RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 PFN2P35080 140 aa13.09□□□□□ -0.31
TNFRSF1A-201ENST00000162749 UBE2DNLQ8IWF7 75 aa13.09□□□□□ -0.31
TNFRSF1A-201ENST00000162749 LINC00158P58513 81 aa13.09□□□□□ -0.31
TNFRSF1A-201ENST00000162749 DNAH10Q8IVF4 4471 aa13.09□□□□□ -0.31
TNFRSF1A-201ENST00000162749 C15orf56Q8N910 161 aa13.08□□□□□ -0.32
TNFRSF1A-201ENST00000162749 NTN5Q8WTR8 489 aaPredicted RBP13.08□□□□□ -0.32
TNFRSF1A-201ENST00000162749 C10orf25Q5T742 122 aa13.07□□□□□ -0.32
TNFRSF1A-201ENST00000162749 UNQ6190/PRO20217Q6UXQ8 127 aa13.06□□□□□ -0.32
TNFRSF1A-201ENST00000162749 IGKV2-28A0A075B6P5 120 aa13.05□□□□□ -0.32
TNFRSF1A-201ENST00000162749 IGKV2D-28P01615 120 aa13.05□□□□□ -0.32
TNFRSF1A-201ENST00000162749 KRTAP1-5Q9BYS1 174 aa13.05□□□□□ -0.32
TNFRSF1A-201ENST00000162749 VPS13DQ5THJ4 4388 aa13.05□□□□□ -0.32
TNFRSF1A-201ENST00000162749 HIGD2BQ4VC39 106 aa13.05□□□□□ -0.32
TNFRSF1A-201ENST00000162749 C9orf116Q5BN46 136 aaPredicted RBP13.05□□□□□ -0.32
TNFRSF1A-201ENST00000162749 SND1-IT1Q9HBX3 110 aa13.05□□□□□ -0.32
TNFRSF1A-201ENST00000162749 LINC00337Q8N6G1 96 aa13.04□□□□□ -0.32
TNFRSF1A-201ENST00000162749 ZNF561-AS1K7EIQ3 104 aa13.04□□□□□ -0.32
TNFRSF1A-201ENST00000162749 COX17Q14061 63 aa13.04□□□□□ -0.32
TNFRSF1A-201ENST00000162749 TEX49A0A1B0GTD5 131 aa13.03□□□□□ -0.32
TNFRSF1A-201ENST00000162749 H3BT86 120 aa13.03□□□□□ -0.32
TNFRSF1A-201ENST00000162749 ANAPC13Q9BS18 74 aa13.03□□□□□ -0.32
TNFRSF1A-201ENST00000162749 TRAV13-2A0A0B4J235 113 aa13.01□□□□□ -0.33
TNFRSF1A-201ENST00000162749 RMI2Q96E14 147 aa13.01□□□□□ -0.33
TNFRSF1A-201ENST00000162749 GVQW2A0A096LPI5 108 aaPredicted RBP13□□□□□ -0.33
TNFRSF1A-201ENST00000162749 CASC10Q5T4H9 136 aa13□□□□□ -0.33
TNFRSF1A-201ENST00000162749 C6orf48Q9UBA6 75 aa13□□□□□ -0.33
TNFRSF1A-201ENST00000162749 RPL28P46779 137 aaKnown RBP12.98□□□□□ -0.33
TNFRSF1A-201ENST00000162749 CAMK2N2Q96S95 79 aa12.98□□□□□ -0.33
TNFRSF1A-201ENST00000162749 FAM218AQ96MZ4 157 aa12.98□□□□□ -0.33
TNFRSF1A-201ENST00000162749 C2orf48Q96LS8 159 aa12.97□□□□□ -0.33
TNFRSF1A-201ENST00000162749 SS18L2Q9UHA2 77 aa12.97□□□□□ -0.33
TNFRSF1A-201ENST00000162749 KMT2AQ03164 3969 aa12.96□□□□□ -0.33
TNFRSF1A-201ENST00000162749 Q6ZRU5 148 aa12.96□□□□□ -0.34
TNFRSF1A-201ENST00000162749 USP17L23D6RBM5 183 aa12.94□□□□□ -0.34
TNFRSF1A-201ENST00000162749 MUC7Q8TAX7 377 aa12.94□□□□□ -0.34
TNFRSF1A-201ENST00000162749 SMIM11BQ8TCY0 68 aa12.94□□□□□ -0.34
TNFRSF1A-201ENST00000162749 TRACP01848 142 aa12.93□□□□□ -0.34
TNFRSF1A-201ENST00000162749 NBDYA0A0U1RRE5 68 aa12.92□□□□□ -0.34
TNFRSF1A-201ENST00000162749 F8WDY8 70 aa12.91□□□□□ -0.34
TNFRSF1A-201ENST00000162749 LECT2O14960 151 aa12.9□□□□□ -0.34
TNFRSF1A-201ENST00000162749 TTC32Q5I0X7 151 aa12.9□□□□□ -0.34
TNFRSF1A-201ENST00000162749 SYCNQ0VAF6 134 aa12.9□□□□□ -0.34
TNFRSF1A-201ENST00000162749 B5MCH6 92 aa12.89□□□□□ -0.35
TNFRSF1A-201ENST00000162749 SNCGO76070 127 aa12.89□□□□□ -0.35
TNFRSF1A-201ENST00000162749 C22orf24Q9Y442 160 aa12.89□□□□□ -0.35
TNFRSF1A-201ENST00000162749 SLPIP03973 132 aa12.88□□□□□ -0.35
TNFRSF1A-201ENST00000162749 GAGE2BQ13066 116 aa12.88□□□□□ -0.35
TNFRSF1A-201ENST00000162749 GAGE2EQ4V326 116 aa12.88□□□□□ -0.35
TNFRSF1A-201ENST00000162749 GAGE2DQ9UEU5 116 aa12.88□□□□□ -0.35
TNFRSF1A-201ENST00000162749 NDUFC2O95298 119 aa12.86□□□□□ -0.35
TNFRSF1A-201ENST00000162749 BAALC-AS2P0C853 105 aa12.86□□□□□ -0.35
TNFRSF1A-201ENST00000162749 Q8NDZ9 215 aa12.86□□□□□ -0.35
TNFRSF1A-201ENST00000162749 OR13C6PQ8NH95 151 aa12.86□□□□□ -0.35
TNFRSF1A-201ENST00000162749 WWC2-AS2Q96NR7 200 aa12.86□□□□□ -0.35
TNFRSF1A-201ENST00000162749 A0A087WYN8 130 aa12.86□□□□□ -0.35
TNFRSF1A-201ENST00000162749 NDUFC2-KCTD14E9PQ53 114 aa12.86□□□□□ -0.35
TNFRSF1A-201ENST00000162749 PSCAO43653 123 aa12.86□□□□□ -0.35
TNFRSF1A-201ENST00000162749 NDUFV3P56181 108 aaKnown RBP12.86□□□□□ -0.35
TNFRSF1A-201ENST00000162749 PRR3P79522 188 aaKnown RBP12.86□□□□□ -0.35
TNFRSF1A-201ENST00000162749 XAGE1AQ9HD64 81 aa12.85□□□□□ -0.35
TNFRSF1A-201ENST00000162749 H0YGX0 51 aa12.83□□□□□ -0.36
TNFRSF1A-201ENST00000162749 Q6ZRP5 223 aa12.82□□□□□ -0.36
TNFRSF1A-201ENST00000162749 DNAH2Q9P225 4427 aa12.82□□□□□ -0.36
TNFRSF1A-201ENST00000162749 M0R2N4 97 aa12.81□□□□□ -0.36
TNFRSF1A-201ENST00000162749 Q6Q795 121 aa12.81□□□□□ -0.36
TNFRSF1A-201ENST00000162749 Q6ZRN7 208 aaPredicted RBP12.81□□□□□ -0.36
TNFRSF1A-201ENST00000162749 CCDC179H3BU77 68 aa12.8□□□□□ -0.36
TNFRSF1A-201ENST00000162749 FAM240AA0A1B0GVK7 77 aa12.79□□□□□ -0.36
TNFRSF1A-201ENST00000162749 NCR3O14931 201 aa12.78□□□□□ -0.36
TNFRSF1A-201ENST00000162749 TLX1NBP0CAT3 122 aa12.78□□□□□ -0.36
TNFRSF1A-201ENST00000162749 DNAL4O96015 105 aa12.76□□□□□ -0.37
TNFRSF1A-201ENST00000162749 DNAH6Q9C0G6 4158 aa12.76□□□□□ -0.37
TNFRSF1A-201ENST00000162749 LRCOL1A6NCL2 159 aa12.75□□□□□ -0.37
TNFRSF1A-201ENST00000162749 RPL18AQ02543 176 aaKnown RBP12.75□□□□□ -0.37
TNFRSF1A-201ENST00000162749 Q6ZR54 194 aa12.75□□□□□ -0.37
TNFRSF1A-201ENST00000162749 C9orf129Q5T035 196 aaKnown RBP12.74□□□□□ -0.37
TNFRSF1A-201ENST00000162749 TMEM126AQ9H061 195 aa12.74□□□□□ -0.37
TNFRSF1A-201ENST00000162749 CNBPP62633 177 aaKnown RBP12.73□□□□□ -0.37
TNFRSF1A-201ENST00000162749 VPREB1P12018 145 aa12.73□□□□□ -0.37
TNFRSF1A-201ENST00000162749 C14orf177Q52M58 125 aa12.73□□□□□ -0.37
TNFRSF1A-201ENST00000162749 ALMS1Q8TCU4 4167 aa12.72□□□□□ -0.37
TNFRSF1A-201ENST00000162749 LY6G6CO95867 125 aa12.72□□□□□ -0.37
TNFRSF1A-201ENST00000162749 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.71□□□□□ -0.37
TNFRSF1A-201ENST00000162749 S100A7L2Q5SY68 101 aa12.71□□□□□ -0.37
TNFRSF1A-201ENST00000162749 LINC00476Q8WZB0 136 aa12.71□□□□□ -0.37
TNFRSF1A-201ENST00000162749 HECTD4Q9Y4D8 3996 aa12.71□□□□□ -0.38
TNFRSF1A-201ENST00000162749 SMIM20Q8N5G0 67 aa12.7□□□□□ -0.38
TNFRSF1A-201ENST00000162749 IGLV6-57P01721 117 aa12.69□□□□□ -0.38
TNFRSF1A-201ENST00000162749 C3orf84H3BNL1 204 aa12.69□□□□□ -0.38
TNFRSF1A-201ENST00000162749 ACYP1P07311 99 aa12.69□□□□□ -0.38
TNFRSF1A-201ENST00000162749 LOC107984640A0A0U1RRK4 108 aa12.68□□□□□ -0.38
TNFRSF1A-201ENST00000162749 LINC00167Q96N53 147 aa12.68□□□□□ -0.38
TNFRSF1A-201ENST00000162749 INAFM2P0DMQ5 153 aa12.68□□□□□ -0.38
TNFRSF1A-201ENST00000162749 OBSCN-AS1Q96MR7 158 aa12.68□□□□□ -0.38
TNFRSF1A-201ENST00000162749 TRBV10-3A0A0K0K1G6 114 aa12.66□□□□□ -0.38
TNFRSF1A-201ENST00000162749 C6orf99Q4VX62 202 aa12.66□□□□□ -0.38
TNFRSF1A-201ENST00000162749 Q8N814 137 aa12.66□□□□□ -0.38
TNFRSF1A-201ENST00000162749 HYDINQ4G0P3 5121 aa12.66□□□□□ -0.38
TNFRSF1A-201ENST00000162749 SERTAD4-AS1Q5TG53 156 aa12.66□□□□□ -0.38
TNFRSF1A-201ENST00000162749 SMCR5Q8TEV8 140 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms