RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, human

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCARB2-223	ENST00000640640	RNF183	Q96D59	192 aa		12.47	□□□□□ -0.41
SCARB2-223	ENST00000640640	UPK3B	Q9BT76	320 aa		12.47	□□□□□ -0.41
SCARB2-223	ENST00000640640	C9orf116	Q5BN46	136 aa	Predicted RBP	12.47	□□□□□ -0.41
SCARB2-223	ENST00000640640	WDFY4	Q6ZS81	3184 aa		12.46	□□□□□ -0.42
SCARB2-223	ENST00000640640	SMIM20	Q8N5G0	67 aa		12.46	□□□□□ -0.42
SCARB2-223	ENST00000640640		A0A1B0GUV1	79 aa		12.45	□□□□□ -0.42
SCARB2-223	ENST00000640640		A0A096LNI7	61 aa		12.45	□□□□□ -0.42
SCARB2-223	ENST00000640640	FHL3	Q13643	280 aa		12.45	□□□□□ -0.42
SCARB2-223	ENST00000640640	CCK	P06307	115 aa		12.44	□□□□□ -0.42
SCARB2-223	ENST00000640640	MP68	P56378	58 aa		12.44	□□□□□ -0.42
SCARB2-223	ENST00000640640	ZNF73	O43830	326 aa	Predicted RBP	12.43	□□□□□ -0.42
SCARB2-223	ENST00000640640	RPL28	P46779	137 aa	Known RBP	12.42	□□□□□ -0.42
SCARB2-223	ENST00000640640	XG	P55808	180 aa		12.42	□□□□□ -0.42
SCARB2-223	ENST00000640640	ATP5EP2	Q5VTU8	51 aa		12.42	□□□□□ -0.42
SCARB2-223	ENST00000640640	SCX	Q7RTU7	201 aa		12.42	□□□□□ -0.42
SCARB2-223	ENST00000640640	FLNA	P21333	2647 aa	Known RBP	12.41	□□□□□ -0.42
SCARB2-223	ENST00000640640	ENHO	Q6UWT2	76 aa		12.41	□□□□□ -0.42
SCARB2-223	ENST00000640640	FSHB	P01225	129 aa		12.41	□□□□□ -0.42
SCARB2-223	ENST00000640640	EGFEM1P	Q0D2K5	195 aa		12.41	□□□□□ -0.42
SCARB2-223	ENST00000640640	MGAM2	Q2M2H8	2515 aa		12.4	□□□□□ -0.42
SCARB2-223	ENST00000640640	PRR3	P79522	188 aa	Known RBP	12.4	□□□□□ -0.42
SCARB2-223	ENST00000640640		Q9UF83	564 aa		12.39	□□□□□ -0.43
SCARB2-223	ENST00000640640	NTM-AS1	Q6ZSK4	140 aa		12.39	□□□□□ -0.43
SCARB2-223	ENST00000640640	XIRP2	A4UGR9	3374 aa		12.39	□□□□□ -0.43
SCARB2-223	ENST00000640640		H0Y9J4	135 aa		12.38	□□□□□ -0.43
SCARB2-223	ENST00000640640	TMEM258	P61165	79 aa		12.38	□□□□□ -0.43
SCARB2-223	ENST00000640640	RPL37AP8	A6NKH3	93 aa		12.37	□□□□□ -0.43
SCARB2-223	ENST00000640640	UQCRQ	O14949	82 aa		12.37	□□□□□ -0.43
SCARB2-223	ENST00000640640	C20orf197	Q8N268	126 aa		12.37	□□□□□ -0.43
SCARB2-223	ENST00000640640	LOC107984640	A0A0U1RRK4	108 aa		12.36	□□□□□ -0.43
SCARB2-223	ENST00000640640	IMUP	Q9GZP8	106 aa		12.36	□□□□□ -0.43
SCARB2-223	ENST00000640640	CFAP46	Q8IYW2	2715 aa		12.36	□□□□□ -0.43
SCARB2-223	ENST00000640640	DHRS4-AS1	Q9P1J3	65 aa		12.36	□□□□□ -0.43
SCARB2-223	ENST00000640640	TRBV10-3	A0A0K0K1G6	114 aa		12.35	□□□□□ -0.43
SCARB2-223	ENST00000640640	C3orf84	H3BNL1	204 aa		12.35	□□□□□ -0.43
SCARB2-223	ENST00000640640	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	12.35	□□□□□ -0.43
SCARB2-223	ENST00000640640	LYPD5	Q6UWN5	251 aa		12.35	□□□□□ -0.43
SCARB2-223	ENST00000640640	ITPR3	Q14573	2671 aa		12.35	□□□□□ -0.43
SCARB2-223	ENST00000640640		M0R2N4	97 aa		12.35	□□□□□ -0.43
SCARB2-223	ENST00000640640	IGLV5-39	A0A0G2JS06	123 aa		12.34	□□□□□ -0.43
SCARB2-223	ENST00000640640	WFDC10B	Q8IUB3	73 aa		12.34	□□□□□ -0.43
SCARB2-223	ENST00000640640	IGHV3OR16-9	A0A0B4J2B5	98 aa		12.34	□□□□□ -0.43
SCARB2-223	ENST00000640640	C4orf48	Q5BLP8	95 aa		12.33	□□□□□ -0.44
SCARB2-223	ENST00000640640	C6orf223	Q8N319	242 aa		12.33	□□□□□ -0.44
SCARB2-223	ENST00000640640	ATR	Q13535	2644 aa		12.33	□□□□□ -0.44
SCARB2-223	ENST00000640640	HELZ2	Q9BYK8	2649 aa	Known RBP	12.33	□□□□□ -0.44
SCARB2-223	ENST00000640640	FAM240A	A0A1B0GVK7	77 aa		12.33	□□□□□ -0.44
SCARB2-223	ENST00000640640		Q8N814	137 aa		12.32	□□□□□ -0.44
SCARB2-223	ENST00000640640		A0A087WYN8	130 aa		12.31	□□□□□ -0.44
SCARB2-223	ENST00000640640	CELA1	Q9UNI1	258 aa		12.31	□□□□□ -0.44
SCARB2-223	ENST00000640640		J3KT08	172 aa		12.3	□□□□□ -0.44
SCARB2-223	ENST00000640640	CDH23	Q9H251	3354 aa		12.3	□□□□□ -0.44
SCARB2-223	ENST00000640640	USP17L23	D6RBM5	183 aa		12.3	□□□□□ -0.44
SCARB2-223	ENST00000640640	NDUFC2	O95298	119 aa		12.3	□□□□□ -0.44
SCARB2-223	ENST00000640640	LINC00337	Q8N6G1	96 aa		12.29	□□□□□ -0.44
SCARB2-223	ENST00000640640	PPDPF	Q9H3Y8	114 aa		12.29	□□□□□ -0.44
SCARB2-223	ENST00000640640	LINC01561	Q8N1V8	128 aa		12.29	□□□□□ -0.44
SCARB2-223	ENST00000640640	WFDC9	Q8NEX5	89 aa		12.29	□□□□□ -0.44
SCARB2-223	ENST00000640640	VPS13A	Q96RL7	3174 aa		12.28	□□□□□ -0.44
SCARB2-223	ENST00000640640	NDUFC2-KCTD14	E9PQ53	114 aa		12.28	□□□□□ -0.44
SCARB2-223	ENST00000640640	MAST4	O15021	2626 aa		12.27	□□□□□ -0.44
SCARB2-223	ENST00000640640	C3orf22	Q8N5N4	141 aa		12.26	□□□□□ -0.45
SCARB2-223	ENST00000640640	IGLV5-45	A0A087WSX0	123 aa		12.26	□□□□□ -0.45
SCARB2-223	ENST00000640640		X6R8D5	127 aa		12.26	□□□□□ -0.45
SCARB2-223	ENST00000640640	LRCOL1	A6NCL2	159 aa		12.24	□□□□□ -0.45
SCARB2-223	ENST00000640640	C2orf48	Q96LS8	159 aa		12.23	□□□□□ -0.45
SCARB2-223	ENST00000640640		A0A096LNT2	108 aa		12.23	□□□□□ -0.45
SCARB2-223	ENST00000640640	SERP2	Q8N6R1	65 aa		12.23	□□□□□ -0.45
SCARB2-223	ENST00000640640		Q6JHZ5	121 aa		12.23	□□□□□ -0.45
SCARB2-223	ENST00000640640		M0QXV9	152 aa		12.22	□□□□□ -0.45
SCARB2-223	ENST00000640640		Q6Q795	121 aa		12.21	□□□□□ -0.45
SCARB2-223	ENST00000640640		Q6ZRU5	148 aa		12.21	□□□□□ -0.45
SCARB2-223	ENST00000640640	MAP1A	P78559	2803 aa	Predicted RBP	12.21	□□□□□ -0.45
SCARB2-223	ENST00000640640	LY6G6C	O95867	125 aa		12.2	□□□□□ -0.46
SCARB2-223	ENST00000640640	LINC00474	Q9P2X8	69 aa		12.2	□□□□□ -0.46
SCARB2-223	ENST00000640640	NUPR2	A6NF83	97 aa		12.2	□□□□□ -0.46
SCARB2-223	ENST00000640640		A8MTW9	85 aa		12.19	□□□□□ -0.46
SCARB2-223	ENST00000640640	DSP	P15924	2871 aa	Known RBP	12.19	□□□□□ -0.46
SCARB2-223	ENST00000640640	PLAC8L1	A1L4L8	177 aa		12.18	□□□□□ -0.46
SCARB2-223	ENST00000640640	C7orf33	Q8WU49	177 aa		12.18	□□□□□ -0.46
SCARB2-223	ENST00000640640		F8WDY8	70 aa		12.17	□□□□□ -0.46
SCARB2-223	ENST00000640640	COX7C	P15954	63 aa		12.17	□□□□□ -0.46
SCARB2-223	ENST00000640640	CCDC179	H3BU77	68 aa		12.16	□□□□□ -0.46
SCARB2-223	ENST00000640640	SOSTDC1	Q6X4U4	206 aa		12.16	□□□□□ -0.46
SCARB2-223	ENST00000640640	IGKV4-1	P06312	121 aa		12.15	□□□□□ -0.46
SCARB2-223	ENST00000640640	LINC00575	Q6W349	94 aa		12.15	□□□□□ -0.46
SCARB2-223	ENST00000640640	ESRG	Q1W209	222 aa		12.15	□□□□□ -0.46
SCARB2-223	ENST00000640640	FAM19A3	Q7Z5A8	133 aa		12.14	□□□□□ -0.47
SCARB2-223	ENST00000640640	C1orf137	Q5JT78	98 aa		12.14	□□□□□ -0.47
SCARB2-223	ENST00000640640	FAM236D	A0A1B0GTK5	79 aa		12.14	□□□□□ -0.47
SCARB2-223	ENST00000640640	FAM236C	P0DP71	79 aa		12.14	□□□□□ -0.47
SCARB2-223	ENST00000640640		A0A087WVE0	104 aa		12.14	□□□□□ -0.47
SCARB2-223	ENST00000640640	C5orf47	Q569G3	176 aa		12.14	□□□□□ -0.47
SCARB2-223	ENST00000640640	WFDC13	Q8IUB5	93 aa		12.14	□□□□□ -0.47
SCARB2-223	ENST00000640640	SMCP	P49901	116 aa	Predicted RBP	12.13	□□□□□ -0.47
SCARB2-223	ENST00000640640	REG3G	Q6UW15	175 aa		12.13	□□□□□ -0.47
SCARB2-223	ENST00000640640	CHKB-CPT1B	H3BT56	60 aa		12.13	□□□□□ -0.47
SCARB2-223	ENST00000640640	KRTAP24-1	Q3LI83	254 aa		12.13	□□□□□ -0.47
SCARB2-223	ENST00000640640	LINC01556	Q5JQF7	62 aa		12.12	□□□□□ -0.47
SCARB2-223	ENST00000640640	ZNF706	Q9Y5V0	76 aa	Predicted RBP	12.12	□□□□□ -0.47

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