RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 LOC107984640A0A0U1RRK4 108 aa9.9□□□□□ -0.82
SFSWAP-201ENST00000261674 NANOS2P60321 138 aaKnown RBP9.9□□□□□ -0.82
SFSWAP-201ENST00000261674 ATOX1O00244 68 aa9.9□□□□□ -0.82
SFSWAP-201ENST00000261674 RPL18AQ02543 176 aaKnown RBP9.9□□□□□ -0.82
SFSWAP-201ENST00000261674 MRAPQ8TCY5 172 aa9.9□□□□□ -0.83
SFSWAP-201ENST00000261674 Q8NDZ9 215 aa9.89□□□□□ -0.83
SFSWAP-201ENST00000261674 SVIPQ8NHG7 77 aa9.89□□□□□ -0.83
SFSWAP-201ENST00000261674 KIAA0087Q14695 138 aa9.89□□□□□ -0.83
SFSWAP-201ENST00000261674 PPDPFQ9H3Y8 114 aa9.89□□□□□ -0.83
SFSWAP-201ENST00000261674 XAGE1AQ9HD64 81 aa9.89□□□□□ -0.83
SFSWAP-201ENST00000261674 TENM3Q9P273 2699 aa9.89□□□□□ -0.83
SFSWAP-201ENST00000261674 TRAV23DV6A0A075B6W5 121 aa9.88□□□□□ -0.83
SFSWAP-201ENST00000261674 SPAG11BQ08648 103 aa9.88□□□□□ -0.83
SFSWAP-201ENST00000261674 IGHV4-28A0A0C4DH34 117 aa9.88□□□□□ -0.83
SFSWAP-201ENST00000261674 USP17L23D6RBM5 183 aa9.88□□□□□ -0.83
SFSWAP-201ENST00000261674 CELA1Q9UNI1 258 aa9.88□□□□□ -0.83
SFSWAP-201ENST00000261674 TMEM256-PLSCR3K7ERE1 68 aa9.87□□□□□ -0.83
SFSWAP-201ENST00000261674 CCKP06307 115 aa9.87□□□□□ -0.83
SFSWAP-201ENST00000261674 C9orf66Q5T8R8 295 aa9.87□□□□□ -0.83
SFSWAP-201ENST00000261674 FAM19A1Q7Z5A9 133 aa9.87□□□□□ -0.83
SFSWAP-201ENST00000261674 Q6JHZ5 121 aa9.87□□□□□ -0.83
SFSWAP-201ENST00000261674 ENHOQ6UWT2 76 aa9.87□□□□□ -0.83
SFSWAP-201ENST00000261674 LINC01561Q8N1V8 128 aa9.87□□□□□ -0.83
SFSWAP-201ENST00000261674 CYSTM1Q9H1C7 97 aa9.87□□□□□ -0.83
SFSWAP-201ENST00000261674 KRTAP10-11P60412 298 aa9.86□□□□□ -0.83
SFSWAP-201ENST00000261674 JMJD7-PLA2G4BH0Y9G9 81 aa9.85□□□□□ -0.83
SFSWAP-201ENST00000261674 OBSCN-AS1Q96MR7 158 aa9.85□□□□□ -0.83
SFSWAP-201ENST00000261674 C2orf48Q96LS8 159 aa9.85□□□□□ -0.83
SFSWAP-201ENST00000261674 RETNQ9HD89 108 aa9.85□□□□□ -0.83
SFSWAP-201ENST00000261674 DNHD1Q96M86 4753 aa9.85□□□□□ -0.83
SFSWAP-201ENST00000261674 HAMPP81172 84 aa9.84□□□□□ -0.83
SFSWAP-201ENST00000261674 LINC00612Q8N6U2 182 aa9.83□□□□□ -0.84
SFSWAP-201ENST00000261674 UBL5Q9BZL1 73 aa9.83□□□□□ -0.84
SFSWAP-201ENST00000261674 LYRM9A8MSI8 78 aa9.82□□□□□ -0.84
SFSWAP-201ENST00000261674 SMIM9A6NGZ8 99 aa9.82□□□□□ -0.84
SFSWAP-201ENST00000261674 RBM3P98179 157 aaKnown RBP9.82□□□□□ -0.84
SFSWAP-201ENST00000261674 HIGD2BQ4VC39 106 aa9.82□□□□□ -0.84
SFSWAP-201ENST00000261674 Q6ZQY7 126 aa9.82□□□□□ -0.84
SFSWAP-201ENST00000261674 IGHV4-30-4P0DP06 118 aa9.81□□□□□ -0.84
SFSWAP-201ENST00000261674 SERP2Q8N6R1 65 aa9.81□□□□□ -0.84
SFSWAP-201ENST00000261674 GHRHP01286 108 aa9.81□□□□□ -0.84
SFSWAP-201ENST00000261674 COX17Q14061 63 aa9.81□□□□□ -0.84
SFSWAP-201ENST00000261674 NDUFC2O95298 119 aa9.8□□□□□ -0.84
SFSWAP-201ENST00000261674 M0R2N4 97 aa9.8□□□□□ -0.84
SFSWAP-201ENST00000261674 LINC00575Q6W349 94 aa9.8□□□□□ -0.84
SFSWAP-201ENST00000261674 APOC4P55056 127 aa9.78□□□□□ -0.84
SFSWAP-201ENST00000261674 TRBV10-3A0A0K0K1G6 114 aa9.78□□□□□ -0.84
SFSWAP-201ENST00000261674 SPART-AS1P0CW21 52 aa9.78□□□□□ -0.84
SFSWAP-201ENST00000261674 CRYGAP11844 174 aa9.78□□□□□ -0.84
SFSWAP-201ENST00000261674 DSCR8Q96T75 97 aa9.78□□□□□ -0.84
SFSWAP-201ENST00000261674 UPK3BQ9BT76 320 aa9.78□□□□□ -0.84
SFSWAP-201ENST00000261674 SCXQ7RTU7 201 aa9.77□□□□□ -0.85
SFSWAP-201ENST00000261674 C20orf197Q8N268 126 aa9.75□□□□□ -0.85
SFSWAP-201ENST00000261674 ZNF561-AS1K7EIQ3 104 aa9.75□□□□□ -0.85
SFSWAP-201ENST00000261674 CMYA5Q8N3K9 4069 aa9.74□□□□□ -0.85
SFSWAP-201ENST00000261674 LELP1Q5T871 98 aa9.74□□□□□ -0.85
SFSWAP-201ENST00000261674 LINC00167Q96N53 147 aa9.74□□□□□ -0.85
SFSWAP-201ENST00000261674 J3KT08 172 aa9.73□□□□□ -0.85
SFSWAP-201ENST00000261674 Q8NAQ8 132 aa9.73□□□□□ -0.85
SFSWAP-201ENST00000261674 STAB2Q8WWQ8 2551 aa9.73□□□□□ -0.85
SFSWAP-201ENST00000261674 CAMK2N2Q96S95 79 aa9.73□□□□□ -0.85
SFSWAP-201ENST00000261674 C6orf48Q9UBA6 75 aa9.73□□□□□ -0.85
SFSWAP-201ENST00000261674 FAM19A5Q7Z5A7 132 aaPredicted RBP9.72□□□□□ -0.85
SFSWAP-201ENST00000261674 DIRC1Q969H9 104 aa9.72□□□□□ -0.85
SFSWAP-201ENST00000261674 Q6ZQT0 140 aa9.71□□□□□ -0.85
SFSWAP-201ENST00000261674 WFDC10BQ8IUB3 73 aa9.71□□□□□ -0.85
SFSWAP-201ENST00000261674 MIFP14174 115 aa9.7□□□□□ -0.86
SFSWAP-201ENST00000261674 TGP01266 2768 aa9.7□□□□□ -0.86
SFSWAP-201ENST00000261674 LYPD5Q6UWN5 251 aa9.69□□□□□ -0.86
SFSWAP-201ENST00000261674 ZNF73O43830 326 aaPredicted RBP9.69□□□□□ -0.86
SFSWAP-201ENST00000261674 Q6ZVQ6 151 aa9.69□□□□□ -0.86
SFSWAP-201ENST00000261674 A0A0J9YWU9 116 aa9.68□□□□□ -0.86
SFSWAP-201ENST00000261674 IGLV6-57P01721 117 aa9.68□□□□□ -0.86
SFSWAP-201ENST00000261674 COX7BP24311 80 aa9.68□□□□□ -0.86
SFSWAP-201ENST00000261674 LINC01547P58512 204 aaPredicted RBP9.68□□□□□ -0.86
SFSWAP-201ENST00000261674 DEFB105AQ8NG35 78 aa9.67□□□□□ -0.86
SFSWAP-201ENST00000261674 ATP5EP2Q5VTU8 51 aa9.67□□□□□ -0.86
SFSWAP-201ENST00000261674 TENM2Q9NT68 2774 aa9.66□□□□□ -0.86
SFSWAP-201ENST00000261674 COL7A1Q02388 2944 aa9.66□□□□□ -0.86
SFSWAP-201ENST00000261674 DPH3Q96FX2 82 aa9.66□□□□□ -0.86
SFSWAP-201ENST00000261674 KPRPQ5T749 579 aaPredicted RBP9.66□□□□□ -0.86
SFSWAP-201ENST00000261674 SNURFQ9Y675 71 aa9.66□□□□□ -0.86
SFSWAP-201ENST00000261674 TMEM258P61165 79 aa9.65□□□□□ -0.86
SFSWAP-201ENST00000261674 Q6ZRU5 148 aa9.65□□□□□ -0.86
SFSWAP-201ENST00000261674 IGKV2D-24A0A075B6R9 120 aa9.65□□□□□ -0.86
SFSWAP-201ENST00000261674 TRAV10A0A0B4J240 114 aa9.65□□□□□ -0.86
SFSWAP-201ENST00000261674 MUC7Q8TAX7 377 aa9.65□□□□□ -0.86
SFSWAP-201ENST00000261674 PRR34Q9NV39 138 aa9.65□□□□□ -0.86
SFSWAP-201ENST00000261674 K7EIL1 84 aa9.63□□□□□ -0.87
SFSWAP-201ENST00000261674 Q6ZTC4 211 aa9.63□□□□□ -0.87
SFSWAP-201ENST00000261674 Q8N9L7 120 aa9.62□□□□□ -0.87
SFSWAP-201ENST00000261674 MEGF8Q7Z7M0 2845 aa9.61□□□□□ -0.87
SFSWAP-201ENST00000261674 LOC110117498A0A087WWA1 95 aa9.6□□□□□ -0.87
SFSWAP-201ENST00000261674 C1orf43Q9BWL3 253 aa9.6□□□□□ -0.87
SFSWAP-201ENST00000261674 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.6□□□□□ -0.87
SFSWAP-201ENST00000261674 OXTP01178 125 aa9.59□□□□□ -0.87
SFSWAP-201ENST00000261674 C3orf84H3BNL1 204 aa9.59□□□□□ -0.87
SFSWAP-201ENST00000261674 VPREB1P12018 145 aa9.59□□□□□ -0.87
SFSWAP-201ENST00000261674 RMI2Q96E14 147 aa9.58□□□□□ -0.88
SFSWAP-201ENST00000261674 M0R378 163 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms