RNA–Protein interactions for RNA: ENST00000229307.8

NANOG-201, Transcript of Nanog homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NANOG, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOG-201ENST00000229307 TEN1Q86WV5 123 aa5.51□□□□□ -1.53
NANOG-201ENST00000229307 C9orf116Q5BN46 136 aaPredicted RBP5.51□□□□□ -1.53
NANOG-201ENST00000229307 BPY2O14599 106 aa5.51□□□□□ -1.53
NANOG-201ENST00000229307 AGRNO00468 2067 aa5.51□□□□□ -1.53
NANOG-201ENST00000229307 ITPR2Q14571 2701 aa5.5□□□□□ -1.53
NANOG-201ENST00000229307 ZZEF1O43149 2961 aa5.5□□□□□ -1.53
NANOG-201ENST00000229307 PLA2G1BP04054 148 aaKnown RBP5.5□□□□□ -1.53
NANOG-201ENST00000229307 Q6ZQY7 126 aa5.5□□□□□ -1.53
NANOG-201ENST00000229307 CR1P17927 2039 aa5.5□□□□□ -1.53
NANOG-201ENST00000229307 FREM2Q5SZK8 3169 aa5.5□□□□□ -1.53
NANOG-201ENST00000229307 NTM-AS1Q6ZSK4 140 aa5.5□□□□□ -1.53
NANOG-201ENST00000229307 TRBV10-3A0A0K0K1G6 114 aa5.5□□□□□ -1.53
NANOG-201ENST00000229307 Q6JHZ5 121 aa5.5□□□□□ -1.53
NANOG-201ENST00000229307 TENM4Q6N022 2769 aa5.5□□□□□ -1.53
NANOG-201ENST00000229307 SMIM11BQ8TCY0 68 aa5.5□□□□□ -1.53
NANOG-201ENST00000229307 SETD2Q9BYW2 2564 aaPredicted RBP5.49□□□□□ -1.53
NANOG-201ENST00000229307 DMDP11532 3685 aa5.48□□□□□ -1.53
NANOG-201ENST00000229307 LINC01546A6NGU7 62 aa5.48□□□□□ -1.53
NANOG-201ENST00000229307 C14orf132Q9NPU4 83 aa5.48□□□□□ -1.53
NANOG-201ENST00000229307 TEX15Q9BXT5 2789 aa5.48□□□□□ -1.53
NANOG-201ENST00000229307 TEX49A0A1B0GTD5 131 aa5.48□□□□□ -1.53
NANOG-201ENST00000229307 TRIAP1O43715 76 aa5.48□□□□□ -1.53
NANOG-201ENST00000229307 CDIP1Q9H305 208 aa5.48□□□□□ -1.53
NANOG-201ENST00000229307 CCKP06307 115 aa5.48□□□□□ -1.53
NANOG-201ENST00000229307 IGHV3OR16-9A0A0B4J2B5 98 aa5.47□□□□□ -1.53
NANOG-201ENST00000229307 LIMD2Q9BT23 127 aa5.47□□□□□ -1.53
NANOG-201ENST00000229307 C22orf24Q9Y442 160 aa5.47□□□□□ -1.53
NANOG-201ENST00000229307 WIPF1O43516 503 aa5.47□□□□□ -1.53
NANOG-201ENST00000229307 V9GYY9 64 aa5.47□□□□□ -1.53
NANOG-201ENST00000229307 HIVEP1P15822 2718 aa5.47□□□□□ -1.53
NANOG-201ENST00000229307 SLPIP03973 132 aa5.47□□□□□ -1.53
NANOG-201ENST00000229307 URB1-AS1Q96HZ7 61 aa5.47□□□□□ -1.53
NANOG-201ENST00000229307 HRCT1Q6UXD1 115 aa5.46□□□□□ -1.53
NANOG-201ENST00000229307 CIRBP-AS1Q8TBR5 109 aa5.46□□□□□ -1.53
NANOG-201ENST00000229307 DSCAML1Q8TD84 2053 aa5.46□□□□□ -1.53
NANOG-201ENST00000229307 GVQW2A0A096LPI5 108 aaPredicted RBP5.46□□□□□ -1.54
NANOG-201ENST00000229307 SPINK6Q6UWN8 80 aa5.46□□□□□ -1.54
NANOG-201ENST00000229307 Q6ZRP5 223 aa5.46□□□□□ -1.54
NANOG-201ENST00000229307 LINC00612Q8N6U2 182 aa5.46□□□□□ -1.54
NANOG-201ENST00000229307 ATRQ13535 2644 aa5.46□□□□□ -1.54
NANOG-201ENST00000229307 NBEAQ8NFP9 2946 aa5.46□□□□□ -1.54
NANOG-201ENST00000229307 IGLV5-39A0A0G2JS06 123 aa5.45□□□□□ -1.54
NANOG-201ENST00000229307 FAM236AA0A1B0GUQ0 79 aa5.45□□□□□ -1.54
NANOG-201ENST00000229307 FAM236BA0A1B0GV22 79 aa5.45□□□□□ -1.54
NANOG-201ENST00000229307 CHKB-CPT1BH3BT56 60 aa5.45□□□□□ -1.54
NANOG-201ENST00000229307 ATP5EP2Q5VTU8 51 aa5.45□□□□□ -1.54
NANOG-201ENST00000229307 APCP25054 2843 aa5.45□□□□□ -1.54
NANOG-201ENST00000229307 ENHOQ6UWT2 76 aa5.44□□□□□ -1.54
NANOG-201ENST00000229307 WDFY3Q8IZQ1 3526 aa5.44□□□□□ -1.54
NANOG-201ENST00000229307 SEC61GP60059 68 aa5.44□□□□□ -1.54
NANOG-201ENST00000229307 LST1O00453 97 aa5.44□□□□□ -1.54
NANOG-201ENST00000229307 GIG44P09565 113 aaPredicted RBP5.44□□□□□ -1.54
NANOG-201ENST00000229307 Q9BRP9 147 aa5.44□□□□□ -1.54
NANOG-201ENST00000229307 IGKV3D-7A0A0C4DH55 119 aa5.44□□□□□ -1.54
NANOG-201ENST00000229307 IGKV4-1P06312 121 aa5.44□□□□□ -1.54
NANOG-201ENST00000229307 APLNQ9ULZ1 77 aa5.44□□□□□ -1.54
NANOG-201ENST00000229307 IGLV5-45A0A087WSX0 123 aa5.43□□□□□ -1.54
NANOG-201ENST00000229307 C6orf48Q9UBA6 75 aa5.43□□□□□ -1.54
NANOG-201ENST00000229307 C3orf22Q8N5N4 141 aa5.43□□□□□ -1.54
NANOG-201ENST00000229307 A0A096LNJ9 63 aa5.42□□□□□ -1.54
NANOG-201ENST00000229307 Q8N814 137 aa5.42□□□□□ -1.54
NANOG-201ENST00000229307 TSPEAR-AS2P59090 65 aa5.42□□□□□ -1.54
NANOG-201ENST00000229307 LINC00643Q86TS7 51 aa5.42□□□□□ -1.54
NANOG-201ENST00000229307 ATMQ13315 3056 aa5.42□□□□□ -1.54
NANOG-201ENST00000229307 COL12A1Q99715 3063 aa5.42□□□□□ -1.54
NANOG-201ENST00000229307 UQCRQO14949 82 aa5.41□□□□□ -1.54
NANOG-201ENST00000229307 RPL37AP61513 92 aaKnown RBP5.41□□□□□ -1.54
NANOG-201ENST00000229307 SMCR5Q8TEV8 140 aa5.41□□□□□ -1.54
NANOG-201ENST00000229307 ATOX1O00244 68 aa5.41□□□□□ -1.54
NANOG-201ENST00000229307 J3QL48 77 aa5.41□□□□□ -1.54
NANOG-201ENST00000229307 Q6Q795 121 aa5.41□□□□□ -1.54
NANOG-201ENST00000229307 PRR3P79522 188 aaKnown RBP5.4□□□□□ -1.54
NANOG-201ENST00000229307 LINC00167Q96N53 147 aa5.4□□□□□ -1.54
NANOG-201ENST00000229307 COL6A5A8TX70 2615 aa5.4□□□□□ -1.55
NANOG-201ENST00000229307 LINC00337Q8N6G1 96 aa5.4□□□□□ -1.55
NANOG-201ENST00000229307 PRLHP81277 87 aa5.4□□□□□ -1.55
NANOG-201ENST00000229307 CRYGAP11844 174 aa5.39□□□□□ -1.55
NANOG-201ENST00000229307 ADAMTSL4-AS1Q5T5F5 129 aa5.39□□□□□ -1.55
NANOG-201ENST00000229307 SPEGQ15772 3267 aa5.39□□□□□ -1.55
NANOG-201ENST00000229307 TRBV7-6A0A0J9YX20 115 aa5.39□□□□□ -1.55
NANOG-201ENST00000229307 CASC2Q6XLA1 102 aa5.39□□□□□ -1.55
NANOG-201ENST00000229307 A0A087WTM6 91 aa5.39□□□□□ -1.55
NANOG-201ENST00000229307 A0A0U1RQV1 116 aa5.39□□□□□ -1.55
NANOG-201ENST00000229307 LINC00476Q8WZB0 136 aa5.38□□□□□ -1.55
NANOG-201ENST00000229307 STAB1Q9NY15 2570 aa5.38□□□□□ -1.55
NANOG-201ENST00000229307 Q8N3U1 123 aa5.38□□□□□ -1.55
NANOG-201ENST00000229307 CELSR3Q9NYQ7 3312 aa5.38□□□□□ -1.55
NANOG-201ENST00000229307 C1orf195Q5TG92 126 aa5.37□□□□□ -1.55
NANOG-201ENST00000229307 LINC00575Q6W349 94 aa5.37□□□□□ -1.55
NANOG-201ENST00000229307 PRR34Q9NV39 138 aa5.37□□□□□ -1.55
NANOG-201ENST00000229307 Q9UF83 564 aa5.37□□□□□ -1.55
NANOG-201ENST00000229307 PHF5AQ7RTV0 110 aaKnown RBP5.37□□□□□ -1.55
NANOG-201ENST00000229307 CASC10Q5T4H9 136 aa5.37□□□□□ -1.55
NANOG-201ENST00000229307 FAM19A3Q7Z5A8 133 aa5.37□□□□□ -1.55
NANOG-201ENST00000229307 BRK1Q8WUW1 75 aa5.37□□□□□ -1.55
NANOG-201ENST00000229307 BCE1O60756 84 aa5.36□□□□□ -1.55
NANOG-201ENST00000229307 C4orf26Q17RF5 130 aa5.36□□□□□ -1.55
NANOG-201ENST00000229307 PRO0461Q9UI25 63 aa5.36□□□□□ -1.55
NANOG-201ENST00000229307 BOD1L1Q8NFC6 3051 aa5.35□□□□□ -1.55
NANOG-201ENST00000229307 UTP20O75691 2785 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms