RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 ZNF843Q8N446 348 aa9.8□□□□□ -0.84
PCDHB3-201ENST00000231130 IGHV4-31P0DP07 118 aa9.8□□□□□ -0.84
PCDHB3-201ENST00000231130 TRBV10-3A0A0K0K1G6 114 aa9.8□□□□□ -0.84
PCDHB3-201ENST00000231130 GYPEP15421 78 aa9.79□□□□□ -0.84
PCDHB3-201ENST00000231130 DEFB4AO15263 64 aa9.78□□□□□ -0.84
PCDHB3-201ENST00000231130 DSCR9P59020 149 aa9.78□□□□□ -0.84
PCDHB3-201ENST00000231130 LINC00269Q8N2A0 174 aa9.78□□□□□ -0.84
PCDHB3-201ENST00000231130 NREPQ16612 68 aa9.78□□□□□ -0.84
PCDHB3-201ENST00000231130 Q8N9L7 120 aa9.78□□□□□ -0.84
PCDHB3-201ENST00000231130 TMEM254Q8TBM7 123 aa9.78□□□□□ -0.84
PCDHB3-201ENST00000231130 EPM2AB3EWF7 344 aa9.77□□□□□ -0.84
PCDHB3-201ENST00000231130 GIG44P09565 113 aaPredicted RBP9.77□□□□□ -0.84
PCDHB3-201ENST00000231130 FUSP35637 526 aaKnown RBP eCLIP9.77□□□□□ -0.85
PCDHB3-201ENST00000231130 C16orf74Q96GX8 76 aa9.77□□□□□ -0.85
PCDHB3-201ENST00000231130 NDUFC1O43677 76 aa9.77□□□□□ -0.85
PCDHB3-201ENST00000231130 PLAC8L1A1L4L8 177 aa9.76□□□□□ -0.85
PCDHB3-201ENST00000231130 PMAIP1Q13794 54 aa9.75□□□□□ -0.85
PCDHB3-201ENST00000231130 RETNQ9HD89 108 aa9.75□□□□□ -0.85
PCDHB3-201ENST00000231130 A0A096LNT2 108 aa9.74□□□□□ -0.85
PCDHB3-201ENST00000231130 BPY2O14599 106 aa9.74□□□□□ -0.85
PCDHB3-201ENST00000231130 Q6ZQT0 140 aa9.74□□□□□ -0.85
PCDHB3-201ENST00000231130 ANGP03950 147 aaKnown RBP9.74□□□□□ -0.85
PCDHB3-201ENST00000231130 PSPHP1O15172 72 aa9.73□□□□□ -0.85
PCDHB3-201ENST00000231130 ESRGQ1W209 222 aa9.73□□□□□ -0.85
PCDHB3-201ENST00000231130 Q6ZQY7 126 aa9.73□□□□□ -0.85
PCDHB3-201ENST00000231130 NANOS2P60321 138 aaKnown RBP9.72□□□□□ -0.85
PCDHB3-201ENST00000231130 BBC3Q96PG8 261 aaPredicted RBP9.72□□□□□ -0.85
PCDHB3-201ENST00000231130 C6orf223Q8N319 242 aa9.71□□□□□ -0.86
PCDHB3-201ENST00000231130 HTN3P15516 51 aa9.71□□□□□ -0.86
PCDHB3-201ENST00000231130 ATP5EP56381 51 aaPredicted RBP9.71□□□□□ -0.86
PCDHB3-201ENST00000231130 PRR4Q16378 134 aa9.71□□□□□ -0.86
PCDHB3-201ENST00000231130 SPATA3Q8NHX4 192 aa9.71□□□□□ -0.86
PCDHB3-201ENST00000231130 DNAJC9-AS1A6NH13 148 aa9.7□□□□□ -0.86
PCDHB3-201ENST00000231130 Q8NDZ9 215 aa9.7□□□□□ -0.86
PCDHB3-201ENST00000231130 ZNF561-AS1K7EIQ3 104 aa9.69□□□□□ -0.86
PCDHB3-201ENST00000231130 HIGD2AQ9BW72 106 aa9.69□□□□□ -0.86
PCDHB3-201ENST00000231130 PRYO14603 147 aa9.68□□□□□ -0.86
PCDHB3-201ENST00000231130 CHCHD10Q8WYQ3 142 aaPredicted RBP9.68□□□□□ -0.86
PCDHB3-201ENST00000231130 BCE1O60756 84 aa9.68□□□□□ -0.86
PCDHB3-201ENST00000231130 FSHBP01225 129 aa9.67□□□□□ -0.86
PCDHB3-201ENST00000231130 CELA1Q9UNI1 258 aa9.67□□□□□ -0.86
PCDHB3-201ENST00000231130 UNC79Q9P2D8 2635 aa9.67□□□□□ -0.86
PCDHB3-201ENST00000231130 UNQ6190/PRO20217Q6UXQ8 127 aa9.67□□□□□ -0.86
PCDHB3-201ENST00000231130 XAGE1AQ9HD64 81 aa9.67□□□□□ -0.86
PCDHB3-201ENST00000231130 TRBV7-4A0A0J9YYF1 115 aa9.67□□□□□ -0.86
PCDHB3-201ENST00000231130 C10orf25Q5T742 122 aa9.67□□□□□ -0.86
PCDHB3-201ENST00000231130 Q8IZM0 81 aa9.67□□□□□ -0.86
PCDHB3-201ENST00000231130 USP24Q9UPU5 2620 aa9.66□□□□□ -0.86
PCDHB3-201ENST00000231130 VWFP04275 2813 aa9.66□□□□□ -0.86
PCDHB3-201ENST00000231130 F8P00451 2351 aa9.66□□□□□ -0.86
PCDHB3-201ENST00000231130 LINC01006Q8NI28 216 aa9.66□□□□□ -0.86
PCDHB3-201ENST00000231130 LY6G6DO95868 133 aa9.66□□□□□ -0.86
PCDHB3-201ENST00000231130 LINC00575Q6W349 94 aa9.66□□□□□ -0.86
PCDHB3-201ENST00000231130 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.65□□□□□ -0.86
PCDHB3-201ENST00000231130 CSNK1G2-AS1Q8NCQ2 148 aa9.64□□□□□ -0.87
PCDHB3-201ENST00000231130 MUC7Q8TAX7 377 aa9.64□□□□□ -0.87
PCDHB3-201ENST00000231130 CXCL6P80162 114 aa9.64□□□□□ -0.87
PCDHB3-201ENST00000231130 REG3AQ06141 175 aa9.64□□□□□ -0.87
PCDHB3-201ENST00000231130 FAM30AQ9NZY2 134 aa9.63□□□□□ -0.87
PCDHB3-201ENST00000231130 IGHV4-28A0A0C4DH34 117 aa9.62□□□□□ -0.87
PCDHB3-201ENST00000231130 LINC00167Q96N53 147 aa9.62□□□□□ -0.87
PCDHB3-201ENST00000231130 DEFB113Q30KQ7 82 aa9.62□□□□□ -0.87
PCDHB3-201ENST00000231130 ITPR2Q14571 2701 aa9.61□□□□□ -0.87
PCDHB3-201ENST00000231130 KIAA0087Q14695 138 aa9.61□□□□□ -0.87
PCDHB3-201ENST00000231130 C3orf84H3BNL1 204 aa9.61□□□□□ -0.87
PCDHB3-201ENST00000231130 SPAG11BQ08648 103 aa9.61□□□□□ -0.87
PCDHB3-201ENST00000231130 C19orf73Q9NVV2 129 aa9.61□□□□□ -0.87
PCDHB3-201ENST00000231130 PRO0255Q9UI72 69 aa9.61□□□□□ -0.87
PCDHB3-201ENST00000231130 CD164L2Q6UWJ8 174 aa9.6□□□□□ -0.87
PCDHB3-201ENST00000231130 LOC110117498A0A087WWA1 95 aa9.6□□□□□ -0.87
PCDHB3-201ENST00000231130 DEFB135Q30KP9 77 aa9.6□□□□□ -0.87
PCDHB3-201ENST00000231130 KLK12Q9UKR0 248 aa9.59□□□□□ -0.87
PCDHB3-201ENST00000231130 IGLV1-51P01701 117 aa9.59□□□□□ -0.87
PCDHB3-201ENST00000231130 PDE6GP18545 87 aa9.59□□□□□ -0.87
PCDHB3-201ENST00000231130 CYSRT1A8MQ03 144 aa9.58□□□□□ -0.88
PCDHB3-201ENST00000231130 SPTSSBQ8NFR3 76 aa9.57□□□□□ -0.88
PCDHB3-201ENST00000231130 ATRQ13535 2644 aa9.57□□□□□ -0.88
PCDHB3-201ENST00000231130 A0A1B0GUV1 79 aa9.57□□□□□ -0.88
PCDHB3-201ENST00000231130 UBR5O95071 2799 aaPredicted RBP9.56□□□□□ -0.88
PCDHB3-201ENST00000231130 TEP1Q99973 2627 aaKnown RBP9.55□□□□□ -0.88
PCDHB3-201ENST00000231130 CMC4P56277 68 aaPredicted RBP9.55□□□□□ -0.88
PCDHB3-201ENST00000231130 HIGD2BQ4VC39 106 aa9.55□□□□□ -0.88
PCDHB3-201ENST00000231130 MRPL55Q7Z7F7 128 aaKnown RBP9.55□□□□□ -0.88
PCDHB3-201ENST00000231130 DEFB105AQ8NG35 78 aa9.54□□□□□ -0.88
PCDHB3-201ENST00000231130 Q6ZTC4 211 aa9.54□□□□□ -0.88
PCDHB3-201ENST00000231130 FASNP49327 2511 aaKnown RBP9.54□□□□□ -0.88
PCDHB3-201ENST00000231130 COX17Q14061 63 aa9.53□□□□□ -0.88
PCDHB3-201ENST00000231130 PRR15Q8IV56 129 aa9.52□□□□□ -0.88
PCDHB3-201ENST00000231130 C1orf64Q8NEQ6 169 aa9.52□□□□□ -0.88
PCDHB3-201ENST00000231130 DIRC1Q969H9 104 aa9.52□□□□□ -0.89
PCDHB3-201ENST00000231130 A8MUN3 132 aa9.51□□□□□ -0.89
PCDHB3-201ENST00000231130 Q6ZRP5 223 aa9.51□□□□□ -0.89
PCDHB3-201ENST00000231130 X6R8D5 127 aa9.51□□□□□ -0.89
PCDHB3-201ENST00000231130 SMIM29Q86T20 159 aa9.5□□□□□ -0.89
PCDHB3-201ENST00000231130 PKD1L1Q8TDX9 2849 aa9.5□□□□□ -0.89
PCDHB3-201ENST00000231130 HIVEP1P15822 2718 aa9.5□□□□□ -0.89
PCDHB3-201ENST00000231130 A8MU10 97 aa9.49□□□□□ -0.89
PCDHB3-201ENST00000231130 OCR1Q9BZK8 76 aa9.49□□□□□ -0.89
PCDHB3-201ENST00000231130 COX7BP24311 80 aa9.49□□□□□ -0.89
PCDHB3-201ENST00000231130 PDZD2O15018 2839 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms