RNA–Protein interactions for RNA: ENST00000249910.5

MBD4-201, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MBD4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-201ENST00000249910 KIAA0087Q14695 138 aa10□□□□□ -0.81
MBD4-201ENST00000249910 LINC01620Q4KN68 170 aa10□□□□□ -0.81
MBD4-201ENST00000249910 Q8IZM0 81 aa10□□□□□ -0.81
MBD4-201ENST00000249910 LINC00337Q8N6G1 96 aa10□□□□□ -0.81
MBD4-201ENST00000249910 HUWE1Q7Z6Z7 4374 aaKnown RBP9.99□□□□□ -0.81
MBD4-201ENST00000249910 TEX49A0A1B0GTD5 131 aa9.99□□□□□ -0.81
MBD4-201ENST00000249910 ENHOQ6UWT2 76 aa9.99□□□□□ -0.81
MBD4-201ENST00000249910 UBE2WQ96B02 151 aa9.99□□□□□ -0.81
MBD4-201ENST00000249910 C6orf223Q8N319 242 aa9.99□□□□□ -0.81
MBD4-201ENST00000249910 COPS9Q8WXC6 57 aa9.99□□□□□ -0.81
MBD4-201ENST00000249910 LYSTQ99698 3801 aa9.99□□□□□ -0.81
MBD4-201ENST00000249910 DEFB121Q5J5C9 76 aa9.98□□□□□ -0.81
MBD4-201ENST00000249910 LINC00336Q6ZUF6 198 aa9.98□□□□□ -0.81
MBD4-201ENST00000249910 C11orf45Q8TAV5 145 aa9.98□□□□□ -0.81
MBD4-201ENST00000249910 COL7A1Q02388 2944 aa9.97□□□□□ -0.81
MBD4-201ENST00000249910 C2orf48Q96LS8 159 aa9.97□□□□□ -0.81
MBD4-201ENST00000249910 DEFB131BA0A096LNP1 70 aa9.97□□□□□ -0.81
MBD4-201ENST00000249910 ESRGQ1W209 222 aa9.97□□□□□ -0.81
MBD4-201ENST00000249910 PRR34Q9NV39 138 aa9.97□□□□□ -0.81
MBD4-201ENST00000249910 PRR3P79522 188 aaKnown RBP9.96□□□□□ -0.81
MBD4-201ENST00000249910 hADV29S1A0JD25 119 aa9.96□□□□□ -0.82
MBD4-201ENST00000249910 C10orf25Q5T742 122 aa9.96□□□□□ -0.82
MBD4-201ENST00000249910 DSCR8Q96T75 97 aa9.95□□□□□ -0.82
MBD4-201ENST00000249910 LST1O00453 97 aa9.95□□□□□ -0.82
MBD4-201ENST00000249910 CRPP02741 224 aa9.94□□□□□ -0.82
MBD4-201ENST00000249910 UNQ6190/PRO20217Q6UXQ8 127 aa9.94□□□□□ -0.82
MBD4-201ENST00000249910 K7EIL1 84 aa9.93□□□□□ -0.82
MBD4-201ENST00000249910 TRBV10-2A0A0K0K1G8 114 aa9.93□□□□□ -0.82
MBD4-201ENST00000249910 FAM218AQ96MZ4 157 aa9.93□□□□□ -0.82
MBD4-201ENST00000249910 TRAV13-2A0A0B4J235 113 aa9.92□□□□□ -0.82
MBD4-201ENST00000249910 SPAG11BQ08648 103 aa9.92□□□□□ -0.82
MBD4-201ENST00000249910 C1orf195Q5TG92 126 aa9.92□□□□□ -0.82
MBD4-201ENST00000249910 FAM236DA0A1B0GTK5 79 aa9.92□□□□□ -0.82
MBD4-201ENST00000249910 H3BNG1 76 aa9.92□□□□□ -0.82
MBD4-201ENST00000249910 FAM236CP0DP71 79 aa9.92□□□□□ -0.82
MBD4-201ENST00000249910 LINC01561Q8N1V8 128 aa9.92□□□□□ -0.82
MBD4-201ENST00000249910 SMIM11BQ8TCY0 68 aa9.91□□□□□ -0.82
MBD4-201ENST00000249910 CYSTM1Q9H1C7 97 aa9.91□□□□□ -0.82
MBD4-201ENST00000249910 TENM2Q9NT68 2774 aa9.9□□□□□ -0.82
MBD4-201ENST00000249910 Q8NDZ9 215 aa9.89□□□□□ -0.83
MBD4-201ENST00000249910 MDFIQ99750 246 aa9.89□□□□□ -0.83
MBD4-201ENST00000249910 ATOX1O00244 68 aa9.89□□□□□ -0.83
MBD4-201ENST00000249910 HIGD2BQ4VC39 106 aa9.88□□□□□ -0.83
MBD4-201ENST00000249910 Q9HAA7 133 aa9.88□□□□□ -0.83
MBD4-201ENST00000249910 ACYP1P07311 99 aa9.88□□□□□ -0.83
MBD4-201ENST00000249910 CXCL5P42830 114 aa9.88□□□□□ -0.83
MBD4-201ENST00000249910 RPL28P46779 137 aaKnown RBP9.88□□□□□ -0.83
MBD4-201ENST00000249910 LINC00643Q86TS7 51 aa9.87□□□□□ -0.83
MBD4-201ENST00000249910 TM2D3Q9BRN9 247 aa9.86□□□□□ -0.83
MBD4-201ENST00000249910 COX17Q14061 63 aa9.85□□□□□ -0.83
MBD4-201ENST00000249910 HIST1H4AP62805 103 aaKnown RBP9.85□□□□□ -0.83
MBD4-201ENST00000249910 A0A087WYN8 130 aa9.84□□□□□ -0.83
MBD4-201ENST00000249910 CSMD3Q7Z407 3707 aa9.84□□□□□ -0.83
MBD4-201ENST00000249910 H3BT86 120 aa9.84□□□□□ -0.83
MBD4-201ENST00000249910 KRTAP26-1Q6PEX3 210 aa9.84□□□□□ -0.83
MBD4-201ENST00000249910 NCR3O14931 201 aa9.83□□□□□ -0.84
MBD4-201ENST00000249910 UPK3BQ9BT76 320 aa9.83□□□□□ -0.84
MBD4-201ENST00000249910 XAGE1AQ9HD64 81 aa9.83□□□□□ -0.84
MBD4-201ENST00000249910 IGKV2D-24A0A075B6R9 120 aa9.83□□□□□ -0.84
MBD4-201ENST00000249910 C6orf48Q9UBA6 75 aa9.83□□□□□ -0.84
MBD4-201ENST00000249910 DNAH9Q9NYC9 4486 aa9.82□□□□□ -0.84
MBD4-201ENST00000249910 ZNF561-AS1K7EIQ3 104 aa9.81□□□□□ -0.84
MBD4-201ENST00000249910 TRAV10A0A0B4J240 114 aa9.81□□□□□ -0.84
MBD4-201ENST00000249910 LINC01556Q5JQF7 62 aa9.81□□□□□ -0.84
MBD4-201ENST00000249910 BAALC-AS2P0C853 105 aa9.8□□□□□ -0.84
MBD4-201ENST00000249910 LINC00588Q9Y4M8 146 aa9.8□□□□□ -0.84
MBD4-201ENST00000249910 C15orf56Q8N910 161 aa9.79□□□□□ -0.84
MBD4-201ENST00000249910 CAMK2N2Q96S95 79 aa9.79□□□□□ -0.84
MBD4-201ENST00000249910 DNAH10Q8IVF4 4471 aa9.79□□□□□ -0.84
MBD4-201ENST00000249910 EPM2AB3EWF7 344 aa9.79□□□□□ -0.84
MBD4-201ENST00000249910 LECT2O14960 151 aa9.79□□□□□ -0.84
MBD4-201ENST00000249910 SLPIP03973 132 aa9.79□□□□□ -0.84
MBD4-201ENST00000249910 SERP2Q8N6R1 65 aa9.79□□□□□ -0.84
MBD4-201ENST00000249910 SMCR5Q8TEV8 140 aa9.79□□□□□ -0.84
MBD4-201ENST00000249910 SDIM1Q6ZPB5 146 aa9.78□□□□□ -0.84
MBD4-201ENST00000249910 C22orf24Q9Y442 160 aa9.78□□□□□ -0.84
MBD4-201ENST00000249910 Q6ZRU5 148 aa9.78□□□□□ -0.84
MBD4-201ENST00000249910 DNHD1Q96M86 4753 aa9.77□□□□□ -0.84
MBD4-201ENST00000249910 NDUFC2-KCTD14E9PQ53 114 aa9.77□□□□□ -0.85
MBD4-201ENST00000249910 NDUFC2O95298 119 aa9.77□□□□□ -0.85
MBD4-201ENST00000249910 RPL18AQ02543 176 aaKnown RBP9.77□□□□□ -0.85
MBD4-201ENST00000249910 DNAH7Q8WXX0 4024 aa9.77□□□□□ -0.85
MBD4-201ENST00000249910 DNAL4O96015 105 aa9.76□□□□□ -0.85
MBD4-201ENST00000249910 DNAH10OSP0CZ25 163 aa9.76□□□□□ -0.85
MBD4-201ENST00000249910 S100A7L2Q5SY68 101 aa9.76□□□□□ -0.85
MBD4-201ENST00000249910 A0A0U1RQV1 116 aa9.75□□□□□ -0.85
MBD4-201ENST00000249910 H0YGX0 51 aa9.75□□□□□ -0.85
MBD4-201ENST00000249910 C9orf129Q5T035 196 aaKnown RBP9.75□□□□□ -0.85
MBD4-201ENST00000249910 DNAH1Q9P2D7 4330 aa9.75□□□□□ -0.85
MBD4-201ENST00000249910 C6orf99Q4VX62 202 aa9.75□□□□□ -0.85
MBD4-201ENST00000249910 FAM19A1Q7Z5A9 133 aa9.75□□□□□ -0.85
MBD4-201ENST00000249910 GVQW2A0A096LPI5 108 aaPredicted RBP9.74□□□□□ -0.85
MBD4-201ENST00000249910 CASC10Q5T4H9 136 aa9.74□□□□□ -0.85
MBD4-201ENST00000249910 SERP1Q9Y6X1 66 aa9.73□□□□□ -0.85
MBD4-201ENST00000249910 PRKDCP78527 4128 aaKnown RBP9.71□□□□□ -0.85
MBD4-201ENST00000249910 BRK1Q8WUW1 75 aa9.71□□□□□ -0.86
MBD4-201ENST00000249910 PLECQ15149 4684 aaKnown RBP9.7□□□□□ -0.86
MBD4-201ENST00000249910 Q6ZRP5 223 aa9.7□□□□□ -0.86
MBD4-201ENST00000249910 TRBV10-3A0A0K0K1G6 114 aa9.7□□□□□ -0.86
MBD4-201ENST00000249910 SMIM26A0A096LP01 95 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms