RNA–Protein interactions for RNA: ENST00000641314.1

PHGDH-214, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-214ENST00000641314 HIGD1BQ9P298 99 aa11.63□□□□□ -0.55
PHGDH-214ENST00000641314 CXCL5P42830 114 aa11.62□□□□□ -0.55
PHGDH-214ENST00000641314 HERV-K104P63124 156 aa11.62□□□□□ -0.55
PHGDH-214ENST00000641314 Q6ZR54 194 aa11.62□□□□□ -0.55
PHGDH-214ENST00000641314 MEIG1Q5JSS6 88 aa11.62□□□□□ -0.55
PHGDH-214ENST00000641314 SFTA2Q6UW10 78 aa11.61□□□□□ -0.55
PHGDH-214ENST00000641314 NTN5Q8WTR8 489 aaPredicted RBP11.61□□□□□ -0.55
PHGDH-214ENST00000641314 GVQW2A0A096LPI5 108 aaPredicted RBP11.6□□□□□ -0.55
PHGDH-214ENST00000641314 A0A0U1RRA0 63 aa11.6□□□□□ -0.55
PHGDH-214ENST00000641314 LINC00587B1AMM8 73 aa11.6□□□□□ -0.55
PHGDH-214ENST00000641314 UNQ6190/PRO20217Q6UXQ8 127 aa11.59□□□□□ -0.55
PHGDH-214ENST00000641314 HIST1H4GQ99525 98 aa11.59□□□□□ -0.55
PHGDH-214ENST00000641314 TMEM238C9JI98 176 aa11.58□□□□□ -0.55
PHGDH-214ENST00000641314 SRSF9Q13242 221 aaKnown RBP eCLIP11.58□□□□□ -0.55
PHGDH-214ENST00000641314 WFDC2Q14508 124 aa11.58□□□□□ -0.55
PHGDH-214ENST00000641314 C10orf25Q5T742 122 aa11.58□□□□□ -0.55
PHGDH-214ENST00000641314 Q6ZRN7 208 aaPredicted RBP11.58□□□□□ -0.55
PHGDH-214ENST00000641314 CAMK2N2Q96S95 79 aa11.58□□□□□ -0.55
PHGDH-214ENST00000641314 SMIM13P0DJ93 91 aa11.58□□□□□ -0.56
PHGDH-214ENST00000641314 CIRBPQ14011 172 aaKnown RBP11.58□□□□□ -0.56
PHGDH-214ENST00000641314 DNAH6Q9C0G6 4158 aa11.57□□□□□ -0.56
PHGDH-214ENST00000641314 DNAH10Q8IVF4 4471 aa11.57□□□□□ -0.56
PHGDH-214ENST00000641314 PFN2P35080 140 aa11.57□□□□□ -0.56
PHGDH-214ENST00000641314 HSD52Q0P140 79 aa11.57□□□□□ -0.56
PHGDH-214ENST00000641314 LITAFQ99732 161 aa11.57□□□□□ -0.56
PHGDH-214ENST00000641314 TIMM17BO60830 172 aa11.56□□□□□ -0.56
PHGDH-214ENST00000641314 HINT1P49773 126 aaPredicted RBP11.56□□□□□ -0.56
PHGDH-214ENST00000641314 ADAMTSL4-AS1Q5T5F5 129 aa11.56□□□□□ -0.56
PHGDH-214ENST00000641314 DAND5Q8N907 189 aa11.56□□□□□ -0.56
PHGDH-214ENST00000641314 C2orf48Q96LS8 159 aa11.56□□□□□ -0.56
PHGDH-214ENST00000641314 SPANXB1Q9NS25 103 aaPredicted RBP11.56□□□□□ -0.56
PHGDH-214ENST00000641314 ERG28Q9UKR5 140 aa11.56□□□□□ -0.56
PHGDH-214ENST00000641314 LINC00158P58513 81 aa11.55□□□□□ -0.56
PHGDH-214ENST00000641314 C9orf116Q5BN46 136 aaPredicted RBP11.55□□□□□ -0.56
PHGDH-214ENST00000641314 C1orf134Q5TEV5 83 aa11.55□□□□□ -0.56
PHGDH-214ENST00000641314 Q6ZRU5 148 aa11.55□□□□□ -0.56
PHGDH-214ENST00000641314 GCSHP23434 173 aa11.54□□□□□ -0.56
PHGDH-214ENST00000641314 NPC2P61916 151 aa11.54□□□□□ -0.56
PHGDH-214ENST00000641314 BATFQ16520 125 aa11.54□□□□□ -0.56
PHGDH-214ENST00000641314 TAL2Q16559 108 aa11.54□□□□□ -0.56
PHGDH-214ENST00000641314 C6orf48Q9UBA6 75 aa11.54□□□□□ -0.56
PHGDH-214ENST00000641314 KMT2AQ03164 3969 aa11.53□□□□□ -0.56
PHGDH-214ENST00000641314 F8WDY8 70 aa11.53□□□□□ -0.56
PHGDH-214ENST00000641314 SYCNQ0VAF6 134 aa11.53□□□□□ -0.56
PHGDH-214ENST00000641314 CEND1Q8N111 149 aa11.52□□□□□ -0.57
PHGDH-214ENST00000641314 SPANXDQ9BXN6 97 aa11.52□□□□□ -0.57
PHGDH-214ENST00000641314 SPANXCQ9NY87 97 aa11.52□□□□□ -0.57
PHGDH-214ENST00000641314 LRCOL1A6NCL2 159 aa11.51□□□□□ -0.57
PHGDH-214ENST00000641314 C14orf177Q52M58 125 aa11.51□□□□□ -0.57
PHGDH-214ENST00000641314 MIR7-3HGQ8N6C7 128 aa11.51□□□□□ -0.57
PHGDH-214ENST00000641314 CARD19Q96LW7 228 aa11.51□□□□□ -0.57
PHGDH-214ENST00000641314 TRBV30A0A0K0K1B3 111 aa11.5□□□□□ -0.57
PHGDH-214ENST00000641314 M0R143 59 aa11.5□□□□□ -0.57
PHGDH-214ENST00000641314 BVES-AS1Q5T3Y7 98 aa11.5□□□□□ -0.57
PHGDH-214ENST00000641314 LCE6AA0A183 80 aa11.5□□□□□ -0.57
PHGDH-214ENST00000641314 SLPIP03973 132 aa11.5□□□□□ -0.57
PHGDH-214ENST00000641314 MUSTN1Q8IVN3 82 aa11.5□□□□□ -0.57
PHGDH-214ENST00000641314 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.49□□□□□ -0.57
PHGDH-214ENST00000641314 EREGO14944 169 aa11.49□□□□□ -0.57
PHGDH-214ENST00000641314 PTTG1IPP53801 180 aa11.49□□□□□ -0.57
PHGDH-214ENST00000641314 Q6ZVH6 145 aa11.49□□□□□ -0.57
PHGDH-214ENST00000641314 SNHG12Q9BXW3 62 aa11.49□□□□□ -0.57
PHGDH-214ENST00000641314 HYDINQ4G0P3 5121 aa11.48□□□□□ -0.57
PHGDH-214ENST00000641314 FXYD2P54710 66 aa11.48□□□□□ -0.57
PHGDH-214ENST00000641314 COX17Q14061 63 aa11.48□□□□□ -0.57
PHGDH-214ENST00000641314 LINC00308Q8TCZ7 52 aa11.47□□□□□ -0.57
PHGDH-214ENST00000641314 EIF4EBP3O60516 100 aaPredicted RBP11.46□□□□□ -0.57
PHGDH-214ENST00000641314 A0A087WTM6 91 aa11.45□□□□□ -0.58
PHGDH-214ENST00000641314 IFITM1P13164 125 aa11.45□□□□□ -0.58
PHGDH-214ENST00000641314 SOSTDC1Q6X4U4 206 aa11.45□□□□□ -0.58
PHGDH-214ENST00000641314 RPL24P83731 157 aaKnown RBP11.45□□□□□ -0.58
PHGDH-214ENST00000641314 SACSQ9NZJ4 4579 aa11.44□□□□□ -0.58
PHGDH-214ENST00000641314 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.44□□□□□ -0.58
PHGDH-214ENST00000641314 RNF151Q2KHN1 245 aa11.44□□□□□ -0.58
PHGDH-214ENST00000641314 Q8N814 137 aa11.44□□□□□ -0.58
PHGDH-214ENST00000641314 DNAH2Q9P225 4427 aa11.44□□□□□ -0.58
PHGDH-214ENST00000641314 CNBPP62633 177 aaKnown RBP11.43□□□□□ -0.58
PHGDH-214ENST00000641314 COPS9Q8WXC6 57 aa11.43□□□□□ -0.58
PHGDH-214ENST00000641314 SND1-IT1Q9HBX3 110 aa11.43□□□□□ -0.58
PHGDH-214ENST00000641314 TMEM238LA0A1B0GVL6 79 aa11.42□□□□□ -0.58
PHGDH-214ENST00000641314 A4D1N5 150 aa11.42□□□□□ -0.58
PHGDH-214ENST00000641314 A6NJY4 79 aa11.42□□□□□ -0.58
PHGDH-214ENST00000641314 NDUFC2-KCTD14E9PQ53 114 aa11.41□□□□□ -0.58
PHGDH-214ENST00000641314 RTL8CO15255 209 aa11.41□□□□□ -0.58
PHGDH-214ENST00000641314 RPL18AQ02543 176 aaKnown RBP11.41□□□□□ -0.58
PHGDH-214ENST00000641314 NHP2Q9NX24 153 aaKnown RBP11.41□□□□□ -0.58
PHGDH-214ENST00000641314 TNP2Q05952 138 aa11.41□□□□□ -0.58
PHGDH-214ENST00000641314 GAGE2EQ4V326 116 aa11.41□□□□□ -0.58
PHGDH-214ENST00000641314 GAGE2DQ9UEU5 116 aa11.41□□□□□ -0.58
PHGDH-214ENST00000641314 A6NDN8 102 aa11.4□□□□□ -0.58
PHGDH-214ENST00000641314 XAGE1AQ9HD64 81 aa11.4□□□□□ -0.58
PHGDH-214ENST00000641314 K7ERJ3 54 aa11.39□□□□□ -0.59
PHGDH-214ENST00000641314 Q6ZRP5 223 aa11.39□□□□□ -0.59
PHGDH-214ENST00000641314 LOC107984640A0A0U1RRK4 108 aa11.37□□□□□ -0.59
PHGDH-214ENST00000641314 TLX1NBP0CAT3 122 aa11.37□□□□□ -0.59
PHGDH-214ENST00000641314 DNAH17Q9UFH2 4485 aa11.37□□□□□ -0.59
PHGDH-214ENST00000641314 PPDPFQ9H3Y8 114 aa11.37□□□□□ -0.59
PHGDH-214ENST00000641314 CFC1BP0CG36 223 aa11.36□□□□□ -0.59
PHGDH-214ENST00000641314 CFC1P0CG37 223 aa11.36□□□□□ -0.59
PHGDH-214ENST00000641314 FUSP35637 526 aaKnown RBP eCLIP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms