RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 IGKV2D-28P01615 120 aa8.28□□□□□ -1.08
CCNA1-201ENST00000255465 UBE2AP49459 152 aa8.28□□□□□ -1.08
CCNA1-201ENST00000255465 Q6ZQT0 140 aa8.28□□□□□ -1.08
CCNA1-201ENST00000255465 IGLV1-40P01703 118 aa8.28□□□□□ -1.08
CCNA1-201ENST00000255465 ATP11AUNQ6ZP68 121 aa8.28□□□□□ -1.08
CCNA1-201ENST00000255465 VWFP04275 2813 aa8.27□□□□□ -1.09
CCNA1-201ENST00000255465 PKD1L1Q8TDX9 2849 aa8.27□□□□□ -1.09
CCNA1-201ENST00000255465 A0A087WZ39 114 aa8.27□□□□□ -1.09
CCNA1-201ENST00000255465 SMIM1B2RUZ4 78 aa8.27□□□□□ -1.09
CCNA1-201ENST00000255465 C9orf66Q5T8R8 295 aa8.27□□□□□ -1.09
CCNA1-201ENST00000255465 C18orf65Q6ZTR6 163 aa8.27□□□□□ -1.09
CCNA1-201ENST00000255465 IGHV3-16A0A0C4DH30 117 aa8.26□□□□□ -1.09
CCNA1-201ENST00000255465 CHCHD7Q9BUK0 85 aa8.26□□□□□ -1.09
CCNA1-201ENST00000255465 CMYA5Q8N3K9 4069 aa8.26□□□□□ -1.09
CCNA1-201ENST00000255465 BPY2O14599 106 aa8.26□□□□□ -1.09
CCNA1-201ENST00000255465 C11orf45Q8TAV5 145 aa8.26□□□□□ -1.09
CCNA1-201ENST00000255465 TRAV22A0A0B4J277 110 aa8.25□□□□□ -1.09
CCNA1-201ENST00000255465 IGHV3-38A0A0C4DH36 116 aa8.25□□□□□ -1.09
CCNA1-201ENST00000255465 FAM74A4Q5TZK3 123 aa8.25□□□□□ -1.09
CCNA1-201ENST00000255465 CYP4F30PQ9H0H9 118 aa8.25□□□□□ -1.09
CCNA1-201ENST00000255465 ZNF73O43830 326 aaPredicted RBP8.24□□□□□ -1.09
CCNA1-201ENST00000255465 Q8N814 137 aa8.24□□□□□ -1.09
CCNA1-201ENST00000255465 HAMPP81172 84 aa8.23□□□□□ -1.09
CCNA1-201ENST00000255465 SYCNQ0VAF6 134 aa8.23□□□□□ -1.09
CCNA1-201ENST00000255465 MGAM2Q2M2H8 2515 aa8.23□□□□□ -1.09
CCNA1-201ENST00000255465 IGHV1OR15-1A0A075B7D0 117 aa8.23□□□□□ -1.09
CCNA1-201ENST00000255465 H3BUA1 57 aa8.23□□□□□ -1.09
CCNA1-201ENST00000255465 IGHV3-23P01764 117 aa8.23□□□□□ -1.09
CCNA1-201ENST00000255465 DEFB104AQ8WTQ1 72 aa8.23□□□□□ -1.09
CCNA1-201ENST00000255465 C4orf3Q8WVX3 66 aa8.23□□□□□ -1.09
CCNA1-201ENST00000255465 OCR1Q9BZK8 76 aa8.23□□□□□ -1.09
CCNA1-201ENST00000255465 DEFB136Q30KP8 78 aa8.22□□□□□ -1.09
CCNA1-201ENST00000255465 LINC00242Q5T6M2 205 aa8.22□□□□□ -1.09
CCNA1-201ENST00000255465 CLEC19AQ6UXS0 136 aa8.22□□□□□ -1.09
CCNA1-201ENST00000255465 NOTCH3Q9UM47 2321 aa8.22□□□□□ -1.09
CCNA1-201ENST00000255465 TRBV10-1A0A0K0K1A3 114 aa8.21□□□□□ -1.09
CCNA1-201ENST00000255465 C8orf87E5RJ46 101 aa8.21□□□□□ -1.09
CCNA1-201ENST00000255465 CCL24O00175 119 aa8.21□□□□□ -1.09
CCNA1-201ENST00000255465 LCA10Q71F78 164 aa8.21□□□□□ -1.09
CCNA1-201ENST00000255465 NBEAL1Q6ZS30 2694 aa8.21□□□□□ -1.09
CCNA1-201ENST00000255465 LCE6AA0A183 80 aa8.21□□□□□ -1.1
CCNA1-201ENST00000255465 TRBV6-4A0A1B0GX49 114 aa8.21□□□□□ -1.1
CCNA1-201ENST00000255465 IGHV3-11P01762 117 aa8.2□□□□□ -1.1
CCNA1-201ENST00000255465 SLPIP03973 132 aa8.2□□□□□ -1.1
CCNA1-201ENST00000255465 C7orf65Q6ZTY9 151 aa8.2□□□□□ -1.1
CCNA1-201ENST00000255465 LINC00269Q8N2A0 174 aa8.19□□□□□ -1.1
CCNA1-201ENST00000255465 IGHV3-66A0A0C4DH42 116 aa8.19□□□□□ -1.1
CCNA1-201ENST00000255465 K7EQG2 157 aa8.19□□□□□ -1.1
CCNA1-201ENST00000255465 NTM-AS1Q6ZSK4 140 aa8.19□□□□□ -1.1
CCNA1-201ENST00000255465 C1orf64Q8NEQ6 169 aa8.19□□□□□ -1.1
CCNA1-201ENST00000255465 DIRC1Q969H9 104 aa8.19□□□□□ -1.1
CCNA1-201ENST00000255465 USMG5Q96IX5 58 aa8.19□□□□□ -1.1
CCNA1-201ENST00000255465 TRBV6-8A0A0A6YYG3 113 aa8.18□□□□□ -1.1
CCNA1-201ENST00000255465 A6NN06 94 aa8.18□□□□□ -1.1
CCNA1-201ENST00000255465 CCL18P55774 89 aa8.18□□□□□ -1.1
CCNA1-201ENST00000255465 COX6A2Q02221 97 aa8.18□□□□□ -1.1
CCNA1-201ENST00000255465 LIMD2Q9BT23 127 aa8.18□□□□□ -1.1
CCNA1-201ENST00000255465 IGHV3OR16-12A0A075B7B8 117 aa8.17□□□□□ -1.1
CCNA1-201ENST00000255465 H3BS24 57 aa8.17□□□□□ -1.1
CCNA1-201ENST00000255465 DEFB114Q30KQ6 69 aa8.17□□□□□ -1.1
CCNA1-201ENST00000255465 RNASE13Q5GAN3 156 aaKnown RBP8.17□□□□□ -1.1
CCNA1-201ENST00000255465 IGHV3OR16-8A0A075B7F1 116 aa8.17□□□□□ -1.1
CCNA1-201ENST00000255465 OXLD1Q5BKU9 147 aa8.17□□□□□ -1.1
CCNA1-201ENST00000255465 Q6ZTI0 123 aa8.17□□□□□ -1.1
CCNA1-201ENST00000255465 LINC00467Q9BRT7 94 aa8.17□□□□□ -1.1
CCNA1-201ENST00000255465 K7EQD1 137 aa8.16□□□□□ -1.1
CCNA1-201ENST00000255465 PSCAO43653 123 aa8.16□□□□□ -1.1
CCNA1-201ENST00000255465 VPREB1P12018 145 aa8.16□□□□□ -1.1
CCNA1-201ENST00000255465 IGHV3-35A0A0C4DH35 117 aa8.15□□□□□ -1.1
CCNA1-201ENST00000255465 PSPHP1O15172 72 aa8.15□□□□□ -1.1
CCNA1-201ENST00000255465 SLURP1P55000 103 aa8.15□□□□□ -1.1
CCNA1-201ENST00000255465 NOTCH1P46531 2555 aa8.15□□□□□ -1.11
CCNA1-201ENST00000255465 K7EMT4 169 aa8.15□□□□□ -1.11
CCNA1-201ENST00000255465 NDUFA4O00483 81 aa8.15□□□□□ -1.11
CCNA1-201ENST00000255465 Q5VV11 94 aa8.15□□□□□ -1.11
CCNA1-201ENST00000255465 COX7B2Q8TF08 81 aa8.15□□□□□ -1.11
CCNA1-201ENST00000255465 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.13□□□□□ -1.11
CCNA1-201ENST00000255465 ELOF1P60002 83 aaKnown RBP8.13□□□□□ -1.11
CCNA1-201ENST00000255465 C16orf90A8MZG2 172 aa8.13□□□□□ -1.11
CCNA1-201ENST00000255465 LINC00158P58513 81 aa8.13□□□□□ -1.11
CCNA1-201ENST00000255465 IGHV3OR16-13A0A075B7E8 117 aa8.12□□□□□ -1.11
CCNA1-201ENST00000255465 IGHV3-74A0A0B4J1X5 117 aa8.12□□□□□ -1.11
CCNA1-201ENST00000255465 LOC100131303A0A0U1RQF7 123 aa8.12□□□□□ -1.11
CCNA1-201ENST00000255465 KPRPQ5T749 579 aaPredicted RBP8.12□□□□□ -1.11
CCNA1-201ENST00000255465 SORL1Q92673 2214 aa8.12□□□□□ -1.11
CCNA1-201ENST00000255465 A8MUN3 132 aa8.11□□□□□ -1.11
CCNA1-201ENST00000255465 NDUFB1O75438 58 aa8.11□□□□□ -1.11
CCNA1-201ENST00000255465 ZCCHC13Q8WW36 166 aaKnown RBP8.11□□□□□ -1.11
CCNA1-201ENST00000255465 IGHV3-49A0A0A0MS15 119 aa8.1□□□□□ -1.11
CCNA1-201ENST00000255465 HIGD2AQ9BW72 106 aa8.1□□□□□ -1.11
CCNA1-201ENST00000255465 LINC00575Q6W349 94 aa8.09□□□□□ -1.11
CCNA1-201ENST00000255465 IGHV3-53P01767 116 aa8.09□□□□□ -1.12
CCNA1-201ENST00000255465 EGFEM1PQ0D2K5 195 aa8.09□□□□□ -1.12
CCNA1-201ENST00000255465 Q75L30 129 aa8.09□□□□□ -1.12
CCNA1-201ENST00000255465 MUC7Q8TAX7 377 aa8.09□□□□□ -1.12
CCNA1-201ENST00000255465 HCG22E2RYF7 251 aa8.08□□□□□ -1.12
CCNA1-201ENST00000255465 PRB2P02812 416 aaPredicted RBP8.08□□□□□ -1.12
CCNA1-201ENST00000255465 IGKV4-1P06312 121 aa8.08□□□□□ -1.12
CCNA1-201ENST00000255465 KRTAP10-11P60412 298 aa8.08□□□□□ -1.12
CCNA1-201ENST00000255465 NKAPP1Q8N9T2 125 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms