RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 LAMA1P25391 3075 aa9.18□□□□□ -0.94
TMEM260-201ENST00000261556 FRYLO94915 3013 aa9.18□□□□□ -0.94
TMEM260-201ENST00000261556 C16orf95Q9H693 158 aa9.17□□□□□ -0.94
TMEM260-201ENST00000261556 HELZ2Q9BYK8 2649 aaKnown RBP9.17□□□□□ -0.94
TMEM260-201ENST00000261556 IGKV2-24A0A0C4DH68 120 aa9.17□□□□□ -0.94
TMEM260-201ENST00000261556 HCG22E2RYF7 251 aa9.17□□□□□ -0.94
TMEM260-201ENST00000261556 A0A0J9YWU9 116 aa9.17□□□□□ -0.94
TMEM260-201ENST00000261556 SERTAD4-AS1Q5TG53 156 aa9.17□□□□□ -0.94
TMEM260-201ENST00000261556 IGKV2-28A0A075B6P5 120 aa9.17□□□□□ -0.94
TMEM260-201ENST00000261556 IGKV2D-28P01615 120 aa9.17□□□□□ -0.94
TMEM260-201ENST00000261556 KTN1-AS1Q86SY8 53 aa9.17□□□□□ -0.94
TMEM260-201ENST00000261556 SETXQ7Z333 2677 aaKnown RBP9.16□□□□□ -0.94
TMEM260-201ENST00000261556 Q6ZSN1 163 aa9.16□□□□□ -0.94
TMEM260-201ENST00000261556 NDUFS5O43920 106 aa9.16□□□□□ -0.94
TMEM260-201ENST00000261556 REG3AQ06141 175 aa9.16□□□□□ -0.94
TMEM260-201ENST00000261556 TRAV22A0A0B4J277 110 aa9.15□□□□□ -0.94
TMEM260-201ENST00000261556 C6orf223Q8N319 242 aa9.15□□□□□ -0.94
TMEM260-201ENST00000261556 C1orf158Q8N1D5 194 aa9.14□□□□□ -0.95
TMEM260-201ENST00000261556 COL4A2P08572 1712 aa9.14□□□□□ -0.95
TMEM260-201ENST00000261556 CFAP46Q8IYW2 2715 aa9.14□□□□□ -0.95
TMEM260-201ENST00000261556 MUC3AQ02505 3323 aa9.14□□□□□ -0.95
TMEM260-201ENST00000261556 BCE1O60756 84 aa9.13□□□□□ -0.95
TMEM260-201ENST00000261556 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.13□□□□□ -0.95
TMEM260-201ENST00000261556 C1orf64Q8NEQ6 169 aa9.13□□□□□ -0.95
TMEM260-201ENST00000261556 IGLV5-39A0A0G2JS06 123 aa9.12□□□□□ -0.95
TMEM260-201ENST00000261556 ZNF73O43830 326 aaPredicted RBP9.12□□□□□ -0.95
TMEM260-201ENST00000261556 RAI1Q7Z5J4 1906 aaPredicted RBP9.12□□□□□ -0.95
TMEM260-201ENST00000261556 WFDC13Q8IUB5 93 aa9.12□□□□□ -0.95
TMEM260-201ENST00000261556 CHCHD10Q8WYQ3 142 aaPredicted RBP9.12□□□□□ -0.95
TMEM260-201ENST00000261556 TRBV6-8A0A0A6YYG3 113 aa9.12□□□□□ -0.95
TMEM260-201ENST00000261556 CXCL6P80162 114 aa9.11□□□□□ -0.95
TMEM260-201ENST00000261556 MUC7Q8TAX7 377 aa9.11□□□□□ -0.95
TMEM260-201ENST00000261556 ODF3L2Q3SX64 289 aa9.11□□□□□ -0.95
TMEM260-201ENST00000261556 WFDC10BQ8IUB3 73 aa9.11□□□□□ -0.95
TMEM260-201ENST00000261556 C9orf116Q5BN46 136 aaPredicted RBP9.11□□□□□ -0.95
TMEM260-201ENST00000261556 CDC42SE2Q9NRR3 84 aa9.1□□□□□ -0.95
TMEM260-201ENST00000261556 Q6ZQT0 140 aa9.1□□□□□ -0.95
TMEM260-201ENST00000261556 SMIM29Q86T20 159 aa9.1□□□□□ -0.95
TMEM260-201ENST00000261556 LINC00208Q96KT6 92 aa9.1□□□□□ -0.95
TMEM260-201ENST00000261556 XAGE1AQ9HD64 81 aa9.1□□□□□ -0.95
TMEM260-201ENST00000261556 M0R2N4 97 aa9.09□□□□□ -0.95
TMEM260-201ENST00000261556 DEFB116Q30KQ4 102 aa9.09□□□□□ -0.95
TMEM260-201ENST00000261556 MYO15AQ9UKN7 3530 aa9.09□□□□□ -0.95
TMEM260-201ENST00000261556 COX7BP24311 80 aa9.09□□□□□ -0.95
TMEM260-201ENST00000261556 LOC100131303A0A0U1RQF7 123 aa9.08□□□□□ -0.96
TMEM260-201ENST00000261556 LINC00575Q6W349 94 aa9.08□□□□□ -0.96
TMEM260-201ENST00000261556 IGHV4-30-4P0DP06 118 aa9.08□□□□□ -0.96
TMEM260-201ENST00000261556 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.08□□□□□ -0.96
TMEM260-201ENST00000261556 SPATA3Q8NHX4 192 aa9.08□□□□□ -0.96
TMEM260-201ENST00000261556 C22orf24Q9Y442 160 aa9.08□□□□□ -0.96
TMEM260-201ENST00000261556 KPRPQ5T749 579 aaPredicted RBP9.07□□□□□ -0.96
TMEM260-201ENST00000261556 TEP1Q99973 2627 aaKnown RBP9.07□□□□□ -0.96
TMEM260-201ENST00000261556 AKAP13Q12802 2813 aa9.07□□□□□ -0.96
TMEM260-201ENST00000261556 FLNAP21333 2647 aaKnown RBP9.05□□□□□ -0.96
TMEM260-201ENST00000261556 Q6ZRU5 148 aa9.05□□□□□ -0.96
TMEM260-201ENST00000261556 ITPR3Q14573 2671 aa9.04□□□□□ -0.96
TMEM260-201ENST00000261556 A0A096LNI7 61 aa9.03□□□□□ -0.96
TMEM260-201ENST00000261556 NDUFB1O75438 58 aa9.03□□□□□ -0.96
TMEM260-201ENST00000261556 IGLV1-51P01701 117 aa9.03□□□□□ -0.96
TMEM260-201ENST00000261556 SYCNQ0VAF6 134 aa9.03□□□□□ -0.96
TMEM260-201ENST00000261556 CD164L2Q6UWJ8 174 aa9.03□□□□□ -0.96
TMEM260-201ENST00000261556 TRBV7-4A0A0J9YYF1 115 aa9.02□□□□□ -0.96
TMEM260-201ENST00000261556 C14orf177Q52M58 125 aa9.02□□□□□ -0.96
TMEM260-201ENST00000261556 M0R378 163 aa9.02□□□□□ -0.97
TMEM260-201ENST00000261556 B9D2Q9BPU9 175 aa9.02□□□□□ -0.97
TMEM260-201ENST00000261556 IGLV4-60A0A075B6I1 120 aa9.01□□□□□ -0.97
TMEM260-201ENST00000261556 IGLV5-45A0A087WSX0 123 aa9.01□□□□□ -0.97
TMEM260-201ENST00000261556 Q6ZRP5 223 aa9.01□□□□□ -0.97
TMEM260-201ENST00000261556 hDV103S1A0JD37 113 aa9.01□□□□□ -0.97
TMEM260-201ENST00000261556 LIMD2Q9BT23 127 aa9□□□□□ -0.97
TMEM260-201ENST00000261556 MAP1AP78559 2803 aaPredicted RBP8.99□□□□□ -0.97
TMEM260-201ENST00000261556 KALRNO60229 2985 aa8.99□□□□□ -0.97
TMEM260-201ENST00000261556 H3BQ85 93 aa8.98□□□□□ -0.97
TMEM260-201ENST00000261556 LELP1Q5T871 98 aa8.98□□□□□ -0.97
TMEM260-201ENST00000261556 VPREB1P12018 145 aa8.98□□□□□ -0.97
TMEM260-201ENST00000261556 CASC2Q6XLA1 102 aa8.97□□□□□ -0.97
TMEM260-201ENST00000261556 OBSCN-AS1Q96MR7 158 aa8.97□□□□□ -0.97
TMEM260-201ENST00000261556 FSHBP01225 129 aa8.97□□□□□ -0.97
TMEM260-201ENST00000261556 C7orf65Q6ZTY9 151 aa8.97□□□□□ -0.97
TMEM260-201ENST00000261556 LINC00959A0A1B0GUT2 108 aa8.96□□□□□ -0.97
TMEM260-201ENST00000261556 SPAG11AQ6PDA7 123 aa8.96□□□□□ -0.98
TMEM260-201ENST00000261556 A8MU10 97 aa8.95□□□□□ -0.98
TMEM260-201ENST00000261556 LCA10Q71F78 164 aa8.95□□□□□ -0.98
TMEM260-201ENST00000261556 ATP11AUNQ6ZP68 121 aa8.95□□□□□ -0.98
TMEM260-201ENST00000261556 STAB1Q9NY15 2570 aa8.94□□□□□ -0.98
TMEM260-201ENST00000261556 LY6G6CO95867 125 aa8.94□□□□□ -0.98
TMEM260-201ENST00000261556 LOC110117498A0A087WWA1 95 aa8.93□□□□□ -0.98
TMEM260-201ENST00000261556 Q1T7F1 81 aa8.93□□□□□ -0.98
TMEM260-201ENST00000261556 PCOTHQ58A44 107 aa8.93□□□□□ -0.98
TMEM260-201ENST00000261556 ERC2-IT1O76042 136 aa8.92□□□□□ -0.98
TMEM260-201ENST00000261556 C10orf25Q5T742 122 aa8.92□□□□□ -0.98
TMEM260-201ENST00000261556 Q6ZTC4 211 aa8.92□□□□□ -0.98
TMEM260-201ENST00000261556 CR1P17927 2039 aa8.92□□□□□ -0.98
TMEM260-201ENST00000261556 UNQ6190/PRO20217Q6UXQ8 127 aa8.92□□□□□ -0.98
TMEM260-201ENST00000261556 TACC2O95359 2948 aa8.92□□□□□ -0.98
TMEM260-201ENST00000261556 EPM2AB3EWF7 344 aa8.91□□□□□ -0.98
TMEM260-201ENST00000261556 DMDP11532 3685 aa8.9□□□□□ -0.98
TMEM260-201ENST00000261556 DCHS1Q96JQ0 3298 aa8.9□□□□□ -0.98
TMEM260-201ENST00000261556 PRAC1Q96KF2 57 aa8.9□□□□□ -0.98
TMEM260-201ENST00000261556 ZNF292O60281 2723 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms