RNA–Protein interactions for RNA: ENST00000264107.11

ITGA6-201, Transcript of integrin subunit alpha 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGA6, Length 5,618 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-201ENST00000264107 NAV2Q8IVL1 2488 aa12.46□□□□□ -0.41
ITGA6-201ENST00000264107 CIRBP-AS1Q8TBR5 109 aa12.45□□□□□ -0.42
ITGA6-201ENST00000264107 PRLHP81277 87 aa12.44□□□□□ -0.42
ITGA6-201ENST00000264107 EIF4EBP3O60516 100 aaPredicted RBP12.44□□□□□ -0.42
ITGA6-201ENST00000264107 CCDC168Q8NDH2 2452 aa12.44□□□□□ -0.42
ITGA6-201ENST00000264107 MYO18BQ8IUG5 2567 aa12.44□□□□□ -0.42
ITGA6-201ENST00000264107 IGLV8-61A0A075B6I0 122 aa12.43□□□□□ -0.42
ITGA6-201ENST00000264107 TRBV7-4A0A0J9YYF1 115 aa12.43□□□□□ -0.42
ITGA6-201ENST00000264107 WDR87Q6ZQQ6 2873 aa12.42□□□□□ -0.42
ITGA6-201ENST00000264107 PLA2G2AP14555 144 aa12.42□□□□□ -0.42
ITGA6-201ENST00000264107 PTPRSQ13332 1948 aa12.42□□□□□ -0.42
ITGA6-201ENST00000264107 Q5XG85 94 aa12.41□□□□□ -0.42
ITGA6-201ENST00000264107 C7orf33Q8WU49 177 aa12.41□□□□□ -0.42
ITGA6-201ENST00000264107 CDSNQ15517 529 aa12.4□□□□□ -0.42
ITGA6-201ENST00000264107 RBM12B-AS1Q9P1G2 102 aa12.39□□□□□ -0.43
ITGA6-201ENST00000264107 IGKV2D-30A0A075B6S6 120 aa12.39□□□□□ -0.43
ITGA6-201ENST00000264107 IGKV2-30P06310 120 aa12.39□□□□□ -0.43
ITGA6-201ENST00000264107 K7EQZ3 153 aa12.38□□□□□ -0.43
ITGA6-201ENST00000264107 HIVEP3Q5T1R4 2406 aa12.38□□□□□ -0.43
ITGA6-201ENST00000264107 C22orf24Q9Y442 160 aa12.38□□□□□ -0.43
ITGA6-201ENST00000264107 RPL37AP61513 92 aaKnown RBP12.37□□□□□ -0.43
ITGA6-201ENST00000264107 TLN1Q9Y490 2541 aaKnown RBP12.37□□□□□ -0.43
ITGA6-201ENST00000264107 H3BS24 57 aa12.37□□□□□ -0.43
ITGA6-201ENST00000264107 LINC00476Q8WZB0 136 aa12.36□□□□□ -0.43
ITGA6-201ENST00000264107 SSBP3-AS1Q7Z2R9 100 aa12.36□□□□□ -0.43
ITGA6-201ENST00000264107 UQCR11O14957 56 aa12.35□□□□□ -0.43
ITGA6-201ENST00000264107 ZNF462Q96JM2 2506 aa12.35□□□□□ -0.43
ITGA6-201ENST00000264107 LY6G6DO95868 133 aa12.34□□□□□ -0.43
ITGA6-201ENST00000264107 LINC01600Q96MT4 127 aa12.32□□□□□ -0.44
ITGA6-201ENST00000264107 AVPP01185 164 aa12.32□□□□□ -0.44
ITGA6-201ENST00000264107 C9orf129Q5T035 196 aaKnown RBP12.31□□□□□ -0.44
ITGA6-201ENST00000264107 CDC42SE1Q9NRR8 79 aa12.31□□□□□ -0.44
ITGA6-201ENST00000264107 RAI1Q7Z5J4 1906 aaPredicted RBP12.31□□□□□ -0.44
ITGA6-201ENST00000264107 MUC4Q99102 2169 aa12.3□□□□□ -0.44
ITGA6-201ENST00000264107 ABCA2Q9BZC7 2435 aa12.3□□□□□ -0.44
ITGA6-201ENST00000264107 LYPD5Q6UWN5 251 aa12.3□□□□□ -0.44
ITGA6-201ENST00000264107 MIR22HGQ0VDD5 57 aa12.29□□□□□ -0.44
ITGA6-201ENST00000264107 LINC00167Q96N53 147 aa12.29□□□□□ -0.44
ITGA6-201ENST00000264107 IGLV1-51P01701 117 aa12.29□□□□□ -0.44
ITGA6-201ENST00000264107 MYO9AB2RTY4 2548 aa12.29□□□□□ -0.44
ITGA6-201ENST00000264107 Q1T7F1 81 aa12.29□□□□□ -0.44
ITGA6-201ENST00000264107 Q6ZRX8 168 aa12.29□□□□□ -0.44
ITGA6-201ENST00000264107 ST20-AS1Q8NBB2 130 aa12.27□□□□□ -0.44
ITGA6-201ENST00000264107 IGLV6-57P01721 117 aa12.26□□□□□ -0.45
ITGA6-201ENST00000264107 GOLGB1Q14789 3259 aaKnown RBP12.26□□□□□ -0.45
ITGA6-201ENST00000264107 LINC01556Q5JQF7 62 aa12.25□□□□□ -0.45
ITGA6-201ENST00000264107 CENPFP49454 3210 aa12.23□□□□□ -0.45
ITGA6-201ENST00000264107 A8MWP4 228 aa12.22□□□□□ -0.45
ITGA6-201ENST00000264107 M0R2N4 97 aa12.21□□□□□ -0.46
ITGA6-201ENST00000264107 INAFM1C9JVW0 142 aa12.21□□□□□ -0.46
ITGA6-201ENST00000264107 FP248Q71RG6 208 aaPredicted RBP12.19□□□□□ -0.46
ITGA6-201ENST00000264107 MOBPQ13875 183 aa12.19□□□□□ -0.46
ITGA6-201ENST00000264107 CYSTM1Q9H1C7 97 aa12.19□□□□□ -0.46
ITGA6-201ENST00000264107 CEP295Q9C0D2 2601 aa12.15□□□□□ -0.46
ITGA6-201ENST00000264107 SPANXA2-OT1Q8N9U9 137 aa12.13□□□□□ -0.47
ITGA6-201ENST00000264107 OBSCN-AS1Q96MR7 158 aa12.12□□□□□ -0.47
ITGA6-201ENST00000264107 FAM229BQ4G0N7 80 aa12.12□□□□□ -0.47
ITGA6-201ENST00000264107 LINC01554Q52M75 96 aa12.11□□□□□ -0.47
ITGA6-201ENST00000264107 LINC00528Q8N1L1 170 aa12.1□□□□□ -0.47
ITGA6-201ENST00000264107 GVQW2A0A096LPI5 108 aaPredicted RBP12.1□□□□□ -0.47
ITGA6-201ENST00000264107 DOPEY1Q5JWR5 2465 aa12.1□□□□□ -0.47
ITGA6-201ENST00000264107 MRPL34Q9BQ48 92 aaKnown RBP12.09□□□□□ -0.47
ITGA6-201ENST00000264107 FN1P02751 2386 aaKnown RBP12.09□□□□□ -0.47
ITGA6-201ENST00000264107 A0A1W2PPR1 153 aa12.09□□□□□ -0.47
ITGA6-201ENST00000264107 OCR1Q9BZK8 76 aa12.07□□□□□ -0.48
ITGA6-201ENST00000264107 ANKRD11Q6UB99 2663 aaPredicted RBP12.06□□□□□ -0.48
ITGA6-201ENST00000264107 OXTP01178 125 aa12.05□□□□□ -0.48
ITGA6-201ENST00000264107 USP9XQ93008 2570 aaPredicted RBP12.04□□□□□ -0.48
ITGA6-201ENST00000264107 LINC00313P59037 77 aa12.04□□□□□ -0.48
ITGA6-201ENST00000264107 EPM2AB3EWF7 344 aa12.04□□□□□ -0.48
ITGA6-201ENST00000264107 TLN2Q9Y4G6 2542 aa12.04□□□□□ -0.48
ITGA6-201ENST00000264107 KRTAP10-9P60411 292 aa12.03□□□□□ -0.48
ITGA6-201ENST00000264107 Q6ZRP5 223 aa12.02□□□□□ -0.48
ITGA6-201ENST00000264107 CRIPTQ9P021 101 aa12.02□□□□□ -0.48
ITGA6-201ENST00000264107 IGFL1Q6UW32 110 aa12.01□□□□□ -0.49
ITGA6-201ENST00000264107 Q75L30 129 aa12.01□□□□□ -0.49
ITGA6-201ENST00000264107 Q8N377 158 aa12.01□□□□□ -0.49
ITGA6-201ENST00000264107 JMJD1CQ15652 2540 aa12□□□□□ -0.49
ITGA6-201ENST00000264107 FAM229AH3BQW9 127 aa12□□□□□ -0.49
ITGA6-201ENST00000264107 ABCA12Q86UK0 2595 aa11.99□□□□□ -0.49
ITGA6-201ENST00000264107 KCNQ1DNQ9H478 68 aa11.99□□□□□ -0.49
ITGA6-201ENST00000264107 PRAC1Q96KF2 57 aa11.98□□□□□ -0.49
ITGA6-201ENST00000264107 C8orf17Q9NRJ1 99 aa11.97□□□□□ -0.49
ITGA6-201ENST00000264107 USP9YO00507 2555 aaPredicted RBP11.97□□□□□ -0.49
ITGA6-201ENST00000264107 PHF5AQ7RTV0 110 aaKnown RBP11.96□□□□□ -0.5
ITGA6-201ENST00000264107 SPACA4Q8TDM5 124 aa11.95□□□□□ -0.5
ITGA6-201ENST00000264107 IGLV5-52A0A0A0MRZ9 124 aa11.94□□□□□ -0.5
ITGA6-201ENST00000264107 PLA2G1BP04054 148 aaKnown RBP11.93□□□□□ -0.5
ITGA6-201ENST00000264107 ZFYVE26Q68DK2 2539 aa11.93□□□□□ -0.5
ITGA6-201ENST00000264107 SETD2Q9BYW2 2564 aaPredicted RBP11.93□□□□□ -0.5
ITGA6-201ENST00000264107 KLK9Q2XQG4 91 aa11.93□□□□□ -0.5
ITGA6-201ENST00000264107 SMR3AQ99954 134 aa11.93□□□□□ -0.5
ITGA6-201ENST00000264107 IGLV1-50A0A075B6I6 118 aa11.92□□□□□ -0.5
ITGA6-201ENST00000264107 FAM168BA1KXE4 195 aa11.92□□□□□ -0.5
ITGA6-201ENST00000264107 A0A0G2JQZ4 141 aa11.91□□□□□ -0.5
ITGA6-201ENST00000264107 A0A1W2PNN7 141 aa11.91□□□□□ -0.5
ITGA6-201ENST00000264107 C16orf90A8MZG2 172 aa11.9□□□□□ -0.5
ITGA6-201ENST00000264107 A0A1W2PNM2 257 aa11.9□□□□□ -0.5
ITGA6-201ENST00000264107 Q8N9P0 234 aaPredicted RBP11.9□□□□□ -0.5
ITGA6-201ENST00000264107 LINC00588Q9Y4M8 146 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 154 ms