RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 HIVEP2P31629 2446 aa2.43□□□□□ -2.02
NEB-201ENST00000172853 IGLV8-61A0A075B6I0 122 aa2.42□□□□□ -2.02
NEB-201ENST00000172853 C8orf17Q9NRJ1 99 aa2.42□□□□□ -2.02
NEB-201ENST00000172853 LINC00310P59036 64 aa2.42□□□□□ -2.02
NEB-201ENST00000172853 C11orf1Q9H5F2 150 aa2.42□□□□□ -2.02
NEB-201ENST00000172853 DOPEY1Q5JWR5 2465 aa2.42□□□□□ -2.02
NEB-201ENST00000172853 KLLNB2CW77 178 aa2.42□□□□□ -2.02
NEB-201ENST00000172853 MALRD1Q5VYJ5 2156 aa2.42□□□□□ -2.02
NEB-201ENST00000172853 PSPHP1O15172 72 aa2.42□□□□□ -2.02
NEB-201ENST00000172853 PLXNB1O43157 2135 aa2.42□□□□□ -2.02
NEB-201ENST00000172853 Q8N3U1 123 aa2.42□□□□□ -2.02
NEB-201ENST00000172853 C2orf91Q6ZV80 131 aa2.42□□□□□ -2.02
NEB-201ENST00000172853 MYO9AB2RTY4 2548 aa2.42□□□□□ -2.02
NEB-201ENST00000172853 UQCR11O14957 56 aa2.41□□□□□ -2.02
NEB-201ENST00000172853 MRPS12O15235 138 aaKnown RBP2.41□□□□□ -2.02
NEB-201ENST00000172853 CHTF8P0CG12 524 aa2.41□□□□□ -2.02
NEB-201ENST00000172853 ODF3L2Q3SX64 289 aa2.41□□□□□ -2.02
NEB-201ENST00000172853 MRPL34Q9BQ48 92 aaKnown RBP2.41□□□□□ -2.02
NEB-201ENST00000172853 PRO3102Q9H379 93 aa2.41□□□□□ -2.02
NEB-201ENST00000172853 LINC00574Q9H8X3 128 aa2.41□□□□□ -2.02
NEB-201ENST00000172853 RPS28P62857 69 aaKnown RBP2.41□□□□□ -2.02
NEB-201ENST00000172853 ZNF292O60281 2723 aa2.4□□□□□ -2.02
NEB-201ENST00000172853 ARHGAP32A7KAX9 2087 aa2.4□□□□□ -2.02
NEB-201ENST00000172853 GOLGB1Q14789 3259 aaKnown RBP2.4□□□□□ -2.02
NEB-201ENST00000172853 IGLV5-39A0A0G2JS06 123 aa2.4□□□□□ -2.02
NEB-201ENST00000172853 PIEZO2Q9H5I5 2752 aa2.4□□□□□ -2.03
NEB-201ENST00000172853 LINC00242Q5T6M2 205 aa2.4□□□□□ -2.03
NEB-201ENST00000172853 LINC01600Q96MT4 127 aa2.4□□□□□ -2.03
NEB-201ENST00000172853 C9orf92A6NGG3 77 aa2.4□□□□□ -2.03
NEB-201ENST00000172853 IGLV6-57P01721 117 aa2.4□□□□□ -2.03
NEB-201ENST00000172853 KRTAP10-9P60411 292 aa2.4□□□□□ -2.03
NEB-201ENST00000172853 PLAC4Q8WY50 150 aa2.4□□□□□ -2.03
NEB-201ENST00000172853 Q9UF83 564 aa2.4□□□□□ -2.03
NEB-201ENST00000172853 ZNF575Q86XF7 245 aa2.39□□□□□ -2.03
NEB-201ENST00000172853 POLR2KP53803 58 aaKnown RBP2.39□□□□□ -2.03
NEB-201ENST00000172853 ST20-AS1Q8NBB2 130 aa2.39□□□□□ -2.03
NEB-201ENST00000172853 Q6ZQT0 140 aa2.39□□□□□ -2.03
NEB-201ENST00000172853 ZNF295-AS1Q8N0V1 137 aa2.39□□□□□ -2.03
NEB-201ENST00000172853 LINC00588Q9Y4M8 146 aa2.39□□□□□ -2.03
NEB-201ENST00000172853 CRIP3Q6Q6R5 217 aa2.39□□□□□ -2.03
NEB-201ENST00000172853 CDC42SE1Q9NRR8 79 aa2.39□□□□□ -2.03
NEB-201ENST00000172853 COL4A2P08572 1712 aa2.39□□□□□ -2.03
NEB-201ENST00000172853 KRTAP24-1Q3LI83 254 aa2.39□□□□□ -2.03
NEB-201ENST00000172853 ERC2-IT1O76042 136 aa2.38□□□□□ -2.03
NEB-201ENST00000172853 SMIM29Q86T20 159 aa2.38□□□□□ -2.03
NEB-201ENST00000172853 TRANK1O15050 2925 aa2.38□□□□□ -2.03
NEB-201ENST00000172853 LINC00528Q8N1L1 170 aa2.38□□□□□ -2.03
NEB-201ENST00000172853 TM2D3Q9BRN9 247 aa2.38□□□□□ -2.03
NEB-201ENST00000172853 PRM2P04554 102 aa2.38□□□□□ -2.03
NEB-201ENST00000172853 SEC61BP60468 96 aaKnown RBP2.38□□□□□ -2.03
NEB-201ENST00000172853 PKD1L2Q7Z442 2459 aa2.38□□□□□ -2.03
NEB-201ENST00000172853 SMIM1B2RUZ4 78 aa2.38□□□□□ -2.03
NEB-201ENST00000172853 ANKHD1Q8IWZ3 2542 aaKnown RBP2.38□□□□□ -2.03
NEB-201ENST00000172853 CENPEQ02224 2701 aa2.38□□□□□ -2.03
NEB-201ENST00000172853 ZNF580Q9UK33 172 aa2.38□□□□□ -2.03
NEB-201ENST00000172853 SORL1Q92673 2214 aa2.38□□□□□ -2.03
NEB-201ENST00000172853 SMR3BP02814 79 aaPredicted RBP2.38□□□□□ -2.03
NEB-201ENST00000172853 C11orf72Q8NBR9 251 aa2.38□□□□□ -2.03
NEB-201ENST00000172853 SETD2Q9BYW2 2564 aaPredicted RBP2.38□□□□□ -2.03
NEB-201ENST00000172853 A0A087WYN8 130 aa2.38□□□□□ -2.03
NEB-201ENST00000172853 Q6ZPA2 131 aa2.38□□□□□ -2.03
NEB-201ENST00000172853 LINC00476Q8WZB0 136 aa2.38□□□□□ -2.03
NEB-201ENST00000172853 AGRNO00468 2067 aa2.38□□□□□ -2.03
NEB-201ENST00000172853 C10orf142B7Z368 130 aa2.38□□□□□ -2.03
NEB-201ENST00000172853 CENPFP49454 3210 aa2.37□□□□□ -2.03
NEB-201ENST00000172853 Q6ZS46 218 aa2.37□□□□□ -2.03
NEB-201ENST00000172853 CCDC168Q8NDH2 2452 aa2.37□□□□□ -2.03
NEB-201ENST00000172853 PRR3P79522 188 aaKnown RBP2.37□□□□□ -2.03
NEB-201ENST00000172853 PRRC2CQ9Y520 2896 aaKnown RBP2.37□□□□□ -2.03
NEB-201ENST00000172853 IGLV5-48A0A075B6I7 105 aa2.37□□□□□ -2.03
NEB-201ENST00000172853 MIR22HGQ0VDD5 57 aa2.37□□□□□ -2.03
NEB-201ENST00000172853 USP9YO00507 2555 aaPredicted RBP2.37□□□□□ -2.03
NEB-201ENST00000172853 DSCR10P59022 87 aa2.37□□□□□ -2.03
NEB-201ENST00000172853 WISP2O76076 250 aa2.37□□□□□ -2.03
NEB-201ENST00000172853 IGLV7-46A0A075B6I9 117 aa2.37□□□□□ -2.03
NEB-201ENST00000172853 A8MUN3 132 aa2.37□□□□□ -2.03
NEB-201ENST00000172853 TLX1NBP0CAT3 122 aa2.37□□□□□ -2.03
NEB-201ENST00000172853 A8MWP4 228 aa2.37□□□□□ -2.03
NEB-201ENST00000172853 MUC22E2RYF6 1773 aaPredicted RBP2.36□□□□□ -2.03
NEB-201ENST00000172853 ABCA2Q9BZC7 2435 aa2.36□□□□□ -2.03
NEB-201ENST00000172853 KTN1-AS1Q86SY8 53 aa2.36□□□□□ -2.03
NEB-201ENST00000172853 LITAFQ99732 161 aa2.36□□□□□ -2.03
NEB-201ENST00000172853 A0A087WVE0 104 aa2.36□□□□□ -2.03
NEB-201ENST00000172853 UTRNP46939 3433 aa2.36□□□□□ -2.03
NEB-201ENST00000172853 OBSCN-AS1Q96MR7 158 aa2.36□□□□□ -2.03
NEB-201ENST00000172853 SMCPP49901 116 aaPredicted RBP2.36□□□□□ -2.03
NEB-201ENST00000172853 AMELXQ99217 191 aa2.36□□□□□ -2.03
NEB-201ENST00000172853 A0A1W2PNU3 283 aaPredicted RBP2.36□□□□□ -2.03
NEB-201ENST00000172853 AVPP01185 164 aa2.36□□□□□ -2.03
NEB-201ENST00000172853 USP9XQ93008 2570 aaPredicted RBP2.36□□□□□ -2.03
NEB-201ENST00000172853 ZNF861PO60384 105 aa2.35□□□□□ -2.03
NEB-201ENST00000172853 CRIP1P50238 77 aa2.35□□□□□ -2.03
NEB-201ENST00000172853 GAS8-AS1O95177 125 aa2.35□□□□□ -2.03
NEB-201ENST00000172853 Q5VSD8 79 aa2.35□□□□□ -2.03
NEB-201ENST00000172853 IGLV1-50A0A075B6I6 118 aa2.35□□□□□ -2.03
NEB-201ENST00000172853 A0A0A0MQY5 61 aa2.35□□□□□ -2.03
NEB-201ENST00000172853 CEP350Q5VT06 3117 aa2.35□□□□□ -2.03
NEB-201ENST00000172853 IGLV5-45A0A087WSX0 123 aa2.35□□□□□ -2.03
NEB-201ENST00000172853 ABCA12Q86UK0 2595 aa2.35□□□□□ -2.03
NEB-201ENST00000172853 CYP4F30PQ9H0H9 118 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms