RNA–Protein interactions for RNA: ENST00000209728.8

CDC6-201, Transcript of cell division cycle 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC6, Length 4,810 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6-201ENST00000209728 LAMA1P25391 3075 aa8.77□□□□□ -1.01
CDC6-201ENST00000209728 SPINK6Q6UWN8 80 aa8.77□□□□□ -1.01
CDC6-201ENST00000209728 SMIM26A0A096LP01 95 aa8.76□□□□□ -1.01
CDC6-201ENST00000209728 C4orf48Q5BLP8 95 aa8.76□□□□□ -1.01
CDC6-201ENST00000209728 C10orf25Q5T742 122 aa8.76□□□□□ -1.01
CDC6-201ENST00000209728 IGLV9-49A0A0B4J1Y8 123 aa8.75□□□□□ -1.01
CDC6-201ENST00000209728 SZT2Q5T011 3432 aa8.74□□□□□ -1.01
CDC6-201ENST00000209728 SERP1Q9Y6X1 66 aa8.74□□□□□ -1.01
CDC6-201ENST00000209728 FREM2Q5SZK8 3169 aa8.74□□□□□ -1.01
CDC6-201ENST00000209728 PLAC8L1A1L4L8 177 aa8.73□□□□□ -1.01
CDC6-201ENST00000209728 DSPP15924 2871 aaKnown RBP8.73□□□□□ -1.01
CDC6-201ENST00000209728 DEFB116Q30KQ4 102 aa8.73□□□□□ -1.01
CDC6-201ENST00000209728 C2orf48Q96LS8 159 aa8.72□□□□□ -1.01
CDC6-201ENST00000209728 X6R8D5 127 aa8.72□□□□□ -1.01
CDC6-201ENST00000209728 REG3GQ6UW15 175 aa8.72□□□□□ -1.01
CDC6-201ENST00000209728 LINC00208Q96KT6 92 aa8.71□□□□□ -1.01
CDC6-201ENST00000209728 SPATA3Q8NHX4 192 aa8.71□□□□□ -1.01
CDC6-201ENST00000209728 TMEM254Q8TBM7 123 aa8.71□□□□□ -1.01
CDC6-201ENST00000209728 PRYO14603 147 aa8.71□□□□□ -1.02
CDC6-201ENST00000209728 C6orf48Q9UBA6 75 aa8.71□□□□□ -1.02
CDC6-201ENST00000209728 FRYQ5TBA9 3013 aa8.7□□□□□ -1.02
CDC6-201ENST00000209728 FLNAP21333 2647 aaKnown RBP8.7□□□□□ -1.02
CDC6-201ENST00000209728 A0A087WSZ3 146 aa8.7□□□□□ -1.02
CDC6-201ENST00000209728 NBEAQ8NFP9 2946 aa8.7□□□□□ -1.02
CDC6-201ENST00000209728 MRPL55Q7Z7F7 128 aaKnown RBP8.69□□□□□ -1.02
CDC6-201ENST00000209728 MGAM2Q2M2H8 2515 aa8.69□□□□□ -1.02
CDC6-201ENST00000209728 FSHBP01225 129 aa8.69□□□□□ -1.02
CDC6-201ENST00000209728 CRYGAP11844 174 aa8.69□□□□□ -1.02
CDC6-201ENST00000209728 SVIPQ8NHG7 77 aa8.69□□□□□ -1.02
CDC6-201ENST00000209728 ZNF575Q86XF7 245 aa8.69□□□□□ -1.02
CDC6-201ENST00000209728 IL17DQ8TAD2 202 aa8.69□□□□□ -1.02
CDC6-201ENST00000209728 SMCR5Q8TEV8 140 aa8.68□□□□□ -1.02
CDC6-201ENST00000209728 ZNF292O60281 2723 aa8.68□□□□□ -1.02
CDC6-201ENST00000209728 CXCL6P80162 114 aa8.66□□□□□ -1.02
CDC6-201ENST00000209728 PRLHP81277 87 aa8.66□□□□□ -1.02
CDC6-201ENST00000209728 ESRGQ1W209 222 aa8.66□□□□□ -1.02
CDC6-201ENST00000209728 KIAA0087Q14695 138 aa8.66□□□□□ -1.02
CDC6-201ENST00000209728 C7orf33Q8WU49 177 aa8.66□□□□□ -1.02
CDC6-201ENST00000209728 AKAP13Q12802 2813 aa8.65□□□□□ -1.02
CDC6-201ENST00000209728 Q9BRP9 147 aa8.65□□□□□ -1.02
CDC6-201ENST00000209728 V9GYY9 64 aa8.65□□□□□ -1.02
CDC6-201ENST00000209728 C22orf24Q9Y442 160 aa8.64□□□□□ -1.03
CDC6-201ENST00000209728 ITPR3Q14573 2671 aa8.64□□□□□ -1.03
CDC6-201ENST00000209728 A6NED7 52 aa8.64□□□□□ -1.03
CDC6-201ENST00000209728 Q6ZQT0 140 aa8.64□□□□□ -1.03
CDC6-201ENST00000209728 CASC2Q6XLA1 102 aa8.63□□□□□ -1.03
CDC6-201ENST00000209728 ATRQ13535 2644 aa8.63□□□□□ -1.03
CDC6-201ENST00000209728 NHLRC4P0CG21 123 aaPredicted RBP8.61□□□□□ -1.03
CDC6-201ENST00000209728 LINC00474Q9P2X8 69 aa8.61□□□□□ -1.03
CDC6-201ENST00000209728 TRBV7-6A0A0J9YX20 115 aa8.61□□□□□ -1.03
CDC6-201ENST00000209728 ZNF706Q9Y5V0 76 aaPredicted RBP8.61□□□□□ -1.03
CDC6-201ENST00000209728 F8WDY8 70 aa8.61□□□□□ -1.03
CDC6-201ENST00000209728 PSPHP1O15172 72 aa8.6□□□□□ -1.03
CDC6-201ENST00000209728 ELOF1P60002 83 aaKnown RBP8.6□□□□□ -1.03
CDC6-201ENST00000209728 LINC01556Q5JQF7 62 aa8.6□□□□□ -1.03
CDC6-201ENST00000209728 SMIM29Q86T20 159 aa8.6□□□□□ -1.03
CDC6-201ENST00000209728 LINC00167Q96N53 147 aa8.6□□□□□ -1.03
CDC6-201ENST00000209728 CFAP46Q8IYW2 2715 aa8.6□□□□□ -1.03
CDC6-201ENST00000209728 Q8NAQ8 132 aa8.59□□□□□ -1.03
CDC6-201ENST00000209728 CSNK1G2-AS1Q8NCQ2 148 aa8.59□□□□□ -1.03
CDC6-201ENST00000209728 C1orf195Q5TG92 126 aa8.59□□□□□ -1.04
CDC6-201ENST00000209728 HCG22E2RYF7 251 aa8.58□□□□□ -1.04
CDC6-201ENST00000209728 PCOTHQ58A44 107 aa8.58□□□□□ -1.04
CDC6-201ENST00000209728 CHD6Q8TD26 2715 aa8.58□□□□□ -1.04
CDC6-201ENST00000209728 IGHV6-1A0A0B4J1U7 121 aa8.58□□□□□ -1.04
CDC6-201ENST00000209728 SEC61GP60059 68 aa8.58□□□□□ -1.04
CDC6-201ENST00000209728 GIG44P09565 113 aaPredicted RBP8.57□□□□□ -1.04
CDC6-201ENST00000209728 LOC110117498A0A087WWA1 95 aa8.57□□□□□ -1.04
CDC6-201ENST00000209728 A0A096LNT2 108 aa8.57□□□□□ -1.04
CDC6-201ENST00000209728 LY6G6CO95867 125 aa8.57□□□□□ -1.04
CDC6-201ENST00000209728 TM2D3Q9BRN9 247 aa8.56□□□□□ -1.04
CDC6-201ENST00000209728 H0Y9P7 68 aa8.56□□□□□ -1.04
CDC6-201ENST00000209728 C4orf26Q17RF5 130 aa8.56□□□□□ -1.04
CDC6-201ENST00000209728 SPEGQ15772 3267 aa8.55□□□□□ -1.04
CDC6-201ENST00000209728 PRR15LQ9BU68 103 aa8.55□□□□□ -1.04
CDC6-201ENST00000209728 MAST4O15021 2626 aa8.55□□□□□ -1.04
CDC6-201ENST00000209728 FRYLO94915 3013 aa8.54□□□□□ -1.04
CDC6-201ENST00000209728 CIRBP-AS1Q8TBR5 109 aa8.54□□□□□ -1.04
CDC6-201ENST00000209728 ST20-AS1Q8NBB2 130 aa8.53□□□□□ -1.04
CDC6-201ENST00000209728 IGLV6-57P01721 117 aa8.53□□□□□ -1.04
CDC6-201ENST00000209728 RPS28P62857 69 aaKnown RBP8.53□□□□□ -1.04
CDC6-201ENST00000209728 Q6ZRP5 223 aa8.53□□□□□ -1.04
CDC6-201ENST00000209728 C9orf129Q5T035 196 aaKnown RBP8.52□□□□□ -1.05
CDC6-201ENST00000209728 C19orf73Q9NVV2 129 aa8.52□□□□□ -1.05
CDC6-201ENST00000209728 VPREB1P12018 145 aa8.51□□□□□ -1.05
CDC6-201ENST00000209728 Q6ZRX8 168 aa8.51□□□□□ -1.05
CDC6-201ENST00000209728 BCE1O60756 84 aa8.51□□□□□ -1.05
CDC6-201ENST00000209728 BOD1L1Q8NFC6 3051 aa8.5□□□□□ -1.05
CDC6-201ENST00000209728 H3BNG1 76 aa8.5□□□□□ -1.05
CDC6-201ENST00000209728 PMAIP1Q13794 54 aa8.5□□□□□ -1.05
CDC6-201ENST00000209728 Q8NBF4 154 aa8.5□□□□□ -1.05
CDC6-201ENST00000209728 NUPR2A6NF83 97 aa8.5□□□□□ -1.05
CDC6-201ENST00000209728 GVQW2A0A096LPI5 108 aaPredicted RBP8.49□□□□□ -1.05
CDC6-201ENST00000209728 LINC00476Q8WZB0 136 aa8.48□□□□□ -1.05
CDC6-201ENST00000209728 C1orf64Q8NEQ6 169 aa8.48□□□□□ -1.05
CDC6-201ENST00000209728 RETNLBQ9BQ08 111 aa8.48□□□□□ -1.05
CDC6-201ENST00000209728 HELZ2Q9BYK8 2649 aaKnown RBP8.47□□□□□ -1.05
CDC6-201ENST00000209728 KALRNO60229 2985 aa8.47□□□□□ -1.05
CDC6-201ENST00000209728 IGLV5-52A0A0A0MRZ9 124 aa8.46□□□□□ -1.05
CDC6-201ENST00000209728 FAM168BA1KXE4 195 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms