RNA–Protein interactions for RNA: ENST00000193403.10

ACTN1-201, Transcript of actinin alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ACTN1, Length 3,779 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-201ENST00000193403 C22orf24Q9Y442 160 aa7.8□□□□□ -1.16
ACTN1-201ENST00000193403 KMT2BQ9UMN6 2715 aaPredicted RBP7.8□□□□□ -1.16
ACTN1-201ENST00000193403 IGKV2D-24A0A075B6R9 120 aa7.8□□□□□ -1.16
ACTN1-201ENST00000193403 FAM236DA0A1B0GTK5 79 aa7.79□□□□□ -1.16
ACTN1-201ENST00000193403 FAM236CP0DP71 79 aa7.79□□□□□ -1.16
ACTN1-201ENST00000193403 REG3AQ06141 175 aa7.79□□□□□ -1.16
ACTN1-201ENST00000193403 C6orf223Q8N319 242 aa7.79□□□□□ -1.16
ACTN1-201ENST00000193403 C2orf48Q96LS8 159 aa7.79□□□□□ -1.16
ACTN1-201ENST00000193403 PRO0255Q9UI72 69 aa7.79□□□□□ -1.16
ACTN1-201ENST00000193403 UNQ6190/PRO20217Q6UXQ8 127 aa7.78□□□□□ -1.16
ACTN1-201ENST00000193403 ZNF469Q96JG9 3925 aaPredicted RBP7.78□□□□□ -1.16
ACTN1-201ENST00000193403 LY6G6DO95868 133 aa7.77□□□□□ -1.17
ACTN1-201ENST00000193403 CAMK2N2Q96S95 79 aa7.77□□□□□ -1.17
ACTN1-201ENST00000193403 Q8IZM0 81 aa7.75□□□□□ -1.17
ACTN1-201ENST00000193403 C1orf43Q9BWL3 253 aa7.75□□□□□ -1.17
ACTN1-201ENST00000193403 RMI2Q96E14 147 aa7.75□□□□□ -1.17
ACTN1-201ENST00000193403 F8WEM9 126 aa7.73□□□□□ -1.17
ACTN1-201ENST00000193403 ATP5EP2Q5VTU8 51 aa7.73□□□□□ -1.17
ACTN1-201ENST00000193403 CD164L2Q6UWJ8 174 aa7.73□□□□□ -1.17
ACTN1-201ENST00000193403 C10orf25Q5T742 122 aa7.72□□□□□ -1.17
ACTN1-201ENST00000193403 DIRC1Q969H9 104 aa7.72□□□□□ -1.17
ACTN1-201ENST00000193403 GIG44P09565 113 aaPredicted RBP7.72□□□□□ -1.17
ACTN1-201ENST00000193403 Q8N9L7 120 aa7.72□□□□□ -1.17
ACTN1-201ENST00000193403 NSD1Q96L73 2696 aaPredicted RBP7.72□□□□□ -1.17
ACTN1-201ENST00000193403 NDUFC2O95298 119 aa7.72□□□□□ -1.17
ACTN1-201ENST00000193403 CYSRT1A8MQ03 144 aa7.71□□□□□ -1.17
ACTN1-201ENST00000193403 APOC4P55056 127 aa7.71□□□□□ -1.17
ACTN1-201ENST00000193403 MPLKIPQ8TAP9 179 aa7.71□□□□□ -1.17
ACTN1-201ENST00000193403 M0R2N4 97 aa7.71□□□□□ -1.18
ACTN1-201ENST00000193403 SPART-AS1P0CW21 52 aa7.71□□□□□ -1.18
ACTN1-201ENST00000193403 NKAPP1Q8N9T2 125 aa7.71□□□□□ -1.18
ACTN1-201ENST00000193403 TRBV10-3A0A0K0K1G6 114 aa7.71□□□□□ -1.18
ACTN1-201ENST00000193403 C3orf84H3BNL1 204 aa7.71□□□□□ -1.18
ACTN1-201ENST00000193403 FAM19A3Q7Z5A8 133 aa7.71□□□□□ -1.18
ACTN1-201ENST00000193403 PKIGQ9Y2B9 76 aa7.71□□□□□ -1.18
ACTN1-201ENST00000193403 PLAC8L1A1L4L8 177 aa7.7□□□□□ -1.18
ACTN1-201ENST00000193403 Q6ZVQ6 151 aa7.7□□□□□ -1.18
ACTN1-201ENST00000193403 PDZD2O15018 2839 aa7.7□□□□□ -1.18
ACTN1-201ENST00000193403 TRAV10A0A0B4J240 114 aa7.7□□□□□ -1.18
ACTN1-201ENST00000193403 LINC01547P58512 204 aaPredicted RBP7.7□□□□□ -1.18
ACTN1-201ENST00000193403 IL17DQ8TAD2 202 aa7.69□□□□□ -1.18
ACTN1-201ENST00000193403 LINC00575Q6W349 94 aa7.69□□□□□ -1.18
ACTN1-201ENST00000193403 RETNQ9HD89 108 aa7.69□□□□□ -1.18
ACTN1-201ENST00000193403 COX7BP24311 80 aa7.68□□□□□ -1.18
ACTN1-201ENST00000193403 CR1P17927 2039 aa7.68□□□□□ -1.18
ACTN1-201ENST00000193403 A0A0U1RQV1 116 aa7.68□□□□□ -1.18
ACTN1-201ENST00000193403 IGLV1-51P01701 117 aa7.68□□□□□ -1.18
ACTN1-201ENST00000193403 OXLD1Q5BKU9 147 aa7.68□□□□□ -1.18
ACTN1-201ENST00000193403 BRK1Q8WUW1 75 aa7.68□□□□□ -1.18
ACTN1-201ENST00000193403 A0A096LNT2 108 aa7.67□□□□□ -1.18
ACTN1-201ENST00000193403 RPS28P62857 69 aaKnown RBP7.67□□□□□ -1.18
ACTN1-201ENST00000193403 NREPQ16612 68 aa7.67□□□□□ -1.18
ACTN1-201ENST00000193403 TRAV7A0A075B6U4 112 aa7.66□□□□□ -1.18
ACTN1-201ENST00000193403 OXTP01178 125 aa7.66□□□□□ -1.18
ACTN1-201ENST00000193403 NANOS2P60321 138 aaKnown RBP7.66□□□□□ -1.18
ACTN1-201ENST00000193403 C9orf66Q5T8R8 295 aa7.66□□□□□ -1.18
ACTN1-201ENST00000193403 A0A096LNI7 61 aa7.65□□□□□ -1.18
ACTN1-201ENST00000193403 FSHBP01225 129 aa7.65□□□□□ -1.18
ACTN1-201ENST00000193403 KRTAP1-3Q8IUG1 177 aa7.65□□□□□ -1.18
ACTN1-201ENST00000193403 SPATA3Q8NHX4 192 aa7.65□□□□□ -1.18
ACTN1-201ENST00000193403 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.65□□□□□ -1.19
ACTN1-201ENST00000193403 Q6ZQT0 140 aa7.65□□□□□ -1.19
ACTN1-201ENST00000193403 ZNF73O43830 326 aaPredicted RBP7.64□□□□□ -1.19
ACTN1-201ENST00000193403 CELA1Q9UNI1 258 aa7.64□□□□□ -1.19
ACTN1-201ENST00000193403 UBE2BP63146 152 aa7.64□□□□□ -1.19
ACTN1-201ENST00000193403 MUC7Q8TAX7 377 aa7.64□□□□□ -1.19
ACTN1-201ENST00000193403 TM2D3Q9BRN9 247 aa7.64□□□□□ -1.19
ACTN1-201ENST00000193403 TENM1Q9UKZ4 2725 aa7.64□□□□□ -1.19
ACTN1-201ENST00000193403 A0A1B0GUV1 79 aa7.64□□□□□ -1.19
ACTN1-201ENST00000193403 PSCAO43653 123 aa7.64□□□□□ -1.19
ACTN1-201ENST00000193403 FBN1P35555 2871 aaKnown RBP7.64□□□□□ -1.19
ACTN1-201ENST00000193403 IGKV2-24A0A0C4DH68 120 aa7.63□□□□□ -1.19
ACTN1-201ENST00000193403 LRCOL1A6NCL2 159 aa7.63□□□□□ -1.19
ACTN1-201ENST00000193403 COX17Q14061 63 aa7.63□□□□□ -1.19
ACTN1-201ENST00000193403 OBSCN-AS1Q96MR7 158 aa7.63□□□□□ -1.19
ACTN1-201ENST00000193403 Q8NDZ9 215 aa7.63□□□□□ -1.19
ACTN1-201ENST00000193403 RPL37AP8A6NKH3 93 aa7.63□□□□□ -1.19
ACTN1-201ENST00000193403 CSNK1G2-AS1Q8NCQ2 148 aa7.62□□□□□ -1.19
ACTN1-201ENST00000193403 KIAA0087Q14695 138 aa7.62□□□□□ -1.19
ACTN1-201ENST00000193403 PRR4Q16378 134 aa7.61□□□□□ -1.19
ACTN1-201ENST00000193403 SERP1Q9Y6X1 66 aa7.61□□□□□ -1.19
ACTN1-201ENST00000193403 BPY2O14599 106 aa7.61□□□□□ -1.19
ACTN1-201ENST00000193403 MIFP14174 115 aa7.61□□□□□ -1.19
ACTN1-201ENST00000193403 PDE6GP18545 87 aa7.6□□□□□ -1.19
ACTN1-201ENST00000193403 VWFP04275 2813 aa7.6□□□□□ -1.19
ACTN1-201ENST00000193403 C19orf73Q9NVV2 129 aa7.6□□□□□ -1.19
ACTN1-201ENST00000193403 UBE2DNLQ8IWF7 75 aa7.59□□□□□ -1.19
ACTN1-201ENST00000193403 LINC00474Q9P2X8 69 aa7.59□□□□□ -1.19
ACTN1-201ENST00000193403 ETDCA0A1B0GVM5 59 aa7.59□□□□□ -1.2
ACTN1-201ENST00000193403 X6R8D5 127 aa7.59□□□□□ -1.2
ACTN1-201ENST00000193403 LYRM9A8MSI8 78 aa7.58□□□□□ -1.2
ACTN1-201ENST00000193403 NDUFC2-KCTD14E9PQ53 114 aa7.58□□□□□ -1.2
ACTN1-201ENST00000193403 H7BZZ5 65 aa7.58□□□□□ -1.2
ACTN1-201ENST00000193403 IGHV4-30-4P0DP06 118 aa7.58□□□□□ -1.2
ACTN1-201ENST00000193403 KPRPQ5T749 579 aaPredicted RBP7.58□□□□□ -1.2
ACTN1-201ENST00000193403 FAM30AQ9NZY2 134 aa7.58□□□□□ -1.2
ACTN1-201ENST00000193403 WFDC10BQ8IUB3 73 aa7.58□□□□□ -1.2
ACTN1-201ENST00000193403 C6orf48Q9UBA6 75 aa7.57□□□□□ -1.2
ACTN1-201ENST00000193403 TMEM254Q8TBM7 123 aa7.57□□□□□ -1.2
ACTN1-201ENST00000193403 TRBV7-6A0A0J9YX20 115 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms