RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 Q8N814 137 aa8.9□□□□□ -0.98
SNX1-201ENST00000261889 CHCHD10Q8WYQ3 142 aaPredicted RBP8.9□□□□□ -0.98
SNX1-201ENST00000261889 H0YGX0 51 aa8.9□□□□□ -0.98
SNX1-201ENST00000261889 HRCT1Q6UXD1 115 aa8.9□□□□□ -0.98
SNX1-201ENST00000261889 NSD1Q96L73 2696 aaPredicted RBP8.89□□□□□ -0.99
SNX1-201ENST00000261889 Q8N9L7 120 aa8.89□□□□□ -0.99
SNX1-201ENST00000261889 J3KT08 172 aa8.89□□□□□ -0.99
SNX1-201ENST00000261889 PF4P02776 101 aa8.89□□□□□ -0.99
SNX1-201ENST00000261889 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.89□□□□□ -0.99
SNX1-201ENST00000261889 FAM19A3Q7Z5A8 133 aa8.89□□□□□ -0.99
SNX1-201ENST00000261889 SERP2Q8N6R1 65 aa8.88□□□□□ -0.99
SNX1-201ENST00000261889 UPK3BQ9BT76 320 aa8.87□□□□□ -0.99
SNX1-201ENST00000261889 KLK12Q9UKR0 248 aa8.87□□□□□ -0.99
SNX1-201ENST00000261889 CCKP06307 115 aa8.87□□□□□ -0.99
SNX1-201ENST00000261889 HIGD2BQ4VC39 106 aa8.87□□□□□ -0.99
SNX1-201ENST00000261889 Q6ZQY7 126 aa8.87□□□□□ -0.99
SNX1-201ENST00000261889 Q6JHZ5 121 aa8.87□□□□□ -0.99
SNX1-201ENST00000261889 REG3AQ06141 175 aa8.86□□□□□ -0.99
SNX1-201ENST00000261889 TRAV10A0A0B4J240 114 aa8.86□□□□□ -0.99
SNX1-201ENST00000261889 CRYGAP11844 174 aa8.86□□□□□ -0.99
SNX1-201ENST00000261889 DPH3Q96FX2 82 aa8.86□□□□□ -0.99
SNX1-201ENST00000261889 CELA1Q9UNI1 258 aa8.86□□□□□ -0.99
SNX1-201ENST00000261889 SMIM9A6NGZ8 99 aa8.85□□□□□ -0.99
SNX1-201ENST00000261889 IGLV1-51P01701 117 aa8.85□□□□□ -0.99
SNX1-201ENST00000261889 KIAA0087Q14695 138 aa8.84□□□□□ -0.99
SNX1-201ENST00000261889 SRRM2Q9UQ35 2752 aaKnown RBP8.83□□□□□ -1
SNX1-201ENST00000261889 KRTAP10-3P60369 221 aa8.82□□□□□ -1
SNX1-201ENST00000261889 SPAG11BQ08648 103 aa8.82□□□□□ -1
SNX1-201ENST00000261889 RMI2Q96E14 147 aa8.82□□□□□ -1
SNX1-201ENST00000261889 OBSCN-AS1Q96MR7 158 aa8.82□□□□□ -1
SNX1-201ENST00000261889 C16orf95Q9H693 158 aa8.82□□□□□ -1
SNX1-201ENST00000261889 CMYA5Q8N3K9 4069 aa8.82□□□□□ -1
SNX1-201ENST00000261889 TRAV25A0A0B4J276 109 aa8.82□□□□□ -1
SNX1-201ENST00000261889 ANK2Q01484 3957 aa8.82□□□□□ -1
SNX1-201ENST00000261889 INAFM1C9JVW0 142 aa8.82□□□□□ -1
SNX1-201ENST00000261889 OVOL2Q9BRP0 275 aa8.82□□□□□ -1
SNX1-201ENST00000261889 UBL5Q9BZL1 73 aa8.82□□□□□ -1
SNX1-201ENST00000261889 TRBV10-3A0A0K0K1G6 114 aa8.81□□□□□ -1
SNX1-201ENST00000261889 Q8IZM0 81 aa8.81□□□□□ -1
SNX1-201ENST00000261889 X6R8D5 127 aa8.81□□□□□ -1
SNX1-201ENST00000261889 PRO0255Q9UI72 69 aa8.8□□□□□ -1
SNX1-201ENST00000261889 RBM3P98179 157 aaKnown RBP8.8□□□□□ -1
SNX1-201ENST00000261889 TMEM256-PLSCR3K7ERE1 68 aa8.79□□□□□ -1
SNX1-201ENST00000261889 DAD1P61803 113 aa8.79□□□□□ -1
SNX1-201ENST00000261889 DEFB105AQ8NG35 78 aa8.79□□□□□ -1
SNX1-201ENST00000261889 IGHV4-28A0A0C4DH34 117 aa8.78□□□□□ -1
SNX1-201ENST00000261889 CD164L2Q6UWJ8 174 aa8.77□□□□□ -1.01
SNX1-201ENST00000261889 LINC00575Q6W349 94 aa8.77□□□□□ -1.01
SNX1-201ENST00000261889 PRB2P02812 416 aaPredicted RBP8.77□□□□□ -1.01
SNX1-201ENST00000261889 LINC01547P58512 204 aaPredicted RBP8.77□□□□□ -1.01
SNX1-201ENST00000261889 Q6ZVQ6 151 aa8.76□□□□□ -1.01
SNX1-201ENST00000261889 C3orf84H3BNL1 204 aa8.76□□□□□ -1.01
SNX1-201ENST00000261889 TM2D3Q9BRN9 247 aa8.76□□□□□ -1.01
SNX1-201ENST00000261889 RETNQ9HD89 108 aa8.75□□□□□ -1.01
SNX1-201ENST00000261889 JMJD7-PLA2G4BH0Y9G9 81 aa8.75□□□□□ -1.01
SNX1-201ENST00000261889 Q6ZQT0 140 aa8.75□□□□□ -1.01
SNX1-201ENST00000261889 TMEM258P61165 79 aa8.74□□□□□ -1.01
SNX1-201ENST00000261889 COL7A1Q02388 2944 aa8.74□□□□□ -1.01
SNX1-201ENST00000261889 TENM2Q9NT68 2774 aa8.73□□□□□ -1.01
SNX1-201ENST00000261889 BPY2O14599 106 aa8.72□□□□□ -1.01
SNX1-201ENST00000261889 F8WEM9 126 aa8.72□□□□□ -1.01
SNX1-201ENST00000261889 Q5XG85 94 aa8.72□□□□□ -1.01
SNX1-201ENST00000261889 C6orf48Q9UBA6 75 aa8.72□□□□□ -1.01
SNX1-201ENST00000261889 LINC00474Q9P2X8 69 aa8.72□□□□□ -1.01
SNX1-201ENST00000261889 A0A1B0GUV1 79 aa8.71□□□□□ -1.01
SNX1-201ENST00000261889 WFDC10BQ8IUB3 73 aa8.71□□□□□ -1.01
SNX1-201ENST00000261889 DNAH3Q8TD57 4116 aa8.71□□□□□ -1.02
SNX1-201ENST00000261889 C5orf47Q569G3 176 aa8.7□□□□□ -1.02
SNX1-201ENST00000261889 MGAM2Q2M2H8 2515 aa8.7□□□□□ -1.02
SNX1-201ENST00000261889 A0A0G2JQZ4 141 aa8.7□□□□□ -1.02
SNX1-201ENST00000261889 A0A1W2PNN7 141 aa8.7□□□□□ -1.02
SNX1-201ENST00000261889 FAM236DA0A1B0GTK5 79 aa8.69□□□□□ -1.02
SNX1-201ENST00000261889 LRCOL1A6NCL2 159 aa8.69□□□□□ -1.02
SNX1-201ENST00000261889 FAM236CP0DP71 79 aa8.69□□□□□ -1.02
SNX1-201ENST00000261889 MUC7Q8TAX7 377 aa8.69□□□□□ -1.02
SNX1-201ENST00000261889 ZNF561-AS1K7EIQ3 104 aa8.68□□□□□ -1.02
SNX1-201ENST00000261889 H7BZZ5 65 aa8.68□□□□□ -1.02
SNX1-201ENST00000261889 LINC00167Q96N53 147 aa8.67□□□□□ -1.02
SNX1-201ENST00000261889 CAMK2N2Q96S95 79 aa8.67□□□□□ -1.02
SNX1-201ENST00000261889 ZNF73O43830 326 aaPredicted RBP8.67□□□□□ -1.02
SNX1-201ENST00000261889 MPLKIPQ8TAP9 179 aa8.67□□□□□ -1.02
SNX1-201ENST00000261889 LYPD5Q6UWN5 251 aa8.66□□□□□ -1.02
SNX1-201ENST00000261889 DIRC1Q969H9 104 aa8.66□□□□□ -1.02
SNX1-201ENST00000261889 RPL37AP8A6NKH3 93 aa8.66□□□□□ -1.02
SNX1-201ENST00000261889 Q6ZRU5 148 aa8.65□□□□□ -1.02
SNX1-201ENST00000261889 NDUFC2O95298 119 aa8.65□□□□□ -1.03
SNX1-201ENST00000261889 IGLV6-57P01721 117 aa8.63□□□□□ -1.03
SNX1-201ENST00000261889 COX7BP24311 80 aa8.63□□□□□ -1.03
SNX1-201ENST00000261889 PRR4Q16378 134 aa8.63□□□□□ -1.03
SNX1-201ENST00000261889 LINC00336Q6ZUF6 198 aa8.63□□□□□ -1.03
SNX1-201ENST00000261889 COX17Q14061 63 aa8.62□□□□□ -1.03
SNX1-201ENST00000261889 KRTAP24-1Q3LI83 254 aa8.62□□□□□ -1.03
SNX1-201ENST00000261889 LINC00612Q8N6U2 182 aa8.62□□□□□ -1.03
SNX1-201ENST00000261889 CMC4P56277 68 aaPredicted RBP8.61□□□□□ -1.03
SNX1-201ENST00000261889 PKIGQ9Y2B9 76 aa8.61□□□□□ -1.03
SNX1-201ENST00000261889 IGKV2D-24A0A075B6R9 120 aa8.61□□□□□ -1.03
SNX1-201ENST00000261889 A0A0U1RQV1 116 aa8.61□□□□□ -1.03
SNX1-201ENST00000261889 DEFB116Q30KQ4 102 aa8.61□□□□□ -1.03
SNX1-201ENST00000261889 OXLD1Q5BKU9 147 aa8.61□□□□□ -1.03
SNX1-201ENST00000261889 FAM168BA1KXE4 195 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms