RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 MXRA5Q9NR99 2828 aa9.82□□□□□ -0.84
SHPK-201ENST00000225519 M0R2N4 97 aa9.81□□□□□ -0.84
SHPK-201ENST00000225519 PLAC8L1A1L4L8 177 aa9.81□□□□□ -0.84
SHPK-201ENST00000225519 ANGP03950 147 aaKnown RBP9.81□□□□□ -0.84
SHPK-201ENST00000225519 LINC00336Q6ZUF6 198 aa9.81□□□□□ -0.84
SHPK-201ENST00000225519 Q8N3U1 123 aa9.8□□□□□ -0.84
SHPK-201ENST00000225519 SMIM26A0A096LP01 95 aa9.8□□□□□ -0.84
SHPK-201ENST00000225519 CSMD2Q7Z408 3487 aa9.79□□□□□ -0.84
SHPK-201ENST00000225519 CMC4P56277 68 aaPredicted RBP9.79□□□□□ -0.84
SHPK-201ENST00000225519 PRO0628Q9UI54 55 aa9.79□□□□□ -0.84
SHPK-201ENST00000225519 GIG44P09565 113 aaPredicted RBP9.79□□□□□ -0.84
SHPK-201ENST00000225519 CHCHD10Q8WYQ3 142 aaPredicted RBP9.79□□□□□ -0.84
SHPK-201ENST00000225519 NIPBLQ6KC79 2804 aaeCLIP9.79□□□□□ -0.84
SHPK-201ENST00000225519 KMT2BQ9UMN6 2715 aaPredicted RBP9.78□□□□□ -0.84
SHPK-201ENST00000225519 COX17Q14061 63 aa9.78□□□□□ -0.84
SHPK-201ENST00000225519 LINC00482Q8N8I6 264 aa9.78□□□□□ -0.84
SHPK-201ENST00000225519 IGHV4-31P0DP07 118 aa9.77□□□□□ -0.84
SHPK-201ENST00000225519 FBN2P35556 2912 aa9.77□□□□□ -0.84
SHPK-201ENST00000225519 BCE1O60756 84 aa9.77□□□□□ -0.85
SHPK-201ENST00000225519 KLKP1Q107X0 134 aa9.77□□□□□ -0.85
SHPK-201ENST00000225519 CD164L2Q6UWJ8 174 aa9.76□□□□□ -0.85
SHPK-201ENST00000225519 PDE6GP18545 87 aa9.76□□□□□ -0.85
SHPK-201ENST00000225519 LOC110117498A0A087WWA1 95 aa9.76□□□□□ -0.85
SHPK-201ENST00000225519 C6orf223Q8N319 242 aa9.76□□□□□ -0.85
SHPK-201ENST00000225519 TM2D3Q9BRN9 247 aa9.75□□□□□ -0.85
SHPK-201ENST00000225519 A0A1B0GUV1 79 aa9.75□□□□□ -0.85
SHPK-201ENST00000225519 BRK1Q8WUW1 75 aa9.74□□□□□ -0.85
SHPK-201ENST00000225519 ESM1Q9NQ30 184 aa9.74□□□□□ -0.85
SHPK-201ENST00000225519 MIFP14174 115 aa9.74□□□□□ -0.85
SHPK-201ENST00000225519 SPAG11BQ08648 103 aa9.74□□□□□ -0.85
SHPK-201ENST00000225519 UNQ6190/PRO20217Q6UXQ8 127 aa9.74□□□□□ -0.85
SHPK-201ENST00000225519 TENM4Q6N022 2769 aa9.74□□□□□ -0.85
SHPK-201ENST00000225519 TRBV7-6A0A0J9YX20 115 aa9.74□□□□□ -0.85
SHPK-201ENST00000225519 A0A0U1RQV1 116 aa9.74□□□□□ -0.85
SHPK-201ENST00000225519 REG3AQ06141 175 aa9.74□□□□□ -0.85
SHPK-201ENST00000225519 KIAA0087Q14695 138 aa9.73□□□□□ -0.85
SHPK-201ENST00000225519 LINC01006Q8NI28 216 aa9.73□□□□□ -0.85
SHPK-201ENST00000225519 MUC7Q8TAX7 377 aa9.73□□□□□ -0.85
SHPK-201ENST00000225519 CXCL6P80162 114 aa9.73□□□□□ -0.85
SHPK-201ENST00000225519 Q8NDZ9 215 aa9.73□□□□□ -0.85
SHPK-201ENST00000225519 INAFM1C9JVW0 142 aa9.73□□□□□ -0.85
SHPK-201ENST00000225519 FSHBP01225 129 aa9.73□□□□□ -0.85
SHPK-201ENST00000225519 LINC00474Q9P2X8 69 aa9.73□□□□□ -0.85
SHPK-201ENST00000225519 APCP25054 2843 aa9.72□□□□□ -0.85
SHPK-201ENST00000225519 NDUFC1O43677 76 aa9.72□□□□□ -0.85
SHPK-201ENST00000225519 V9GYY9 64 aa9.72□□□□□ -0.85
SHPK-201ENST00000225519 NREPQ16612 68 aa9.72□□□□□ -0.85
SHPK-201ENST00000225519 DIRC1Q969H9 104 aa9.72□□□□□ -0.85
SHPK-201ENST00000225519 PRO0255Q9UI72 69 aa9.72□□□□□ -0.85
SHPK-201ENST00000225519 SPATA3Q8NHX4 192 aa9.72□□□□□ -0.85
SHPK-201ENST00000225519 MPLKIPQ8TAP9 179 aa9.72□□□□□ -0.85
SHPK-201ENST00000225519 HIVEP1P15822 2718 aa9.71□□□□□ -0.85
SHPK-201ENST00000225519 NBEAL2Q6ZNJ1 2754 aa9.71□□□□□ -0.85
SHPK-201ENST00000225519 CR1P17927 2039 aa9.71□□□□□ -0.86
SHPK-201ENST00000225519 C10orf25Q5T742 122 aa9.71□□□□□ -0.86
SHPK-201ENST00000225519 XAGE1AQ9HD64 81 aa9.71□□□□□ -0.86
SHPK-201ENST00000225519 FP248Q71RG6 208 aaPredicted RBP9.69□□□□□ -0.86
SHPK-201ENST00000225519 NF1P21359 2839 aa9.69□□□□□ -0.86
SHPK-201ENST00000225519 BPY2O14599 106 aa9.69□□□□□ -0.86
SHPK-201ENST00000225519 CSNK1G2-AS1Q8NCQ2 148 aa9.69□□□□□ -0.86
SHPK-201ENST00000225519 TMEM254Q8TBM7 123 aa9.69□□□□□ -0.86
SHPK-201ENST00000225519 DAD1P61803 113 aa9.68□□□□□ -0.86
SHPK-201ENST00000225519 H3BQ85 93 aa9.68□□□□□ -0.86
SHPK-201ENST00000225519 Q8N9L7 120 aa9.68□□□□□ -0.86
SHPK-201ENST00000225519 CYSRT1A8MQ03 144 aa9.68□□□□□ -0.86
SHPK-201ENST00000225519 COX7BP24311 80 aa9.68□□□□□ -0.86
SHPK-201ENST00000225519 DEFB4AO15263 64 aa9.67□□□□□ -0.86
SHPK-201ENST00000225519 ATP5EP56381 51 aaPredicted RBP9.67□□□□□ -0.86
SHPK-201ENST00000225519 IGHV4-28A0A0C4DH34 117 aa9.67□□□□□ -0.86
SHPK-201ENST00000225519 DNAJC9-AS1A6NH13 148 aa9.67□□□□□ -0.86
SHPK-201ENST00000225519 HTN3P15516 51 aa9.67□□□□□ -0.86
SHPK-201ENST00000225519 EPM2AB3EWF7 344 aa9.66□□□□□ -0.86
SHPK-201ENST00000225519 C1orf195Q5TG92 126 aa9.65□□□□□ -0.86
SHPK-201ENST00000225519 C9orf66Q5T8R8 295 aa9.65□□□□□ -0.87
SHPK-201ENST00000225519 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.65□□□□□ -0.87
SHPK-201ENST00000225519 ZNF73O43830 326 aaPredicted RBP9.64□□□□□ -0.87
SHPK-201ENST00000225519 IGLV1-51P01701 117 aa9.64□□□□□ -0.87
SHPK-201ENST00000225519 IGLV6-57P01721 117 aa9.64□□□□□ -0.87
SHPK-201ENST00000225519 SEC61GP60059 68 aa9.63□□□□□ -0.87
SHPK-201ENST00000225519 KLK12Q9UKR0 248 aa9.63□□□□□ -0.87
SHPK-201ENST00000225519 TRBV7-4A0A0J9YYF1 115 aa9.63□□□□□ -0.87
SHPK-201ENST00000225519 C19orf73Q9NVV2 129 aa9.63□□□□□ -0.87
SHPK-201ENST00000225519 FUSP35637 526 aaKnown RBP eCLIP9.63□□□□□ -0.87
SHPK-201ENST00000225519 C16orf95Q9H693 158 aa9.61□□□□□ -0.87
SHPK-201ENST00000225519 C3orf84H3BNL1 204 aa9.6□□□□□ -0.87
SHPK-201ENST00000225519 PRYO14603 147 aa9.6□□□□□ -0.87
SHPK-201ENST00000225519 NOTCH1P46531 2555 aa9.59□□□□□ -0.87
SHPK-201ENST00000225519 DEFB105AQ8NG35 78 aa9.58□□□□□ -0.88
SHPK-201ENST00000225519 F8WDY8 70 aa9.58□□□□□ -0.88
SHPK-201ENST00000225519 HIGD2BQ4VC39 106 aa9.58□□□□□ -0.88
SHPK-201ENST00000225519 A0A0J9YWU9 116 aa9.57□□□□□ -0.88
SHPK-201ENST00000225519 IGHV4-30-4P0DP06 118 aa9.57□□□□□ -0.88
SHPK-201ENST00000225519 DEFB135Q30KP9 77 aa9.56□□□□□ -0.88
SHPK-201ENST00000225519 CAMK2N2Q96S95 79 aa9.56□□□□□ -0.88
SHPK-201ENST00000225519 HIGD2AQ9BW72 106 aa9.56□□□□□ -0.88
SHPK-201ENST00000225519 FAM229BQ4G0N7 80 aa9.56□□□□□ -0.88
SHPK-201ENST00000225519 C6orf48Q9UBA6 75 aa9.55□□□□□ -0.88
SHPK-201ENST00000225519 CELA1Q9UNI1 258 aa9.55□□□□□ -0.88
SHPK-201ENST00000225519 ESRGQ1W209 222 aa9.55□□□□□ -0.88
SHPK-201ENST00000225519 ELOF1P60002 83 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms