RNA–Protein interactions for RNA: ENST00000641339.1

RGPD1-205, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

Gene RGPD1, Length 562 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-205ENST00000641339 PDZD11Q5EBL8 140 aa10.31□□□□□ -0.76
RGPD1-205ENST00000641339 C7orf33Q8WU49 177 aa10.31□□□□□ -0.76
RGPD1-205ENST00000641339 RAB5BP61020 215 aa10.3□□□□□ -0.76
RGPD1-205ENST00000641339 C9orf116Q5BN46 136 aaPredicted RBP10.3□□□□□ -0.76
RGPD1-205ENST00000641339 Q8IZM0 81 aa10.3□□□□□ -0.76
RGPD1-205ENST00000641339 TRBV30A0A0K0K1B3 111 aa10.29□□□□□ -0.76
RGPD1-205ENST00000641339 SMIM1B2RUZ4 78 aa10.29□□□□□ -0.76
RGPD1-205ENST00000641339 HBDP02042 147 aa10.29□□□□□ -0.76
RGPD1-205ENST00000641339 C6orf226Q5I0X4 101 aa10.29□□□□□ -0.76
RGPD1-205ENST00000641339 LINC00469Q8N7U9 141 aa10.29□□□□□ -0.76
RGPD1-205ENST00000641339 TOMM7Q9P0U1 55 aa10.29□□□□□ -0.76
RGPD1-205ENST00000641339 PRSS2P07478 247 aa10.28□□□□□ -0.76
RGPD1-205ENST00000641339 PACRGQ96M98 296 aaPredicted RBP10.27□□□□□ -0.77
RGPD1-205ENST00000641339 FAM168BA1KXE4 195 aa10.26□□□□□ -0.77
RGPD1-205ENST00000641339 TRGC2P03986 189 aa10.26□□□□□ -0.77
RGPD1-205ENST00000641339 CKS1BP61024 79 aa10.26□□□□□ -0.77
RGPD1-205ENST00000641339 PRR3P79522 188 aaKnown RBP10.26□□□□□ -0.77
RGPD1-205ENST00000641339 CHCHD1Q96BP2 118 aaKnown RBP10.26□□□□□ -0.77
RGPD1-205ENST00000641339 COLCA2A8K830 154 aa10.25□□□□□ -0.77
RGPD1-205ENST00000641339 NDUFC2-KCTD14E9PQ53 114 aa10.25□□□□□ -0.77
RGPD1-205ENST00000641339 IGLC3P0DOY3 106 aa10.25□□□□□ -0.77
RGPD1-205ENST00000641339 GAGE2EQ4V326 116 aa10.25□□□□□ -0.77
RGPD1-205ENST00000641339 KRTAP7-1Q8IUC3 87 aa10.25□□□□□ -0.77
RGPD1-205ENST00000641339 GAGE2DQ9UEU5 116 aa10.25□□□□□ -0.77
RGPD1-205ENST00000641339 ATP5LO75964 103 aa10.24□□□□□ -0.77
RGPD1-205ENST00000641339 OXTP01178 125 aa10.24□□□□□ -0.77
RGPD1-205ENST00000641339 SPINK8P0C7L1 97 aa10.24□□□□□ -0.77
RGPD1-205ENST00000641339 NDUFA6P56556 154 aa10.24□□□□□ -0.77
RGPD1-205ENST00000641339 F8VRH5 84 aa10.23□□□□□ -0.77
RGPD1-205ENST00000641339 C9orf129Q5T035 196 aaKnown RBP10.23□□□□□ -0.77
RGPD1-205ENST00000641339 PHF5AQ7RTV0 110 aaKnown RBP10.23□□□□□ -0.77
RGPD1-205ENST00000641339 COX7B2Q8TF08 81 aa10.23□□□□□ -0.77
RGPD1-205ENST00000641339 ZNF22P17026 224 aaPredicted RBP10.21□□□□□ -0.77
RGPD1-205ENST00000641339 CXCL5P42830 114 aa10.21□□□□□ -0.77
RGPD1-205ENST00000641339 BAGE3Q86Y29 109 aa10.21□□□□□ -0.77
RGPD1-205ENST00000641339 IGLV5-39A0A0G2JS06 123 aa10.2□□□□□ -0.78
RGPD1-205ENST00000641339 LINC00310P59036 64 aa10.2□□□□□ -0.78
RGPD1-205ENST00000641339 SRSF9Q13242 221 aaKnown RBP eCLIP10.2□□□□□ -0.78
RGPD1-205ENST00000641339 C11orf86A6NJI1 115 aa10.19□□□□□ -0.78
RGPD1-205ENST00000641339 H3BRM9 83 aa10.19□□□□□ -0.78
RGPD1-205ENST00000641339 FAM19A5Q7Z5A7 132 aaPredicted RBP10.19□□□□□ -0.78
RGPD1-205ENST00000641339 KRTAP11-1Q8IUC1 163 aa10.19□□□□□ -0.78
RGPD1-205ENST00000641339 FAM19A2Q8N3H0 131 aa10.19□□□□□ -0.78
RGPD1-205ENST00000641339 PSORS1C2Q9UIG4 136 aa10.19□□□□□ -0.78
RGPD1-205ENST00000641339 IFI27L1Q96BM0 104 aa10.18□□□□□ -0.78
RGPD1-205ENST00000641339 TRAV12-1A0A0B4J245 112 aa10.16□□□□□ -0.78
RGPD1-205ENST00000641339 NUPR1O60356 82 aa10.16□□□□□ -0.78
RGPD1-205ENST00000641339 HSBP1O75506 76 aa10.16□□□□□ -0.78
RGPD1-205ENST00000641339 SCO1O75880 301 aa10.16□□□□□ -0.78
RGPD1-205ENST00000641339 XAGE1AQ9HD64 81 aa10.16□□□□□ -0.78
RGPD1-205ENST00000641339 CHTOPQ9Y3Y2 248 aaKnown RBP10.16□□□□□ -0.78
RGPD1-205ENST00000641339 SERF1AO75920 110 aa10.15□□□□□ -0.78
RGPD1-205ENST00000641339 MT1HL1P0DM35 61 aa10.15□□□□□ -0.78
RGPD1-205ENST00000641339 SERTAD4-AS1Q5TG53 156 aa10.15□□□□□ -0.78
RGPD1-205ENST00000641339 SPINK6Q6UWN8 80 aa10.15□□□□□ -0.78
RGPD1-205ENST00000641339 M0QXV9 152 aa10.14□□□□□ -0.79
RGPD1-205ENST00000641339 TMEM170BQ5T4T1 132 aa10.14□□□□□ -0.79
RGPD1-205ENST00000641339 TNXBP22105 4242 aa10.14□□□□□ -0.79
RGPD1-205ENST00000641339 C1orf137Q5JT78 98 aa10.12□□□□□ -0.79
RGPD1-205ENST00000641339 C22orf24Q9Y442 160 aa10.12□□□□□ -0.79
RGPD1-205ENST00000641339 TMEM223A0PJW6 202 aa10.11□□□□□ -0.79
RGPD1-205ENST00000641339 ODF1Q14990 250 aa10.1□□□□□ -0.79
RGPD1-205ENST00000641339 LEPROTL1O95214 131 aa10.09□□□□□ -0.79
RGPD1-205ENST00000641339 ZNF625Q96I27 306 aaPredicted RBP10.09□□□□□ -0.79
RGPD1-205ENST00000641339 LINC01600Q96MT4 127 aa10.09□□□□□ -0.79
RGPD1-205ENST00000641339 IGLV7-43P04211 117 aa10.08□□□□□ -0.8
RGPD1-205ENST00000641339 PLA2G2DQ9UNK4 145 aa10.08□□□□□ -0.8
RGPD1-205ENST00000641339 PFN2P35080 140 aa10.07□□□□□ -0.8
RGPD1-205ENST00000641339 UBE2BP63146 152 aa10.07□□□□□ -0.8
RGPD1-205ENST00000641339 TP73-AS1Q9UF72 201 aa10.07□□□□□ -0.8
RGPD1-205ENST00000641339 H0Y8G0 127 aa10.06□□□□□ -0.8
RGPD1-205ENST00000641339 HIST1H2BKO60814 126 aa10.06□□□□□ -0.8
RGPD1-205ENST00000641339 HIST1H2BJP06899 126 aa10.06□□□□□ -0.8
RGPD1-205ENST00000641339 FABP4P15090 132 aa10.06□□□□□ -0.8
RGPD1-205ENST00000641339 HIST1H2BOP23527 126 aa10.06□□□□□ -0.8
RGPD1-205ENST00000641339 HIST1H2BBP33778 126 aa10.06□□□□□ -0.8
RGPD1-205ENST00000641339 HIST1H2BDP58876 126 aa10.06□□□□□ -0.8
RGPD1-205ENST00000641339 HIST1H2BCP62807 126 aa10.06□□□□□ -0.8
RGPD1-205ENST00000641339 HIST2H2BEQ16778 126 aa10.06□□□□□ -0.8
RGPD1-205ENST00000641339 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.06□□□□□ -0.8
RGPD1-205ENST00000641339 HIST1H2BHQ93079 126 aa10.06□□□□□ -0.8
RGPD1-205ENST00000641339 HIST1H2BNQ99877 126 aa10.06□□□□□ -0.8
RGPD1-205ENST00000641339 HIST1H2BMQ99879 126 aa10.06□□□□□ -0.8
RGPD1-205ENST00000641339 ERG28Q9UKR5 140 aa10.06□□□□□ -0.8
RGPD1-205ENST00000641339 COX17Q14061 63 aa10.05□□□□□ -0.8
RGPD1-205ENST00000641339 HSPB8Q9UJY1 196 aa10.05□□□□□ -0.8
RGPD1-205ENST00000641339 HMCN2Q8NDA2 5059 aa10.05□□□□□ -0.8
RGPD1-205ENST00000641339 IGLV5-37A0A075B6J1 123 aa10.04□□□□□ -0.8
RGPD1-205ENST00000641339 LBHQ53QV2 105 aaPredicted RBP10.04□□□□□ -0.8
RGPD1-205ENST00000641339 SFTA2Q6UW10 78 aa10.04□□□□□ -0.8
RGPD1-205ENST00000641339 REG3GQ6UW15 175 aa10.04□□□□□ -0.8
RGPD1-205ENST00000641339 MRPL55Q7Z7F7 128 aaKnown RBP10.04□□□□□ -0.8
RGPD1-205ENST00000641339 KRTAP10-8P60410 259 aa10.03□□□□□ -0.8
RGPD1-205ENST00000641339 LINC00167Q96N53 147 aa10.03□□□□□ -0.8
RGPD1-205ENST00000641339 SND1-IT1Q9HBX3 110 aa10.03□□□□□ -0.8
RGPD1-205ENST00000641339 PMCHL2Q9BQD1 86 aa10.01□□□□□ -0.81
RGPD1-205ENST00000641339 RPL37AP8A6NKH3 93 aa10□□□□□ -0.81
RGPD1-205ENST00000641339 Q8NDZ9 215 aa10□□□□□ -0.81
RGPD1-205ENST00000641339 H0Y9J4 135 aa9.99□□□□□ -0.81
RGPD1-205ENST00000641339 VPREB1P12018 145 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms