RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 SLPIP03973 132 aa12.23□□□□□ -0.45
TNFSF9-201ENST00000245817 COX6CP09669 75 aa12.23□□□□□ -0.45
TNFSF9-201ENST00000245817 UBE2V1Q13404 147 aa12.23□□□□□ -0.45
TNFSF9-201ENST00000245817 GAGE2EQ4V326 116 aa12.23□□□□□ -0.45
TNFSF9-201ENST00000245817 XAGE1AQ9HD64 81 aa12.23□□□□□ -0.45
TNFSF9-201ENST00000245817 GAGE2DQ9UEU5 116 aa12.23□□□□□ -0.45
TNFSF9-201ENST00000245817 ALMS1Q8TCU4 4167 aa12.23□□□□□ -0.45
TNFSF9-201ENST00000245817 WFDC2Q14508 124 aa12.22□□□□□ -0.45
TNFSF9-201ENST00000245817 K7EP34 96 aa12.22□□□□□ -0.45
TNFSF9-201ENST00000245817 RPL18AQ02543 176 aaKnown RBP12.22□□□□□ -0.45
TNFSF9-201ENST00000245817 LINC00337Q8N6G1 96 aa12.22□□□□□ -0.45
TNFSF9-201ENST00000245817 LINC00476Q8WZB0 136 aa12.22□□□□□ -0.45
TNFSF9-201ENST00000245817 DNAH1Q9P2D7 4330 aa12.22□□□□□ -0.45
TNFSF9-201ENST00000245817 TLX1NBP0CAT3 122 aa12.21□□□□□ -0.45
TNFSF9-201ENST00000245817 Q6ZR54 194 aa12.21□□□□□ -0.45
TNFSF9-201ENST00000245817 Q6ZRN7 208 aaPredicted RBP12.2□□□□□ -0.46
TNFSF9-201ENST00000245817 Q6ZRP5 223 aa12.2□□□□□ -0.46
TNFSF9-201ENST00000245817 KMT2AQ03164 3969 aa12.2□□□□□ -0.46
TNFSF9-201ENST00000245817 CNBPP62633 177 aaKnown RBP12.19□□□□□ -0.46
TNFSF9-201ENST00000245817 PRR3P79522 188 aaKnown RBP12.19□□□□□ -0.46
TNFSF9-201ENST00000245817 SACSQ9NZJ4 4579 aa12.19□□□□□ -0.46
TNFSF9-201ENST00000245817 LOC107984640A0A0U1RRK4 108 aa12.18□□□□□ -0.46
TNFSF9-201ENST00000245817 NCR3O14931 201 aa12.18□□□□□ -0.46
TNFSF9-201ENST00000245817 TRIAP1O43715 76 aa12.18□□□□□ -0.46
TNFSF9-201ENST00000245817 C1orf134Q5TEV5 83 aa12.18□□□□□ -0.46
TNFSF9-201ENST00000245817 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.17□□□□□ -0.46
TNFSF9-201ENST00000245817 TRBV20-1A0A075B6N2 111 aa12.17□□□□□ -0.46
TNFSF9-201ENST00000245817 LRCOL1A6NCL2 159 aa12.17□□□□□ -0.46
TNFSF9-201ENST00000245817 S100A7L2Q5SY68 101 aa12.17□□□□□ -0.46
TNFSF9-201ENST00000245817 TMEM126AQ9H061 195 aa12.17□□□□□ -0.46
TNFSF9-201ENST00000245817 TRBV10-2A0A0K0K1G8 114 aa12.15□□□□□ -0.46
TNFSF9-201ENST00000245817 LCE6AA0A183 80 aa12.15□□□□□ -0.46
TNFSF9-201ENST00000245817 GAGE2BQ13066 116 aa12.15□□□□□ -0.46
TNFSF9-201ENST00000245817 KMT2CQ8NEZ4 4911 aaKnown RBP12.14□□□□□ -0.47
TNFSF9-201ENST00000245817 RPL28P46779 137 aaKnown RBP12.13□□□□□ -0.47
TNFSF9-201ENST00000245817 Q8NDZ9 215 aa12.13□□□□□ -0.47
TNFSF9-201ENST00000245817 SMIM11BQ8TCY0 68 aa12.13□□□□□ -0.47
TNFSF9-201ENST00000245817 HYDINQ4G0P3 5121 aa12.12□□□□□ -0.47
TNFSF9-201ENST00000245817 H3BMG7 143 aa12.12□□□□□ -0.47
TNFSF9-201ENST00000245817 TCL1BO95988 128 aa12.12□□□□□ -0.47
TNFSF9-201ENST00000245817 C9orf129Q5T035 196 aaKnown RBP12.12□□□□□ -0.47
TNFSF9-201ENST00000245817 PKIGQ9Y2B9 76 aa12.12□□□□□ -0.47
TNFSF9-201ENST00000245817 DNAH6Q9C0G6 4158 aa12.11□□□□□ -0.47
TNFSF9-201ENST00000245817 VPREB1P12018 145 aa12.11□□□□□ -0.47
TNFSF9-201ENST00000245817 ATXN8Q156A1 80 aa12.11□□□□□ -0.47
TNFSF9-201ENST00000245817 Q8N814 137 aa12.11□□□□□ -0.47
TNFSF9-201ENST00000245817 A0A087WTM6 91 aa12.1□□□□□ -0.47
TNFSF9-201ENST00000245817 M0R378 163 aa12.1□□□□□ -0.47
TNFSF9-201ENST00000245817 NKAPP1Q8N9T2 125 aa12.1□□□□□ -0.47
TNFSF9-201ENST00000245817 PLA2G2DQ9UNK4 145 aa12.07□□□□□ -0.48
TNFSF9-201ENST00000245817 C16orf90A8MZG2 172 aa12.06□□□□□ -0.48
TNFSF9-201ENST00000245817 IGLV6-57P01721 117 aa12.06□□□□□ -0.48
TNFSF9-201ENST00000245817 C9orf163Q8N9P6 203 aa12.06□□□□□ -0.48
TNFSF9-201ENST00000245817 CLEC2BQ92478 149 aa12.06□□□□□ -0.48
TNFSF9-201ENST00000245817 CBY1Q9Y3M2 126 aa12.06□□□□□ -0.48
TNFSF9-201ENST00000245817 H0YGX0 51 aa12.06□□□□□ -0.48
TNFSF9-201ENST00000245817 TRBV10-3A0A0K0K1G6 114 aa12.05□□□□□ -0.48
TNFSF9-201ENST00000245817 IGKV2-24A0A0C4DH68 120 aa12.03□□□□□ -0.48
TNFSF9-201ENST00000245817 F8W1H4 67 aa12.03□□□□□ -0.48
TNFSF9-201ENST00000245817 SERTAD4-AS1Q5TG53 156 aa12.03□□□□□ -0.48
TNFSF9-201ENST00000245817 A0A096LNI7 61 aa12.03□□□□□ -0.48
TNFSF9-201ENST00000245817 LST1O00453 97 aa12.03□□□□□ -0.48
TNFSF9-201ENST00000245817 TRAV23DV6A0A075B6W5 121 aa12.02□□□□□ -0.49
TNFSF9-201ENST00000245817 IGLV5-37A0A075B6J1 123 aa12□□□□□ -0.49
TNFSF9-201ENST00000245817 FAM168BA1KXE4 195 aa12□□□□□ -0.49
TNFSF9-201ENST00000245817 LINC01620Q4KN68 170 aa12□□□□□ -0.49
TNFSF9-201ENST00000245817 C6orf99Q4VX62 202 aa12□□□□□ -0.49
TNFSF9-201ENST00000245817 FAM19A5Q7Z5A7 132 aaPredicted RBP12□□□□□ -0.49
TNFSF9-201ENST00000245817 LINC00474Q9P2X8 69 aa12□□□□□ -0.49
TNFSF9-201ENST00000245817 DNAH2Q9P225 4427 aa12□□□□□ -0.49
TNFSF9-201ENST00000245817 RYR2Q92736 4967 aa12□□□□□ -0.49
TNFSF9-201ENST00000245817 C9JAW5 83 aa11.99□□□□□ -0.49
TNFSF9-201ENST00000245817 SNCGO76070 127 aa11.99□□□□□ -0.49
TNFSF9-201ENST00000245817 MTURNQ8N3F0 131 aa11.99□□□□□ -0.49
TNFSF9-201ENST00000245817 C7orf33Q8WU49 177 aa11.98□□□□□ -0.49
TNFSF9-201ENST00000245817 DIRC1Q969H9 104 aa11.98□□□□□ -0.49
TNFSF9-201ENST00000245817 C22orf24Q9Y442 160 aa11.98□□□□□ -0.49
TNFSF9-201ENST00000245817 DNAH10Q8IVF4 4471 aa11.98□□□□□ -0.49
TNFSF9-201ENST00000245817 RTL8CO15255 209 aa11.97□□□□□ -0.49
TNFSF9-201ENST00000245817 SDIM1Q6ZPB5 146 aa11.97□□□□□ -0.49
TNFSF9-201ENST00000245817 ZNF73O43830 326 aaPredicted RBP11.97□□□□□ -0.49
TNFSF9-201ENST00000245817 TRACP01848 142 aa11.97□□□□□ -0.49
TNFSF9-201ENST00000245817 DNAL4O96015 105 aa11.96□□□□□ -0.5
TNFSF9-201ENST00000245817 TNP2Q05952 138 aa11.96□□□□□ -0.5
TNFSF9-201ENST00000245817 MRPL55Q7Z7F7 128 aaKnown RBP11.96□□□□□ -0.5
TNFSF9-201ENST00000245817 DPH3Q96FX2 82 aa11.96□□□□□ -0.5
TNFSF9-201ENST00000245817 FAM218AQ96MZ4 157 aa11.96□□□□□ -0.5
TNFSF9-201ENST00000245817 IGLV5-52A0A0A0MRZ9 124 aa11.95□□□□□ -0.5
TNFSF9-201ENST00000245817 SLC25A20O43772 301 aa11.95□□□□□ -0.5
TNFSF9-201ENST00000245817 PRO0461Q9UI25 63 aa11.95□□□□□ -0.5
TNFSF9-201ENST00000245817 RYR3Q15413 4870 aa11.94□□□□□ -0.5
TNFSF9-201ENST00000245817 A0A087WYN8 130 aa11.94□□□□□ -0.5
TNFSF9-201ENST00000245817 M0QXV9 152 aa11.94□□□□□ -0.5
TNFSF9-201ENST00000245817 CHTF8P0CG12 524 aa11.94□□□□□ -0.5
TNFSF9-201ENST00000245817 LINC00167Q96N53 147 aa11.94□□□□□ -0.5
TNFSF9-201ENST00000245817 KRTAP7-1Q8IUC3 87 aa11.93□□□□□ -0.5
TNFSF9-201ENST00000245817 KCNQ1DNQ9H478 68 aa11.93□□□□□ -0.5
TNFSF9-201ENST00000245817 A0A1B0GX51 115 aa11.92□□□□□ -0.5
TNFSF9-201ENST00000245817 RPL37AP8A6NKH3 93 aa11.92□□□□□ -0.5
TNFSF9-201ENST00000245817 IGLV1-50A0A075B6I6 118 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms