RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 LINC01561Q8N1V8 128 aa8.07□□□□□ -1.12
NOD1-201ENST00000222823 SPTSSBQ8NFR3 76 aa8.07□□□□□ -1.12
NOD1-201ENST00000222823 CELA1Q9UNI1 258 aa8.07□□□□□ -1.12
NOD1-201ENST00000222823 A0A087WVE0 104 aa8.07□□□□□ -1.12
NOD1-201ENST00000222823 LINC00337Q8N6G1 96 aa8.07□□□□□ -1.12
NOD1-201ENST00000222823 Q8N9L7 120 aa8.06□□□□□ -1.12
NOD1-201ENST00000222823 TNRC18O15417 2968 aaPredicted RBP8.06□□□□□ -1.12
NOD1-201ENST00000222823 IGLV5-39A0A0G2JS06 123 aa8.06□□□□□ -1.12
NOD1-201ENST00000222823 ATP5EP56381 51 aaPredicted RBP8.05□□□□□ -1.12
NOD1-201ENST00000222823 Q6ZRU5 148 aa8.05□□□□□ -1.12
NOD1-201ENST00000222823 F8WDY8 70 aa8.05□□□□□ -1.12
NOD1-201ENST00000222823 A8MTW9 85 aa8.05□□□□□ -1.12
NOD1-201ENST00000222823 FHL3Q13643 280 aa8.04□□□□□ -1.12
NOD1-201ENST00000222823 CENPEQ02224 2701 aa8.04□□□□□ -1.12
NOD1-201ENST00000222823 COL6A3P12111 3177 aa8.04□□□□□ -1.12
NOD1-201ENST00000222823 FAM30AQ9NZY2 134 aa8.03□□□□□ -1.12
NOD1-201ENST00000222823 MRPL55Q7Z7F7 128 aaKnown RBP8.03□□□□□ -1.12
NOD1-201ENST00000222823 LINC00575Q6W349 94 aa8.03□□□□□ -1.12
NOD1-201ENST00000222823 TRAV7A0A075B6U4 112 aa8.03□□□□□ -1.12
NOD1-201ENST00000222823 Q9UF83 564 aa8.03□□□□□ -1.12
NOD1-201ENST00000222823 ZNF575Q86XF7 245 aa8.02□□□□□ -1.13
NOD1-201ENST00000222823 Q8N3U1 123 aa8.02□□□□□ -1.13
NOD1-201ENST00000222823 SVIPQ8NHG7 77 aa8.02□□□□□ -1.13
NOD1-201ENST00000222823 AKAP13Q12802 2813 aa8.02□□□□□ -1.13
NOD1-201ENST00000222823 V9GYY9 64 aa8.01□□□□□ -1.13
NOD1-201ENST00000222823 A0A087WSZ3 146 aa8□□□□□ -1.13
NOD1-201ENST00000222823 IGLV5-52A0A0A0MRZ9 124 aa8□□□□□ -1.13
NOD1-201ENST00000222823 LINC00208Q96KT6 92 aa8□□□□□ -1.13
NOD1-201ENST00000222823 PRYO14603 147 aa8□□□□□ -1.13
NOD1-201ENST00000222823 PRO0461Q9UI25 63 aa8□□□□□ -1.13
NOD1-201ENST00000222823 Q9BRP9 147 aa7.99□□□□□ -1.13
NOD1-201ENST00000222823 LINC00846Q9NV44 126 aa7.99□□□□□ -1.13
NOD1-201ENST00000222823 LINC01556Q5JQF7 62 aa7.99□□□□□ -1.13
NOD1-201ENST00000222823 CIRBP-AS1Q8TBR5 109 aa7.99□□□□□ -1.13
NOD1-201ENST00000222823 BAHCC1Q9P281 2608 aa7.99□□□□□ -1.13
NOD1-201ENST00000222823 FSHBP01225 129 aa7.99□□□□□ -1.13
NOD1-201ENST00000222823 BOD1L1Q8NFC6 3051 aa7.99□□□□□ -1.13
NOD1-201ENST00000222823 LINC01547P58512 204 aaPredicted RBP7.98□□□□□ -1.13
NOD1-201ENST00000222823 ESRGQ1W209 222 aa7.97□□□□□ -1.13
NOD1-201ENST00000222823 Q6ZVQ6 151 aa7.97□□□□□ -1.13
NOD1-201ENST00000222823 IGLV5-45A0A087WSX0 123 aa7.97□□□□□ -1.13
NOD1-201ENST00000222823 X6R8D5 127 aa7.97□□□□□ -1.13
NOD1-201ENST00000222823 PRLHP81277 87 aa7.96□□□□□ -1.13
NOD1-201ENST00000222823 C1orf134Q5TEV5 83 aa7.96□□□□□ -1.14
NOD1-201ENST00000222823 C22orf24Q9Y442 160 aa7.96□□□□□ -1.14
NOD1-201ENST00000222823 SMCPP49901 116 aaPredicted RBP7.96□□□□□ -1.14
NOD1-201ENST00000222823 MAP1AP78559 2803 aaPredicted RBP7.95□□□□□ -1.14
NOD1-201ENST00000222823 A0A0U1RQV1 116 aa7.95□□□□□ -1.14
NOD1-201ENST00000222823 K7ERS5 55 aa7.95□□□□□ -1.14
NOD1-201ENST00000222823 PRR15LQ9BU68 103 aa7.95□□□□□ -1.14
NOD1-201ENST00000222823 NHLRC4P0CG21 123 aaPredicted RBP7.94□□□□□ -1.14
NOD1-201ENST00000222823 SMIM26A0A096LP01 95 aa7.94□□□□□ -1.14
NOD1-201ENST00000222823 IGHV6-1A0A0B4J1U7 121 aa7.94□□□□□ -1.14
NOD1-201ENST00000222823 WDFY3Q8IZQ1 3526 aa7.94□□□□□ -1.14
NOD1-201ENST00000222823 A6NED7 52 aa7.93□□□□□ -1.14
NOD1-201ENST00000222823 DEFB116Q30KQ4 102 aa7.93□□□□□ -1.14
NOD1-201ENST00000222823 SOSTDC1Q6X4U4 206 aa7.93□□□□□ -1.14
NOD1-201ENST00000222823 C6orf48Q9UBA6 75 aa7.92□□□□□ -1.14
NOD1-201ENST00000222823 FLNAP21333 2647 aaKnown RBP7.92□□□□□ -1.14
NOD1-201ENST00000222823 A0A096LNT2 108 aa7.92□□□□□ -1.14
NOD1-201ENST00000222823 SMCR5Q8TEV8 140 aa7.92□□□□□ -1.14
NOD1-201ENST00000222823 CDIP1Q9H305 208 aa7.92□□□□□ -1.14
NOD1-201ENST00000222823 SERP1Q9Y6X1 66 aa7.92□□□□□ -1.14
NOD1-201ENST00000222823 HELZ2Q9BYK8 2649 aaKnown RBP7.91□□□□□ -1.14
NOD1-201ENST00000222823 SBSPONQ8IVN8 264 aa7.91□□□□□ -1.14
NOD1-201ENST00000222823 H3BNG1 76 aa7.91□□□□□ -1.14
NOD1-201ENST00000222823 KRTAP24-1Q3LI83 254 aa7.9□□□□□ -1.14
NOD1-201ENST00000222823 LINC00167Q96N53 147 aa7.9□□□□□ -1.15
NOD1-201ENST00000222823 KIAA0087Q14695 138 aa7.89□□□□□ -1.15
NOD1-201ENST00000222823 ITPR3Q14573 2671 aa7.89□□□□□ -1.15
NOD1-201ENST00000222823 TMEM254Q8TBM7 123 aa7.89□□□□□ -1.15
NOD1-201ENST00000222823 MDFIQ99750 246 aa7.88□□□□□ -1.15
NOD1-201ENST00000222823 CFAP46Q8IYW2 2715 aa7.88□□□□□ -1.15
NOD1-201ENST00000222823 SPATA3Q8NHX4 192 aa7.88□□□□□ -1.15
NOD1-201ENST00000222823 TRBV7-7A0A0K0K1E9 115 aa7.88□□□□□ -1.15
NOD1-201ENST00000222823 Q8NAQ8 132 aa7.88□□□□□ -1.15
NOD1-201ENST00000222823 FAM218AQ96MZ4 157 aa7.88□□□□□ -1.15
NOD1-201ENST00000222823 LITAFQ99732 161 aa7.87□□□□□ -1.15
NOD1-201ENST00000222823 SETXQ7Z333 2677 aaKnown RBP7.87□□□□□ -1.15
NOD1-201ENST00000222823 PCOTHQ58A44 107 aa7.87□□□□□ -1.15
NOD1-201ENST00000222823 CXCL6P80162 114 aa7.86□□□□□ -1.15
NOD1-201ENST00000222823 TRBV7-6A0A0J9YX20 115 aa7.86□□□□□ -1.15
NOD1-201ENST00000222823 HCG22E2RYF7 251 aa7.86□□□□□ -1.15
NOD1-201ENST00000222823 H0Y9P7 68 aa7.85□□□□□ -1.15
NOD1-201ENST00000222823 LOC400499M0QZD8 3231 aa7.84□□□□□ -1.16
NOD1-201ENST00000222823 CFAP47Q6ZTR5 3102 aa7.83□□□□□ -1.16
NOD1-201ENST00000222823 ADGRG4Q8IZF6 3080 aa7.82□□□□□ -1.16
NOD1-201ENST00000222823 ELOF1P60002 83 aaKnown RBP7.82□□□□□ -1.16
NOD1-201ENST00000222823 RETNLBQ9BQ08 111 aa7.82□□□□□ -1.16
NOD1-201ENST00000222823 LINC00588Q9Y4M8 146 aa7.8□□□□□ -1.16
NOD1-201ENST00000222823 Q6ZRX8 168 aa7.79□□□□□ -1.16
NOD1-201ENST00000222823 STAB1Q9NY15 2570 aa7.79□□□□□ -1.16
NOD1-201ENST00000222823 hDV103S1A0JD37 113 aa7.78□□□□□ -1.16
NOD1-201ENST00000222823 LIMD2Q9BT23 127 aa7.78□□□□□ -1.16
NOD1-201ENST00000222823 KALRNO60229 2985 aa7.78□□□□□ -1.16
NOD1-201ENST00000222823 DMXL2Q8TDJ6 3036 aa7.78□□□□□ -1.16
NOD1-201ENST00000222823 CSNK1G2-AS1Q8NCQ2 148 aa7.78□□□□□ -1.16
NOD1-201ENST00000222823 A0A1B0GW54 56 aa7.77□□□□□ -1.17
NOD1-201ENST00000222823 MOBPQ13875 183 aa7.77□□□□□ -1.17
NOD1-201ENST00000222823 SMIM29Q86T20 159 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms