RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 TAL2Q16559 108 aa9.32□□□□□ -0.92
UPK3A-201ENST00000216211 BVES-AS1Q5T3Y7 98 aa9.32□□□□□ -0.92
UPK3A-201ENST00000216211 LRP2P98164 4655 aa9.31□□□□□ -0.92
UPK3A-201ENST00000216211 COX7A2LO14548 114 aa9.31□□□□□ -0.92
UPK3A-201ENST00000216211 BATFQ16520 125 aa9.31□□□□□ -0.92
UPK3A-201ENST00000216211 IGLV5-39A0A0G2JS06 123 aa9.3□□□□□ -0.92
UPK3A-201ENST00000216211 SPINK8P0C7L1 97 aa9.3□□□□□ -0.92
UPK3A-201ENST00000216211 COL5A1-AS1Q5SY13 56 aa9.3□□□□□ -0.92
UPK3A-201ENST00000216211 SPINK6Q6UWN8 80 aa9.3□□□□□ -0.92
UPK3A-201ENST00000216211 Q6ZRP5 223 aa9.3□□□□□ -0.92
UPK3A-201ENST00000216211 C5orf38Q86SI9 138 aa9.3□□□□□ -0.92
UPK3A-201ENST00000216211 CAMK2N2Q96S95 79 aa9.3□□□□□ -0.92
UPK3A-201ENST00000216211 A0A1W2PNN7 141 aa9.28□□□□□ -0.92
UPK3A-201ENST00000216211 SRSF9Q13242 221 aaKnown RBP eCLIP9.28□□□□□ -0.92
UPK3A-201ENST00000216211 REG3GQ6UW15 175 aa9.28□□□□□ -0.92
UPK3A-201ENST00000216211 ORAOV1Q8WV07 137 aa9.28□□□□□ -0.92
UPK3A-201ENST00000216211 IGHV3OR16-9A0A0B4J2B5 98 aa9.27□□□□□ -0.93
UPK3A-201ENST00000216211 SMIM1B2RUZ4 78 aa9.27□□□□□ -0.93
UPK3A-201ENST00000216211 SCGB1D4Q6XE38 83 aa9.27□□□□□ -0.93
UPK3A-201ENST00000216211 RNF213Q63HN8 5207 aa9.26□□□□□ -0.93
UPK3A-201ENST00000216211 APOMO95445 188 aa9.26□□□□□ -0.93
UPK3A-201ENST00000216211 KRTAP10-8P60410 259 aa9.26□□□□□ -0.93
UPK3A-201ENST00000216211 RPL18AQ02543 176 aaKnown RBP9.26□□□□□ -0.93
UPK3A-201ENST00000216211 SPAG11BQ08648 103 aa9.26□□□□□ -0.93
UPK3A-201ENST00000216211 CEND1Q8N111 149 aa9.26□□□□□ -0.93
UPK3A-201ENST00000216211 LINC01561Q8N1V8 128 aa9.26□□□□□ -0.93
UPK3A-201ENST00000216211 C2orf48Q96LS8 159 aa9.26□□□□□ -0.93
UPK3A-201ENST00000216211 SPANXB1Q9NS25 103 aaPredicted RBP9.26□□□□□ -0.93
UPK3A-201ENST00000216211 NDUFA12Q9UI09 145 aa9.25□□□□□ -0.93
UPK3A-201ENST00000216211 A0A087WZ39 114 aa9.24□□□□□ -0.93
UPK3A-201ENST00000216211 A0A0J9YXY3 114 aa9.24□□□□□ -0.93
UPK3A-201ENST00000216211 NDUFA1O15239 70 aa9.24□□□□□ -0.93
UPK3A-201ENST00000216211 C9orf116Q5BN46 136 aaPredicted RBP9.24□□□□□ -0.93
UPK3A-201ENST00000216211 HIST1H4GQ99525 98 aa9.24□□□□□ -0.93
UPK3A-201ENST00000216211 A6NDN8 102 aa9.23□□□□□ -0.93
UPK3A-201ENST00000216211 PHF5AQ7RTV0 110 aaKnown RBP9.23□□□□□ -0.93
UPK3A-201ENST00000216211 PSORS1C2Q9UIG4 136 aa9.23□□□□□ -0.93
UPK3A-201ENST00000216211 A0A1B0GV90 55 aa9.21□□□□□ -0.94
UPK3A-201ENST00000216211 TIMM17BO60830 172 aa9.21□□□□□ -0.94
UPK3A-201ENST00000216211 FXYD2P54710 66 aa9.21□□□□□ -0.94
UPK3A-201ENST00000216211 RNF151Q2KHN1 245 aa9.21□□□□□ -0.94
UPK3A-201ENST00000216211 TMEM238C9JI98 176 aa9.2□□□□□ -0.94
UPK3A-201ENST00000216211 ZNF625Q96I27 306 aaPredicted RBP9.2□□□□□ -0.94
UPK3A-201ENST00000216211 TAX1BP3O14907 124 aa9.19□□□□□ -0.94
UPK3A-201ENST00000216211 HERV-K104P63124 156 aa9.19□□□□□ -0.94
UPK3A-201ENST00000216211 C1orf137Q5JT78 98 aa9.19□□□□□ -0.94
UPK3A-201ENST00000216211 C10orf25Q5T742 122 aa9.19□□□□□ -0.94
UPK3A-201ENST00000216211 COX7B2Q8TF08 81 aa9.19□□□□□ -0.94
UPK3A-201ENST00000216211 LITAFQ99732 161 aa9.19□□□□□ -0.94
UPK3A-201ENST00000216211 UNQ6190/PRO20217Q6UXQ8 127 aa9.18□□□□□ -0.94
UPK3A-201ENST00000216211 Q6ZVH6 145 aa9.18□□□□□ -0.94
UPK3A-201ENST00000216211 SPANXDQ9BXN6 97 aa9.18□□□□□ -0.94
UPK3A-201ENST00000216211 SPANXCQ9NY87 97 aa9.18□□□□□ -0.94
UPK3A-201ENST00000216211 A0A1B0GWB2 263 aa9.17□□□□□ -0.94
UPK3A-201ENST00000216211 FAM168BA1KXE4 195 aa9.17□□□□□ -0.94
UPK3A-201ENST00000216211 F8WDY8 70 aa9.17□□□□□ -0.94
UPK3A-201ENST00000216211 SMIM13P0DJ93 91 aa9.17□□□□□ -0.94
UPK3A-201ENST00000216211 SFTA2Q6UW10 78 aa9.17□□□□□ -0.94
UPK3A-201ENST00000216211 C6orf48Q9UBA6 75 aa9.17□□□□□ -0.94
UPK3A-201ENST00000216211 TMEM238LA0A1B0GVL6 79 aa9.16□□□□□ -0.94
UPK3A-201ENST00000216211 A6NJY4 79 aa9.16□□□□□ -0.94
UPK3A-201ENST00000216211 TLX1NBP0CAT3 122 aa9.15□□□□□ -0.94
UPK3A-201ENST00000216211 FAM19A5Q7Z5A7 132 aaPredicted RBP9.15□□□□□ -0.94
UPK3A-201ENST00000216211 Q8IZM0 81 aa9.15□□□□□ -0.94
UPK3A-201ENST00000216211 NHP2Q9NX24 153 aaKnown RBP9.15□□□□□ -0.94
UPK3A-201ENST00000216211 KIAA0087Q14695 138 aa9.14□□□□□ -0.95
UPK3A-201ENST00000216211 GAGE2EQ4V326 116 aa9.14□□□□□ -0.95
UPK3A-201ENST00000216211 ADAMTSL4-AS1Q5T5F5 129 aa9.14□□□□□ -0.95
UPK3A-201ENST00000216211 KRTAP11-1Q8IUC1 163 aa9.14□□□□□ -0.95
UPK3A-201ENST00000216211 MUSTN1Q8IVN3 82 aa9.14□□□□□ -0.95
UPK3A-201ENST00000216211 TOMM7Q9P0U1 55 aa9.14□□□□□ -0.95
UPK3A-201ENST00000216211 GAGE2DQ9UEU5 116 aa9.14□□□□□ -0.95
UPK3A-201ENST00000216211 C9orf118A6NHY6 69 aa9.13□□□□□ -0.95
UPK3A-201ENST00000216211 IGLV7-43P04211 117 aa9.13□□□□□ -0.95
UPK3A-201ENST00000216211 IFITM1P13164 125 aa9.13□□□□□ -0.95
UPK3A-201ENST00000216211 RPL24P83731 157 aaKnown RBP9.13□□□□□ -0.95
UPK3A-201ENST00000216211 PRSS2P07478 247 aa9.12□□□□□ -0.95
UPK3A-201ENST00000216211 C6orf226Q5I0X4 101 aa9.12□□□□□ -0.95
UPK3A-201ENST00000216211 PPDPFQ9H3Y8 114 aa9.12□□□□□ -0.95
UPK3A-201ENST00000216211 LPAP08519 4548 aa9.12□□□□□ -0.95
UPK3A-201ENST00000216211 MEIG1Q5JSS6 88 aa9.11□□□□□ -0.95
UPK3A-201ENST00000216211 DIRC1Q969H9 104 aa9.11□□□□□ -0.95
UPK3A-201ENST00000216211 CXCL5P42830 114 aa9.1□□□□□ -0.95
UPK3A-201ENST00000216211 C2orf82Q6UX34 121 aa9.1□□□□□ -0.95
UPK3A-201ENST00000216211 KRTAP7-1Q8IUC3 87 aa9.1□□□□□ -0.95
UPK3A-201ENST00000216211 COPS9Q8WXC6 57 aa9.1□□□□□ -0.95
UPK3A-201ENST00000216211 RAB37Q96AX2 223 aa9.1□□□□□ -0.95
UPK3A-201ENST00000216211 TRBV30A0A0K0K1B3 111 aa9.09□□□□□ -0.95
UPK3A-201ENST00000216211 A4D1N5 150 aa9.09□□□□□ -0.95
UPK3A-201ENST00000216211 H0Y9J4 135 aa9.09□□□□□ -0.95
UPK3A-201ENST00000216211 K7ERJ3 54 aa9.09□□□□□ -0.95
UPK3A-201ENST00000216211 M0QXV9 152 aa9.09□□□□□ -0.95
UPK3A-201ENST00000216211 PRR26Q8N8Z3 221 aa9.09□□□□□ -0.95
UPK3A-201ENST00000216211 CFC1BP0CG36 223 aa9.08□□□□□ -0.96
UPK3A-201ENST00000216211 CFC1P0CG37 223 aa9.08□□□□□ -0.96
UPK3A-201ENST00000216211 UBE2BP63146 152 aa9.08□□□□□ -0.96
UPK3A-201ENST00000216211 A0A0B4J2C4 111 aa9.07□□□□□ -0.96
UPK3A-201ENST00000216211 CKS1BP61024 79 aa9.07□□□□□ -0.96
UPK3A-201ENST00000216211 C9orf129Q5T035 196 aaKnown RBP9.07□□□□□ -0.96
UPK3A-201ENST00000216211 LINC00308Q8TCZ7 52 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms