q6ZS30 2694 aa9.83□□□□□ -0.84
PDLIM2-201ENST00000265810 ZNF73O43830 326 aaPredicted RBP9.83□□□□□ -0.84
PDLIM2-201ENST00000265810 RBM3P98179 157 aaKnown RBP9.83□□□□□ -0.84
PDLIM2-201ENST00000265810 C10orf25Q5T742 122 aa9.82□□□□□ -0.84
PDLIM2-201ENST00000265810 CDK2AP2O75956 126 aa9.82□□□□□ -0.84
PDLIM2-201ENST00000265810 H3BQ85 93 aa9.81□□□□□ -0.84
PDLIM2-201ENST00000265810 LST1O00453 97 aa9.81□□□□□ -0.84
PDLIM2-201ENST00000265810 C14orf132Q9NPU4 83 aa9.81□□□□□ -0.84
PDLIM2-201ENST00000265810 FUSP35637 526 aaKnown RBP eCLIP9.81□□□□□ -0.84
PDLIM2-201ENST00000265810 Q6ZQY7 126 aa9.81□□□□□ -0.84
PDLIM2-201ENST00000265810 TEX49A0A1B0GTD5 131 aa9.8□□□□□ -0.84
PDLIM2-201ENST00000265810 DNAH10OSP0CZ25 163 aa9.8□□□□□ -0.84
PDLIM2-201ENST00000265810 F8WDY8 70 aa9.8□□□□□ -0.84
PDLIM2-201ENST00000265810 M0QXV9 152 aa9.79□□□□□ -0.84
PDLIM2-201ENST00000265810 LINC00474Q9P2X8 69 aa9.79□□□□□ -0.84
PDLIM2-201ENST00000265810 C6orf48Q9UBA6 75 aa9.79□□□□□ -0.84
PDLIM2-201ENST00000265810 MXRA5Q9NR99 2828 aa9.79□□□□□ -0.84
PDLIM2-201ENST00000265810 A0A096LNI7 61 aa9.78□□□□□ -0.84
PDLIM2-201ENST00000265810 LINC00337Q8N6G1 96 aa9.78□□□□□ -0.84
PDLIM2-201ENST00000265810 IGLV5-52A0A0A0MRZ9 124 aa9.78□□□□□ -0.84
PDLIM2-201ENST00000265810 NBDYA0A0U1RRE5 68 aa9.78□□□□□ -0.84
PDLIM2-201ENST00000265810 RPL28P46779 137 aaKnown RBP9.78□□□□□ -0.84
PDLIM2-201ENST00000265810 NDUFC2O95298 119 aa9.77□□□□□ -0.84
PDLIM2-201ENST00000265810 WWC2-AS2Q96NR7 200 aa9.77□□□□□ -0.85
PDLIM2-201ENST00000265810 B5MCH6 92 aa9.76□□□□□ -0.85
PDLIM2-201ENST00000265810 SOSTDC1Q6X4U4 206 aa9.76□□□□□ -0.85
PDLIM2-201ENST00000265810 LRCOL1A6NCL2 159 aa9.76□□□□□ -0.85
PDLIM2-201ENST00000265810 ACYP1P07311 99 aa9.76□□□□□ -0.85
PDLIM2-201ENST00000265810 C7orf33Q8WU49 177 aa9.75□□□□□ -0.85
PDLIM2-201ENST00000265810 C9orf153Q5TBE3 101 aa9.74□□□□□ -0.85
PDLIM2-201ENST00000265810 PRR34Q9NV39 138 aa9.74□□□□□ -0.85
PDLIM2-201ENST00000265810 PPDPFQ9H3Y8 114 aa9.73□□□□□ -0.85
PDLIM2-201ENST00000265810 FAM19A3Q7Z5A8 133 aa9.73□□□□□ -0.85
PDLIM2-201ENST00000265810 SMIM20Q8N5G0 67 aa9.73□□□□□ -0.85
PDLIM2-201ENST00000265810 DHRS4-AS1Q9P1J3 65 aa9.72□□□□□ -0.85
PDLIM2-201ENST00000265810 NREPQ16612 68 aa9.71□□□□□ -0.86
PDLIM2-201ENST00000265810 MRPL55Q7Z7F7 128 aaKnown RBP9.71□□□□□ -0.86
PDLIM2-201ENST00000265810 A0A087WYN8 130 aa9.71□□□□□ -0.86
PDLIM2-201ENST00000265810 IGKV3D-7A0A0C4DH55 119 aa9.7□□□□□ -0.86
PDLIM2-201ENST00000265810 PDE6GP18545 87 aa9.69□□□□□ -0.86
PDLIM2-201ENST00000265810 LITAFQ99732 161 aa9.69□□□□□ -0.86
PDLIM2-201ENST00000265810 REG3GQ6UW15 175 aa9.68□□□□□ -0.86
PDLIM2-201ENST00000265810 Q8N814 137 aa9.68□□□□□ -0.86
PDLIM2-201ENST00000265810 C22orf24Q9Y442 160 aa9.68□□□□□ -0.86
PDLIM2-201ENST00000265810 GVQW2A0A096LPI5 108 aaPredicted RBP9.68□□□□□ -0.86
PDLIM2-201ENST00000265810 A0A1B0GX51 115 aa9.68□□□□□ -0.86
PDLIM2-201ENST00000265810 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.67□□□□□ -0.86
PDLIM2-201ENST00000265810 KIAA0087Q14695 138 aa9.65□□□□□ -0.86
PDLIM2-201ENST00000265810 APLNQ9ULZ1 77 aa9.65□□□□□ -0.86
PDLIM2-201ENST00000265810 EIF4EBP3O60516 100 aaPredicted RBP9.65□□□□□ -0.87
PDLIM2-201ENST00000265810 MT-ATP8P03928 68 aa9.64□□□□□ -0.87
PDLIM2-201ENST00000265810 CCKP06307 115 aa9.64□□□□□ -0.87
PDLIM2-201ENST00000265810 C4orf48Q5BLP8 95 aa9.64□□□□□ -0.87
PDLIM2-201ENST00000265810 SPENQ96T58 3664 aaKnown RBP9.64□□□□□ -0.87
PDLIM2-201ENST00000265810 BSNQ9UPA5 3926 aa9.63□□□□□ -0.87
PDLIM2-201ENST00000265810 Q6ZRP5 223 aa9.63□□□□□ -0.87
PDLIM2-201ENST00000265810 PDZD2O15018 2839 aa9.63□□□□□ -0.87
PDLIM2-201ENST00000265810 FAM104AQ969W3 186 aa9.63□□□□□ -0.87
PDLIM2-201ENST00000265810 LINC00167Q96N53 147 aa9.62□□□□□ -0.87
PDLIM2-201ENST00000265810 C15orf56Q8N910 161 aa9.62□□□□□ -0.87
PDLIM2-201ENST00000265810 NDUFV3P56181 108 aaKnown RBP9.61□□□□□ -0.87
PDLIM2-201ENST00000265810 PRYO14603 147 aa9.61□□□□□ -0.87
PDLIM2-201ENST00000265810 LINC00575Q6W349 94 aa9.61□□□□□ -0.87
PDLIM2-201ENST00000265810 PRLHP81277 87 aa9.6□□□□□ -0.87
PDLIM2-201ENST00000265810 UPK3BQ9BT76 320 aa9.6□□□□□ -0.87
PDLIM2-201ENST00000265810 C3orf84H3BNL1 204 aa9.59□□□□□ -0.87
PDLIM2-201ENST00000265810 CHTF8P0CG12 524 aa9.59□□□□□ -0.87
PDLIM2-201ENST00000265810 C1orf137Q5JT78 98 aa9.59□□□□□ -0.87
PDLIM2-201ENST00000265810 CASC10Q5T4H9 136 aa9.59□□□□□ -0.87
PDLIM2-201ENST00000265810 RTL8CO15255 209 aa9.58□□□□□ -0.88
PDLIM2-201ENST00000265810 LINC00643Q86TS7 51 aa9.58□□□□□ -0.88
PDLIM2-201ENST00000265810 IGLV9-49A0A0B4J1Y8 123 aa9.58□□□□□ -0.88
PDLIM2-201ENST00000265810 ZNF706Q9Y5V0 76 aaPredicted RBP9.57□□□□□ -0.88
PDLIM2-201ENST00000265810 CELSR1Q9NYQ6 3014 aa9.56□□□□□ -0.88
PDLIM2-201ENST00000265810 C16orf90A8MZG2 172 aa9.56□□□□□ -0.88
PDLIM2-201ENST00000265810 NDUFB1O75438 58 aa9.56□□□□□ -0.88
PDLIM2-201ENST00000265810 XGP55808 180 aa9.56□□□□□ -0.88
PDLIM2-201ENST00000265810 FAM218AQ96MZ4 157 aa9.55□□□□□ -0.88
PDLIM2-201ENST00000265810 BPY2O14599 106 aa9.55□□□□□ -0.88
PDLIM2-201ENST00000265810 SCXQ7RTU7 201 aa9.55□□□□□ -0.88
PDLIM2-201ENST00000265810 FAM168BA1KXE4 195 aa9.55□□□□□ -0.88
PDLIM2-201ENST00000265810 PHF5AQ7RTV0 110 aaKnown RBP9.55□□□□□ -0.88
PDLIM2-201ENST00000265810 NBPF19A0A087WUL8 3843 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms