RNA–Protein interactions for RNA: ENST00000257765.9

KHDC1-201, Transcript of KH domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KHDC1, Length 1,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1-201ENST00000257765 ZNF706Q9Y5V0 76 aaPredicted RBP10.51□□□□□ -0.73
KHDC1-201ENST00000257765 A0A096LNJ9 63 aa10.5□□□□□ -0.73
KHDC1-201ENST00000257765 FABP9Q0Z7S8 132 aa10.5□□□□□ -0.73
KHDC1-201ENST00000257765 LINC00337Q8N6G1 96 aa10.49□□□□□ -0.73
KHDC1-201ENST00000257765 CLLU1Q5K131 121 aa10.48□□□□□ -0.73
KHDC1-201ENST00000257765 TMEM218A2RU14 115 aa10.47□□□□□ -0.73
KHDC1-201ENST00000257765 C11orf86A6NJI1 115 aa10.47□□□□□ -0.73
KHDC1-201ENST00000257765 KRTAP13-3Q3SY46 172 aa10.47□□□□□ -0.73
KHDC1-201ENST00000257765 TMEM170BQ5T4T1 132 aa10.47□□□□□ -0.73
KHDC1-201ENST00000257765 Q8NBF4 154 aa10.47□□□□□ -0.73
KHDC1-201ENST00000257765 HBDP02042 147 aa10.46□□□□□ -0.73
KHDC1-201ENST00000257765 LINC00158P58513 81 aa10.46□□□□□ -0.73
KHDC1-201ENST00000257765 UQCC3Q6UW78 93 aa10.46□□□□□ -0.73
KHDC1-201ENST00000257765 DAND5Q8N907 189 aa10.46□□□□□ -0.73
KHDC1-201ENST00000257765 ASB16-AS1Q495Z4 193 aa10.45□□□□□ -0.74
KHDC1-201ENST00000257765 PRYO14603 147 aa10.44□□□□□ -0.74
KHDC1-201ENST00000257765 BAGE3Q86Y29 109 aa10.44□□□□□ -0.74
KHDC1-201ENST00000257765 URB1-AS1Q96HZ7 61 aa10.44□□□□□ -0.74
KHDC1-201ENST00000257765 A0A0U1RRA0 63 aa10.43□□□□□ -0.74
KHDC1-201ENST00000257765 LINC00614P0C842 121 aa10.42□□□□□ -0.74
KHDC1-201ENST00000257765 LINC01547P58512 204 aaPredicted RBP10.42□□□□□ -0.74
KHDC1-201ENST00000257765 PMCHL1Q16048 86 aa10.42□□□□□ -0.74
KHDC1-201ENST00000257765 C18orf32Q8TCD1 76 aa10.42□□□□□ -0.74
KHDC1-201ENST00000257765 SEC11CQ9BY50 192 aa10.42□□□□□ -0.74
KHDC1-201ENST00000257765 SPINK1P00995 79 aa10.41□□□□□ -0.74
KHDC1-201ENST00000257765 SPRR1AP35321 89 aa10.4□□□□□ -0.74
KHDC1-201ENST00000257765 SMCR5Q8TEV8 140 aa10.4□□□□□ -0.74
KHDC1-201ENST00000257765 NCR3O14931 201 aa10.39□□□□□ -0.75
KHDC1-201ENST00000257765 SEC61BP60468 96 aaKnown RBP10.39□□□□□ -0.75
KHDC1-201ENST00000257765 BOD1L2Q8IYS8 172 aa10.39□□□□□ -0.75
KHDC1-201ENST00000257765 CHTOPQ9Y3Y2 248 aaKnown RBP10.39□□□□□ -0.75
KHDC1-201ENST00000257765 ETDCA0A1B0GVM5 59 aa10.38□□□□□ -0.75
KHDC1-201ENST00000257765 ATP6V1G1O75348 118 aa10.38□□□□□ -0.75
KHDC1-201ENST00000257765 KCNQ1DNQ9H478 68 aa10.38□□□□□ -0.75
KHDC1-201ENST00000257765 TMEM223A0PJW6 202 aa10.37□□□□□ -0.75
KHDC1-201ENST00000257765 SMIM13P0DJ93 91 aa10.37□□□□□ -0.75
KHDC1-201ENST00000257765 LINC00483Q53H64 154 aa10.37□□□□□ -0.75
KHDC1-201ENST00000257765 MEIG1Q5JSS6 88 aa10.37□□□□□ -0.75
KHDC1-201ENST00000257765 KRTAP4-1Q9BYQ7 146 aa10.37□□□□□ -0.75
KHDC1-201ENST00000257765 NDUFA12Q9UI09 145 aa10.37□□□□□ -0.75
KHDC1-201ENST00000257765 TRAPPC1Q9Y5R8 145 aa10.37□□□□□ -0.75
KHDC1-201ENST00000257765 KRTAP4-16G5E9R7 235 aaPredicted RBP10.36□□□□□ -0.75
KHDC1-201ENST00000257765 RHEBQ15382 184 aa10.35□□□□□ -0.75
KHDC1-201ENST00000257765 FAM19A2Q8N3H0 131 aa10.35□□□□□ -0.75
KHDC1-201ENST00000257765 MIR7-3HGQ8N6C7 128 aa10.35□□□□□ -0.75
KHDC1-201ENST00000257765 RPS10P5Q9NQ39 176 aa10.35□□□□□ -0.75
KHDC1-201ENST00000257765 GAGE2AQ6NT46 116 aa10.34□□□□□ -0.75
KHDC1-201ENST00000257765 TRBV10-3A0A0K0K1G6 114 aa10.33□□□□□ -0.76
KHDC1-201ENST00000257765 RPS29P62273 56 aaKnown RBP10.33□□□□□ -0.76
KHDC1-201ENST00000257765 MOBPQ13875 183 aa10.33□□□□□ -0.76
KHDC1-201ENST00000257765 IGLV9-49A0A0B4J1Y8 123 aa10.32□□□□□ -0.76
KHDC1-201ENST00000257765 HERV-K104P63124 156 aa10.32□□□□□ -0.76
KHDC1-201ENST00000257765 S100A12P80511 92 aa10.32□□□□□ -0.76
KHDC1-201ENST00000257765 LCE2DQ5TA82 110 aaPredicted RBP10.32□□□□□ -0.76
KHDC1-201ENST00000257765 TRAV12-1A0A0B4J245 112 aa10.31□□□□□ -0.76
KHDC1-201ENST00000257765 Q8N377 158 aa10.31□□□□□ -0.76
KHDC1-201ENST00000257765 LINC00587B1AMM8 73 aa10.3□□□□□ -0.76
KHDC1-201ENST00000257765 B5MCH6 92 aa10.29□□□□□ -0.76
KHDC1-201ENST00000257765 C10orf91Q5T1B1 145 aa10.29□□□□□ -0.76
KHDC1-201ENST00000257765 SSBP3-AS1Q7Z2R9 100 aa10.29□□□□□ -0.76
KHDC1-201ENST00000257765 COMMD7Q86VX2 200 aa10.29□□□□□ -0.76
KHDC1-201ENST00000257765 IFI27L1Q96BM0 104 aa10.29□□□□□ -0.76
KHDC1-201ENST00000257765 SLC25A20O43772 301 aa10.28□□□□□ -0.76
KHDC1-201ENST00000257765 ERC2-IT1O76042 136 aa10.28□□□□□ -0.76
KHDC1-201ENST00000257765 MAP1LC3CQ9BXW4 147 aa10.28□□□□□ -0.76
KHDC1-201ENST00000257765 IFITM2Q01629 132 aa10.27□□□□□ -0.77
KHDC1-201ENST00000257765 XP32Q5T750 250 aa10.26□□□□□ -0.77
KHDC1-201ENST00000257765 MYMXA0A1B0GTQ4 84 aa10.25□□□□□ -0.77
KHDC1-201ENST00000257765 DDTP30046 118 aa10.25□□□□□ -0.77
KHDC1-201ENST00000257765 Q9BRP9 147 aa10.25□□□□□ -0.77
KHDC1-201ENST00000257765 Q6ZRX8 168 aa10.24□□□□□ -0.77
KHDC1-201ENST00000257765 CHCHD1Q96BP2 118 aaKnown RBP10.24□□□□□ -0.77
KHDC1-201ENST00000257765 TRBV10-2A0A0K0K1G8 114 aa10.22□□□□□ -0.77
KHDC1-201ENST00000257765 LOC107984156A0A0G2JMH3 177 aa10.21□□□□□ -0.77
KHDC1-201ENST00000257765 C9orf153Q5TBE3 101 aa10.21□□□□□ -0.77
KHDC1-201ENST00000257765 ARL17AQ8IVW1 177 aa10.21□□□□□ -0.77
KHDC1-201ENST00000257765 SPANXB1Q9NS25 103 aaPredicted RBP10.2□□□□□ -0.78
KHDC1-201ENST00000257765 CRCT1Q9UGL9 99 aa10.2□□□□□ -0.78
KHDC1-201ENST00000257765 TSPEAR-AS2P59090 65 aa10.19□□□□□ -0.78
KHDC1-201ENST00000257765 MIEN1Q9BRT3 115 aa10.18□□□□□ -0.78
KHDC1-201ENST00000257765 FSIP2Q5CZC0 6907 aa10.17□□□□□ -0.78
KHDC1-201ENST00000257765 JOSD1Q15040 202 aaPredicted RBP10.17□□□□□ -0.78
KHDC1-201ENST00000257765 S100A7L2Q5SY68 101 aa10.17□□□□□ -0.78
KHDC1-201ENST00000257765 LCE2CQ5TA81 110 aa10.17□□□□□ -0.78
KHDC1-201ENST00000257765 H0Y8G0 127 aa10.16□□□□□ -0.78
KHDC1-201ENST00000257765 LEPROTO15243 131 aa10.16□□□□□ -0.78
KHDC1-201ENST00000257765 HSBP1O75506 76 aa10.16□□□□□ -0.78
KHDC1-201ENST00000257765 TRAV23DV6A0A075B6W5 121 aa10.15□□□□□ -0.78
KHDC1-201ENST00000257765 IGLV6-57P01721 117 aa10.15□□□□□ -0.78
KHDC1-201ENST00000257765 NDUFC2O95298 119 aa10.14□□□□□ -0.79
KHDC1-201ENST00000257765 APOC3P02656 99 aa10.14□□□□□ -0.79
KHDC1-201ENST00000257765 SNAPINO95295 136 aa10.13□□□□□ -0.79
KHDC1-201ENST00000257765 J3QQQ9 107 aa10.12□□□□□ -0.79
KHDC1-201ENST00000257765 ST20-AS1Q8NBB2 130 aa10.12□□□□□ -0.79
KHDC1-201ENST00000257765 ZNF73O43830 326 aaPredicted RBP10.11□□□□□ -0.79
KHDC1-201ENST00000257765 PLNP26678 52 aa10.11□□□□□ -0.79
KHDC1-201ENST00000257765 NMUP48645 174 aa10.11□□□□□ -0.79
KHDC1-201ENST00000257765 KRTAP19-2Q3LHN2 52 aa10.11□□□□□ -0.79
KHDC1-201ENST00000257765 SVBPQ8N300 66 aa10.11□□□□□ -0.79
KHDC1-201ENST00000257765 HERVK_113P61574 105 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms